RNA–Protein interactions for RNA: ENST00000333194.8

PDE8B-202, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-202ENST00000333194 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
PDE8B-202ENST00000333194 SHROOM4Q9ULL8 1493 aa27.58■■■□□ 2.01
PDE8B-202ENST00000333194 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
PDE8B-202ENST00000333194 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
PDE8B-202ENST00000333194 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
PDE8B-202ENST00000333194 CCDC180Q9P1Z9 1646 aa26.51■■□□□ 1.83
PDE8B-202ENST00000333194 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
PDE8B-202ENST00000333194 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
PDE8B-202ENST00000333194 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
PDE8B-202ENST00000333194 DCAF1Q9Y4B6 1507 aa25.6■■□□□ 1.69
PDE8B-202ENST00000333194 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
PDE8B-202ENST00000333194 HRCP23327 699 aa25.37■■□□□ 1.65
PDE8B-202ENST00000333194 SCRIBQ14160 1630 aa25.35■■□□□ 1.65
PDE8B-202ENST00000333194 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
PDE8B-202ENST00000333194 ABCC9O60706 1549 aa25.22■■□□□ 1.63
PDE8B-202ENST00000333194 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
PDE8B-202ENST00000333194 EHMT2Q96KQ7 1210 aa25.12■■□□□ 1.61
PDE8B-202ENST00000333194 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
PDE8B-202ENST00000333194 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
PDE8B-202ENST00000333194 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
PDE8B-202ENST00000333194 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
PDE8B-202ENST00000333194 TRIM26Q12899 539 aaPredicted RBP24.75■■□□□ 1.55
PDE8B-202ENST00000333194 MROH2BQ7Z745 1585 aa24.72■■□□□ 1.55
PDE8B-202ENST00000333194 WIZO95785 1651 aa24.6■■□□□ 1.53
PDE8B-202ENST00000333194 NACADO15069 1562 aa24.59■■□□□ 1.53
PDE8B-202ENST00000333194 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
PDE8B-202ENST00000333194 PABPN1Q86U42 306 aaKnown RBP eCLIP24.21■■□□□ 1.47
PDE8B-202ENST00000333194 BAZ1AQ9NRL2 1556 aaPredicted RBP24.21■■□□□ 1.47
PDE8B-202ENST00000333194 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
PDE8B-202ENST00000333194 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
PDE8B-202ENST00000333194 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
PDE8B-202ENST00000333194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
PDE8B-202ENST00000333194 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
PDE8B-202ENST00000333194 UNC13AQ9UPW8 1703 aa24.02■■□□□ 1.44
PDE8B-202ENST00000333194 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
PDE8B-202ENST00000333194 SOGA1O94964 1423 aa23.99■■□□□ 1.43
PDE8B-202ENST00000333194 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
PDE8B-202ENST00000333194 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
PDE8B-202ENST00000333194 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
PDE8B-202ENST00000333194 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
PDE8B-202ENST00000333194 UBTFP17480 764 aaKnown RBP23.82■■□□□ 1.4
PDE8B-202ENST00000333194 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
PDE8B-202ENST00000333194 CSRNP3Q8WYN3 585 aa23.75■■□□□ 1.39
PDE8B-202ENST00000333194 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
PDE8B-202ENST00000333194 RANGAP1P46060 587 aaPredicted RBP23.68■■□□□ 1.38
PDE8B-202ENST00000333194 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
PDE8B-202ENST00000333194 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
PDE8B-202ENST00000333194 WRNQ14191 1432 aaPredicted RBP eCLIP23.58■■□□□ 1.37
PDE8B-202ENST00000333194 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
PDE8B-202ENST00000333194 HNRNPUL2Q1KMD3 747 aaKnown RBP23.47■■□□□ 1.35
PDE8B-202ENST00000333194 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
PDE8B-202ENST00000333194 ATAD2BQ9ULI0 1458 aa23.45■■□□□ 1.34
PDE8B-202ENST00000333194 EEA1Q15075 1411 aa23.41■■□□□ 1.34
PDE8B-202ENST00000333194 BAZ1BQ9UIG0 1483 aaKnown RBP23.39■■□□□ 1.33
PDE8B-202ENST00000333194 DIEXFQ68CQ4 756 aaKnown RBP23.38■■□□□ 1.33
PDE8B-202ENST00000333194 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
PDE8B-202ENST00000333194 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.32
PDE8B-202ENST00000333194 NEUROD1Q13562 356 aa23.33■■□□□ 1.32
PDE8B-202ENST00000333194 CLIP1P30622 1438 aa23.3■■□□□ 1.32
PDE8B-202ENST00000333194 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
PDE8B-202ENST00000333194 ACIN1Q9UKV3 1341 aaKnown RBP23.19■■□□□ 1.3
PDE8B-202ENST00000333194 KIF21BO75037 1637 aa23.17■■□□□ 1.3
PDE8B-202ENST00000333194 APLP2Q06481 763 aa23.13■■□□□ 1.29
PDE8B-202ENST00000333194 VPS8Q8N3P4 1428 aa23.13■■□□□ 1.29
PDE8B-202ENST00000333194 ZNF316A6NFI3 1004 aaPredicted RBP23.11■■□□□ 1.29
PDE8B-202ENST00000333194 YTHDC1Q96MU7 727 aaKnown RBP23.11■■□□□ 1.29
PDE8B-202ENST00000333194 GTF3C3Q9Y5Q9 886 aa23.06■■□□□ 1.28
PDE8B-202ENST00000333194 KANK4Q5T7N3 995 aaPredicted RBP23.06■■□□□ 1.28
PDE8B-202ENST00000333194 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
PDE8B-202ENST00000333194 MIER1Q8N108 512 aa22.98■■□□□ 1.27
PDE8B-202ENST00000333194 CUX1P39880 1505 aa22.96■■□□□ 1.27
PDE8B-202ENST00000333194 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
PDE8B-202ENST00000333194 PRXQ9BXM0 1461 aa22.91■■□□□ 1.26
PDE8B-202ENST00000333194 ITGAEP38570 1179 aa22.9■■□□□ 1.26
PDE8B-202ENST00000333194 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.26
PDE8B-202ENST00000333194 CENPBP07199 599 aaPredicted RBP22.89■■□□□ 1.25
PDE8B-202ENST00000333194 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
PDE8B-202ENST00000333194 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
PDE8B-202ENST00000333194 CFTRP13569 1480 aa22.76■■□□□ 1.23
PDE8B-202ENST00000333194 HMGXB3Q12766 1538 aa22.76■■□□□ 1.23
PDE8B-202ENST00000333194 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
PDE8B-202ENST00000333194 ERICH3Q5RHP9 1530 aa22.75■■□□□ 1.23
PDE8B-202ENST00000333194 P3H3Q8IVL6 736 aa22.73■■□□□ 1.23
PDE8B-202ENST00000333194 ARHGAP35Q9NRY4 1499 aa22.71■■□□□ 1.23
PDE8B-202ENST00000333194 CUX2O14529 1486 aa22.69■■□□□ 1.22
PDE8B-202ENST00000333194 IGF1RP08069 1367 aa22.66■■□□□ 1.22
PDE8B-202ENST00000333194 ATP1B4Q9UN42 357 aaPredicted RBP22.64■■□□□ 1.22
PDE8B-202ENST00000333194 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
PDE8B-202ENST00000333194 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
PDE8B-202ENST00000333194 PELP1Q8IZL8 1130 aaKnown RBP22.6■■□□□ 1.21
PDE8B-202ENST00000333194 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
PDE8B-202ENST00000333194 RRBP1Q9P2E9 1410 aaKnown RBP22.56■■□□□ 1.2
PDE8B-202ENST00000333194 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
PDE8B-202ENST00000333194 FGD5Q6ZNL6 1462 aa22.55■■□□□ 1.2
PDE8B-202ENST00000333194 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
PDE8B-202ENST00000333194 FAM50AQ14320 339 aaKnown RBP22.49■■□□□ 1.19
PDE8B-202ENST00000333194 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
PDE8B-202ENST00000333194 RAB3GAP2Q9H2M9 1393 aa22.47■■□□□ 1.19
PDE8B-202ENST00000333194 PHLDB1Q86UU1 1377 aa22.45■■□□□ 1.18
PDE8B-202ENST00000333194 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms