RNA–Protein interactions for RNA: ENST00000328895.8

GKN2-201, Transcript of gastrokine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN2, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN2-201ENST00000328895 AEBP2Q6ZN18 517 aaPredicted RBP31.12■■■□□ 2.57
GKN2-201ENST00000328895 CHIC1Q5VXU3 224 aa30.28■■■□□ 2.44
GKN2-201ENST00000328895 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
GKN2-201ENST00000328895 SENP3Q9H4L4 574 aaPredicted RBP26.42■■□□□ 1.82
GKN2-201ENST00000328895 FOXD1Q16676 465 aa24.55■■□□□ 1.52
GKN2-201ENST00000328895 PLPPR3Q6T4P5 718 aa24.55■■□□□ 1.52
GKN2-201ENST00000328895 ADRA2BP18089 450 aa23.55■■□□□ 1.36
GKN2-201ENST00000328895 PPP6R1Q9UPN7 881 aa23.55■■□□□ 1.36
GKN2-201ENST00000328895 PIAS4Q8N2W9 510 aaPredicted RBP23.16■■□□□ 1.3
GKN2-201ENST00000328895 MSH5O43196 834 aa22.66■■□□□ 1.22
GKN2-201ENST00000328895 PPP4R3CPQ6ZMV5 832 aa21.64■■□□□ 1.05
GKN2-201ENST00000328895 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
GKN2-201ENST00000328895 MAPK8IP2Q13387 824 aaPredicted RBP21.4■■□□□ 1.02
GKN2-201ENST00000328895 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
GKN2-201ENST00000328895 CNKSR2Q8WXI2 1034 aa21.04■□□□□ 0.96
GKN2-201ENST00000328895 KCNA4P22459 653 aa21.03■□□□□ 0.96
GKN2-201ENST00000328895 NCBP3Q53F19 620 aaKnown RBP21.03■□□□□ 0.96
GKN2-201ENST00000328895 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
GKN2-201ENST00000328895 NPM3O75607 178 aaKnown RBP20.72■□□□□ 0.91
GKN2-201ENST00000328895 RNF216Q9NWF9 866 aaPredicted RBP20.63■□□□□ 0.89
GKN2-201ENST00000328895 HOXD11P31277 338 aaPredicted RBP20.57■□□□□ 0.88
GKN2-201ENST00000328895 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
GKN2-201ENST00000328895 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
GKN2-201ENST00000328895 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
GKN2-201ENST00000328895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.74
GKN2-201ENST00000328895 SLC4A2P04920 1241 aa19.59■□□□□ 0.73
GKN2-201ENST00000328895 RNF39Q9H2S5 420 aa19.41■□□□□ 0.7
GKN2-201ENST00000328895 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
GKN2-201ENST00000328895 FOXD4L1Q9NU39 408 aa19.36■□□□□ 0.69
GKN2-201ENST00000328895 ZBTB22O15209 634 aa19.34■□□□□ 0.69
GKN2-201ENST00000328895 U3KPZ7 1027 aaPredicted RBP19.31■□□□□ 0.68
GKN2-201ENST00000328895 C1QBPQ07021 282 aaKnown RBP19.16■□□□□ 0.66
GKN2-201ENST00000328895 MYCNP04198 464 aaPredicted RBP19.15■□□□□ 0.66
GKN2-201ENST00000328895 CSRNP3Q8WYN3 585 aa19.13■□□□□ 0.65
GKN2-201ENST00000328895 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
GKN2-201ENST00000328895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
GKN2-201ENST00000328895 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
GKN2-201ENST00000328895 SAMD1Q6SPF0 538 aaPredicted RBP18.95■□□□□ 0.62
GKN2-201ENST00000328895 APLP2Q06481 763 aa18.84■□□□□ 0.61
GKN2-201ENST00000328895 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
GKN2-201ENST00000328895 CAPN15O75808 1086 aa18.79■□□□□ 0.6
GKN2-201ENST00000328895 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
GKN2-201ENST00000328895 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
GKN2-201ENST00000328895 ATXN8OSP0DMR3 200 aa18.66■□□□□ 0.58
GKN2-201ENST00000328895 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
GKN2-201ENST00000328895 ABCB7O75027 752 aa18.44■□□□□ 0.54
GKN2-201ENST00000328895 DSG3P32926 999 aa18.44■□□□□ 0.54
GKN2-201ENST00000328895 POLA2Q14181 598 aa18.33■□□□□ 0.52
GKN2-201ENST00000328895 ZBTB12Q9Y330 459 aaPredicted RBP17.97■□□□□ 0.47
GKN2-201ENST00000328895 FBLN2P98095 1184 aa17.89■□□□□ 0.45
GKN2-201ENST00000328895 MKRN4PQ13434 485 aaPredicted RBP17.83■□□□□ 0.44
GKN2-201ENST00000328895 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
GKN2-201ENST00000328895 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
GKN2-201ENST00000328895 SPDYE2BA6NHP3 402 aa17.48■□□□□ 0.39
GKN2-201ENST00000328895 SPDYE6P0CI01 402 aa17.48■□□□□ 0.39
GKN2-201ENST00000328895 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
GKN2-201ENST00000328895 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
GKN2-201ENST00000328895 SPDYE4A6NLX3 237 aa17.41■□□□□ 0.38
GKN2-201ENST00000328895 FKBP8Q14318 412 aa17.34■□□□□ 0.37
GKN2-201ENST00000328895 AKT1S1Q96B36 256 aa17.33■□□□□ 0.36
GKN2-201ENST00000328895 SSUH2Q9Y2M2 353 aa17.32■□□□□ 0.36
GKN2-201ENST00000328895 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
GKN2-201ENST00000328895 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
GKN2-201ENST00000328895 PROM2Q8N271 834 aa17.02■□□□□ 0.32
GKN2-201ENST00000328895 SPDYE1Q8NFV5 336 aaPredicted RBP17.01■□□□□ 0.31
GKN2-201ENST00000328895 PITPNM1O00562 1244 aa17■□□□□ 0.31
GKN2-201ENST00000328895 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
GKN2-201ENST00000328895 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
GKN2-201ENST00000328895 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
GKN2-201ENST00000328895 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
GKN2-201ENST00000328895 FBXO3Q9UK99 471 aa16.72■□□□□ 0.27
GKN2-201ENST00000328895 PIP4P2Q8N4L2 257 aa16.67■□□□□ 0.26
GKN2-201ENST00000328895 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
GKN2-201ENST00000328895 CHADLQ6NUI6 762 aa16.59■□□□□ 0.25
GKN2-201ENST00000328895 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
GKN2-201ENST00000328895 MIER1Q8N108 512 aa16.55■□□□□ 0.24
GKN2-201ENST00000328895 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
GKN2-201ENST00000328895 PLCD3Q8N3E9 789 aa16.52■□□□□ 0.24
GKN2-201ENST00000328895 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
GKN2-201ENST00000328895 POTEHQ6S545 545 aa16.49■□□□□ 0.23
GKN2-201ENST00000328895 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
GKN2-201ENST00000328895 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
GKN2-201ENST00000328895 MNX1P50219 401 aaPredicted RBP16.33■□□□□ 0.2
GKN2-201ENST00000328895 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
GKN2-201ENST00000328895 ZBTB47Q9UFB7 747 aaPredicted RBP16.29■□□□□ 0.2
GKN2-201ENST00000328895 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
GKN2-201ENST00000328895 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
GKN2-201ENST00000328895 HAX1O00165 279 aa16.2■□□□□ 0.18
GKN2-201ENST00000328895 C19orf67A6NJJ6 358 aa16.1■□□□□ 0.17
GKN2-201ENST00000328895 CD44P16070 742 aaKnown RBP16.1■□□□□ 0.17
GKN2-201ENST00000328895 SPOCK2Q92563 424 aa16.09■□□□□ 0.17
GKN2-201ENST00000328895 NUBP1P53384 320 aa16.08■□□□□ 0.16
GKN2-201ENST00000328895 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
GKN2-201ENST00000328895 TSPYL2Q9H2G4 693 aaPredicted RBP16.04■□□□□ 0.16
GKN2-201ENST00000328895 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
GKN2-201ENST00000328895 EVX2Q03828 476 aa16.03■□□□□ 0.16
GKN2-201ENST00000328895 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
GKN2-201ENST00000328895 FAM212AQ96EL1 285 aa15.98■□□□□ 0.15
GKN2-201ENST00000328895 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
GKN2-201ENST00000328895 CIZ1Q9ULV3 898 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms