RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
SNRNP200-201ENST00000323853 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
SNRNP200-201ENST00000323853 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
SNRNP200-201ENST00000323853 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
SNRNP200-201ENST00000323853 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
SNRNP200-201ENST00000323853 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
SNRNP200-201ENST00000323853 APLP2Q06481 763 aa17.06■□□□□ 0.32
SNRNP200-201ENST00000323853 FAM9AQ8IZU1 332 aaPredicted RBP16.95■□□□□ 0.3
SNRNP200-201ENST00000323853 PCGF6Q9BYE7 350 aa16.92■□□□□ 0.3
SNRNP200-201ENST00000323853 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
SNRNP200-201ENST00000323853 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
SNRNP200-201ENST00000323853 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
SNRNP200-201ENST00000323853 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
SNRNP200-201ENST00000323853 CCER1Q8TC90 406 aaPredicted RBP16.6■□□□□ 0.25
SNRNP200-201ENST00000323853 RANGAP1P46060 587 aaPredicted RBP16.59■□□□□ 0.25
SNRNP200-201ENST00000323853 UBTFP17480 764 aaKnown RBP16.46■□□□□ 0.23
SNRNP200-201ENST00000323853 ATP1B4Q9UN42 357 aaPredicted RBP16.42■□□□□ 0.22
SNRNP200-201ENST00000323853 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.22
SNRNP200-201ENST00000323853 TRIM26Q12899 539 aaPredicted RBP16.3■□□□□ 0.2
SNRNP200-201ENST00000323853 YTHDC1Q96MU7 727 aaKnown RBP16.26■□□□□ 0.19
SNRNP200-201ENST00000323853 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
SNRNP200-201ENST00000323853 NEFLP07196 543 aa16.19■□□□□ 0.18
SNRNP200-201ENST00000323853 HRCP23327 699 aa16.17■□□□□ 0.18
SNRNP200-201ENST00000323853 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
SNRNP200-201ENST00000323853 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
SNRNP200-201ENST00000323853 MYT1Q01538 1121 aa16.04■□□□□ 0.16
SNRNP200-201ENST00000323853 ITGAEP38570 1179 aa15.93■□□□□ 0.14
SNRNP200-201ENST00000323853 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
SNRNP200-201ENST00000323853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
SNRNP200-201ENST00000323853 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.11
SNRNP200-201ENST00000323853 DIEXFQ68CQ4 756 aaKnown RBP15.7■□□□□ 0.1
SNRNP200-201ENST00000323853 MYT1LQ9UL68 1186 aa15.69■□□□□ 0.1
SNRNP200-201ENST00000323853 DAXXQ9UER7 740 aaPredicted RBP15.67■□□□□ 0.1
SNRNP200-201ENST00000323853 ABCC9O60706 1549 aa15.65■□□□□ 0.1
SNRNP200-201ENST00000323853 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
SNRNP200-201ENST00000323853 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.08
SNRNP200-201ENST00000323853 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.086e-7■■□□□ 13.6
SNRNP200-201ENST00000323853 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
SNRNP200-201ENST00000323853 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
SNRNP200-201ENST00000323853 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
SNRNP200-201ENST00000323853 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
SNRNP200-201ENST00000323853 ZNF316A6NFI3 1004 aaPredicted RBP15.37■□□□□ 0.05
SNRNP200-201ENST00000323853 ANP32CO43423 234 aa15.36■□□□□ 0.05
SNRNP200-201ENST00000323853 RTL5Q5HYW3 569 aaPredicted RBP15.36■□□□□ 0.05
SNRNP200-201ENST00000323853 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
SNRNP200-201ENST00000323853 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
SNRNP200-201ENST00000323853 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
SNRNP200-201ENST00000323853 BCANQ96GW7 911 aa15.31■□□□□ 0.04
SNRNP200-201ENST00000323853 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
SNRNP200-201ENST00000323853 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
SNRNP200-201ENST00000323853 ZNF326Q5BKZ1 582 aaKnown RBP15.25■□□□□ 0.03
SNRNP200-201ENST00000323853 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
SNRNP200-201ENST00000323853 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
SNRNP200-201ENST00000323853 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-201ENST00000323853 P3H3Q8IVL6 736 aa15.17■□□□□ 0.02
SNRNP200-201ENST00000323853 FBLN2P98095 1184 aa15.14■□□□□ 0.01
SNRNP200-201ENST00000323853 ARID3CA6NKF2 412 aa15.07■□□□□ 0
SNRNP200-201ENST00000323853 CANXP27824 592 aaKnown RBP15.05■□□□□ -0
SNRNP200-201ENST00000323853 ZBTB47Q9UFB7 747 aaPredicted RBP15.02□□□□□ -0.01
SNRNP200-201ENST00000323853 ZNF777Q9ULD5 760 aaPredicted RBP15.01□□□□□ -0.01
SNRNP200-201ENST00000323853 TONSLQ96HA7 1378 aa14.99□□□□□ -0.01
SNRNP200-201ENST00000323853 ANP32AP39687 249 aaKnown RBP14.96□□□□□ -0.02
SNRNP200-201ENST00000323853 FKBP8Q14318 412 aa14.93□□□□□ -0.02
SNRNP200-201ENST00000323853 MYO15BQ96JP2 1530 aa14.92□□□□□ -0.02
SNRNP200-201ENST00000323853 NEFMP07197 916 aa14.91□□□□□ -0.02
SNRNP200-201ENST00000323853 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
SNRNP200-201ENST00000323853 NPM2Q86SE8 214 aaKnown RBP14.86□□□□□ -0.03
SNRNP200-201ENST00000323853 HNRNPUQ00839 825 aaKnown RBP eCLIP14.85□□□□□ -0.03
SNRNP200-201ENST00000323853 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
SNRNP200-201ENST00000323853 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
SNRNP200-201ENST00000323853 CLIP1P30622 1438 aa14.83□□□□□ -0.04
SNRNP200-201ENST00000323853 BCL11AQ9H165 835 aa14.83□□□□□ -0.04
SNRNP200-201ENST00000323853 FAM9BQ8IZU0 186 aa14.82□□□□□ -0.04
SNRNP200-201ENST00000323853 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
SNRNP200-201ENST00000323853 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
SNRNP200-201ENST00000323853 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
SNRNP200-201ENST00000323853 EEA1Q15075 1411 aa14.77□□□□□ -0.04
SNRNP200-201ENST00000323853 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
SNRNP200-201ENST00000323853 MTUS2Q5JR59 1369 aa14.74□□□□□ -0.05
SNRNP200-201ENST00000323853 MIER1Q8N108 512 aa14.73□□□□□ -0.05
SNRNP200-201ENST00000323853 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
SNRNP200-201ENST00000323853 CHGAP10645 457 aaKnown RBP14.72□□□□□ -0.05
SNRNP200-201ENST00000323853 NACADO15069 1562 aa14.7□□□□□ -0.06
SNRNP200-201ENST00000323853 TMC1Q8TDI8 760 aa14.7□□□□□ -0.06
SNRNP200-201ENST00000323853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.68□□□□□ -0.063e-7■■□□□ 12.3
SNRNP200-201ENST00000323853 UPF2Q9HAU5 1272 aaKnown RBP14.67□□□□□ -0.06
SNRNP200-201ENST00000323853 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
SNRNP200-201ENST00000323853 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
SNRNP200-201ENST00000323853 MRS2Q9HD23 443 aa14.67□□□□□ -0.06
SNRNP200-201ENST00000323853 STAG3Q9UJ98 1225 aa14.66□□□□□ -0.06
SNRNP200-201ENST00000323853 ESF1Q9H501 851 aaKnown RBP14.65□□□□□ -0.06
SNRNP200-201ENST00000323853 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.65□□□□□ -0.06
SNRNP200-201ENST00000323853 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
SNRNP200-201ENST00000323853 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
SNRNP200-201ENST00000323853 TNIKQ9UKE5 1360 aa14.63□□□□□ -0.07
SNRNP200-201ENST00000323853 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
SNRNP200-201ENST00000323853 KDM2AQ9Y2K7 1162 aa14.63□□□□□ -0.07
SNRNP200-201ENST00000323853 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
SNRNP200-201ENST00000323853 TSPY4P0CV99 314 aa14.62□□□□□ -0.07
SNRNP200-201ENST00000323853 TSPY10P0CW01 314 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms