RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.03
ZNF404-201ENST00000324394 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
ZNF404-201ENST00000324394 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
ZNF404-201ENST00000324394 PHF23Q9BUL5 403 aaPredicted RBP18.12■□□□□ 0.49
ZNF404-201ENST00000324394 FOXD1Q16676 465 aa17.24■□□□□ 0.35
ZNF404-201ENST00000324394 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
ZNF404-201ENST00000324394 MSH5O43196 834 aa16.45■□□□□ 0.22
ZNF404-201ENST00000324394 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
ZNF404-201ENST00000324394 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
ZNF404-201ENST00000324394 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
ZNF404-201ENST00000324394 ADRA2BP18089 450 aa15.54■□□□□ 0.08
ZNF404-201ENST00000324394 DMRT2Q9Y5R5 561 aa14.55□□□□□ -0.08
ZNF404-201ENST00000324394 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
ZNF404-201ENST00000324394 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
ZNF404-201ENST00000324394 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
ZNF404-201ENST00000324394 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
ZNF404-201ENST00000324394 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
ZNF404-201ENST00000324394 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
ZNF404-201ENST00000324394 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
ZNF404-201ENST00000324394 PPP4R3CPQ6ZMV5 832 aa13.58□□□□□ -0.24
ZNF404-201ENST00000324394 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
ZNF404-201ENST00000324394 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
ZNF404-201ENST00000324394 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
ZNF404-201ENST00000324394 KCNA4P22459 653 aa13.43□□□□□ -0.26
ZNF404-201ENST00000324394 POTEHQ6S545 545 aa13.23□□□□□ -0.29
ZNF404-201ENST00000324394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZNF404-201ENST00000324394 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
ZNF404-201ENST00000324394 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.33
ZNF404-201ENST00000324394 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
ZNF404-201ENST00000324394 DSG3P32926 999 aa12.84□□□□□ -0.35
ZNF404-201ENST00000324394 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
ZNF404-201ENST00000324394 CAPN15O75808 1086 aa12.78□□□□□ -0.36
ZNF404-201ENST00000324394 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
ZNF404-201ENST00000324394 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
ZNF404-201ENST00000324394 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
ZNF404-201ENST00000324394 APLP2Q06481 763 aa12.46□□□□□ -0.41
ZNF404-201ENST00000324394 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
ZNF404-201ENST00000324394 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
ZNF404-201ENST00000324394 ABCB7O75027 752 aa12.39□□□□□ -0.43
ZNF404-201ENST00000324394 ZBTB22O15209 634 aa12.39□□□□□ -0.43
ZNF404-201ENST00000324394 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
ZNF404-201ENST00000324394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.44
ZNF404-201ENST00000324394 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.44
ZNF404-201ENST00000324394 CHRDL2Q6WN34 429 aa12.25□□□□□ -0.45
ZNF404-201ENST00000324394 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
ZNF404-201ENST00000324394 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
ZNF404-201ENST00000324394 SAMD1Q6SPF0 538 aaPredicted RBP12.15□□□□□ -0.46
ZNF404-201ENST00000324394 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
ZNF404-201ENST00000324394 POLA2Q14181 598 aa11.94□□□□□ -0.5
ZNF404-201ENST00000324394 AKT1S1Q96B36 256 aa11.9□□□□□ -0.5
ZNF404-201ENST00000324394 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
ZNF404-201ENST00000324394 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
ZNF404-201ENST00000324394 HAX1O00165 279 aa11.78□□□□□ -0.52
ZNF404-201ENST00000324394 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
ZNF404-201ENST00000324394 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
ZNF404-201ENST00000324394 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
ZNF404-201ENST00000324394 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
ZNF404-201ENST00000324394 PITPNM1O00562 1244 aa11.63□□□□□ -0.55
ZNF404-201ENST00000324394 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
ZNF404-201ENST00000324394 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
ZNF404-201ENST00000324394 EVX2Q03828 476 aa11.51□□□□□ -0.57
ZNF404-201ENST00000324394 FKBP8Q14318 412 aa11.37□□□□□ -0.59
ZNF404-201ENST00000324394 LHX8Q68G74 356 aa11.36□□□□□ -0.59
ZNF404-201ENST00000324394 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
ZNF404-201ENST00000324394 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
ZNF404-201ENST00000324394 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
ZNF404-201ENST00000324394 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
ZNF404-201ENST00000324394 SPDYE2Q495Y8 402 aa11.3□□□□□ -0.6
ZNF404-201ENST00000324394 GABBR2O75899 941 aa11.28□□□□□ -0.6
ZNF404-201ENST00000324394 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
ZNF404-201ENST00000324394 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
ZNF404-201ENST00000324394 FBLN2P98095 1184 aa11.17□□□□□ -0.62
ZNF404-201ENST00000324394 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
ZNF404-201ENST00000324394 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
ZNF404-201ENST00000324394 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
ZNF404-201ENST00000324394 SSUH2Q9Y2M2 353 aa11.05□□□□□ -0.64
ZNF404-201ENST00000324394 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
ZNF404-201ENST00000324394 ZNF692Q9BU19 519 aaPredicted RBP11.03□□□□□ -0.64
ZNF404-201ENST00000324394 AMER1Q5JTC6 1135 aaPredicted RBP11.01□□□□□ -0.65
ZNF404-201ENST00000324394 POTEIP0CG38 1075 aa11□□□□□ -0.65
ZNF404-201ENST00000324394 CLCN6P51797 869 aa11□□□□□ -0.65
ZNF404-201ENST00000324394 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
ZNF404-201ENST00000324394 PRR29P0C7W0 189 aa10.96□□□□□ -0.65
ZNF404-201ENST00000324394 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
ZNF404-201ENST00000324394 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
ZNF404-201ENST00000324394 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
ZNF404-201ENST00000324394 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
ZNF404-201ENST00000324394 PROM2Q8N271 834 aa10.83□□□□□ -0.68
ZNF404-201ENST00000324394 FBXO3Q9UK99 471 aa10.79□□□□□ -0.68
ZNF404-201ENST00000324394 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
ZNF404-201ENST00000324394 OTUD5Q96G74 571 aa10.73□□□□□ -0.69
ZNF404-201ENST00000324394 POTEMA6NI47 508 aa10.72□□□□□ -0.69
ZNF404-201ENST00000324394 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
ZNF404-201ENST00000324394 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
ZNF404-201ENST00000324394 POTEGQ6S5H5 508 aa10.67□□□□□ -0.7
ZNF404-201ENST00000324394 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
ZNF404-201ENST00000324394 GALR2O43603 387 aaPredicted RBP10.62□□□□□ -0.71
ZNF404-201ENST00000324394 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
ZNF404-201ENST00000324394 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
ZNF404-201ENST00000324394 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms