RNA–Protein interactions for RNA: ENST00000320743.7

LRIG3-201, Transcript of leucine rich repeats and immunoglobulin like domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIG3, Length 4,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG3-201ENST00000320743 NISCHQ9Y2I1 1504 aa26.51■■□□□ 1.83
LRIG3-201ENST00000320743 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
LRIG3-201ENST00000320743 SUPT5HO00267 1087 aaKnown RBP24.97■■□□□ 1.59
LRIG3-201ENST00000320743 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
LRIG3-201ENST00000320743 EHMT2Q96KQ7 1210 aa24.13■■□□□ 1.45
LRIG3-201ENST00000320743 PCGF6Q9BYE7 350 aa24.04■■□□□ 1.44
LRIG3-201ENST00000320743 PPARGC1BQ86YN6 1023 aaKnown RBP23.76■■□□□ 1.39
LRIG3-201ENST00000320743 HRCP23327 699 aa23.67■■□□□ 1.38
LRIG3-201ENST00000320743 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
LRIG3-201ENST00000320743 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
LRIG3-201ENST00000320743 TTBK1Q5TCY1 1321 aaPredicted RBP23.18■■□□□ 1.3
LRIG3-201ENST00000320743 RANGAP1P46060 587 aaPredicted RBP22.85■■□□□ 1.25
LRIG3-201ENST00000320743 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
LRIG3-201ENST00000320743 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
LRIG3-201ENST00000320743 CHIC1Q5VXU3 224 aa22.66■■□□□ 1.22
LRIG3-201ENST00000320743 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
LRIG3-201ENST00000320743 MYT1Q01538 1121 aa22.63■■□□□ 1.21
LRIG3-201ENST00000320743 CENPBP07199 599 aaPredicted RBP22.58■■□□□ 1.2
LRIG3-201ENST00000320743 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
LRIG3-201ENST00000320743 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
LRIG3-201ENST00000320743 ZEB1P37275 1124 aaPredicted RBP22.54■■□□□ 1.2
LRIG3-201ENST00000320743 CCER1Q8TC90 406 aaPredicted RBP22.43■■□□□ 1.18
LRIG3-201ENST00000320743 GTF3C3Q9Y5Q9 886 aa22.41■■□□□ 1.18
LRIG3-201ENST00000320743 ABCC9O60706 1549 aa22.38■■□□□ 1.17
LRIG3-201ENST00000320743 UBTFP17480 764 aaKnown RBP22.36■■□□□ 1.17
LRIG3-201ENST00000320743 APLP2Q06481 763 aa22.35■■□□□ 1.17
LRIG3-201ENST00000320743 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
LRIG3-201ENST00000320743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
LRIG3-201ENST00000320743 ATP1B4Q9UN42 357 aaPredicted RBP22.14■■□□□ 1.13
LRIG3-201ENST00000320743 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.13
LRIG3-201ENST00000320743 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
LRIG3-201ENST00000320743 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
LRIG3-201ENST00000320743 ZCCHC6Q5VYS8 1495 aaKnown RBP22.09■■□□□ 1.13
LRIG3-201ENST00000320743 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
LRIG3-201ENST00000320743 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
LRIG3-201ENST00000320743 ITGAEP38570 1179 aa21.79■■□□□ 1.08
LRIG3-201ENST00000320743 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
LRIG3-201ENST00000320743 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
LRIG3-201ENST00000320743 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
LRIG3-201ENST00000320743 BCANQ96GW7 911 aa21.55■■□□□ 1.04
LRIG3-201ENST00000320743 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
LRIG3-201ENST00000320743 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
LRIG3-201ENST00000320743 NEFLP07196 543 aa21.27■■□□□ 1
LRIG3-201ENST00000320743 MIER1Q8N108 512 aa21.26■□□□□ 0.99
LRIG3-201ENST00000320743 CNGB1Q14028 1251 aaPredicted RBP21.25■□□□□ 0.99
LRIG3-201ENST00000320743 BCL11AQ9H165 835 aa21.23■□□□□ 0.99
LRIG3-201ENST00000320743 P3H3Q8IVL6 736 aa21.17■□□□□ 0.98
LRIG3-201ENST00000320743 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
LRIG3-201ENST00000320743 NACADO15069 1562 aa21.09■□□□□ 0.97
LRIG3-201ENST00000320743 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
LRIG3-201ENST00000320743 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
LRIG3-201ENST00000320743 ARID3CA6NKF2 412 aa21.06■□□□□ 0.96
LRIG3-201ENST00000320743 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
LRIG3-201ENST00000320743 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
LRIG3-201ENST00000320743 ANP32EQ9BTT0 268 aa21.04■□□□□ 0.96
LRIG3-201ENST00000320743 CECR2Q9BXF3 1484 aa20.96■□□□□ 0.95
LRIG3-201ENST00000320743 FKBP8Q14318 412 aa20.92■□□□□ 0.94
LRIG3-201ENST00000320743 FBLN2P98095 1184 aa20.83■□□□□ 0.93
LRIG3-201ENST00000320743 SUPT16HQ9Y5B9 1047 aaKnown RBP20.82■□□□□ 0.92
LRIG3-201ENST00000320743 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.92
LRIG3-201ENST00000320743 TRIM52Q96A61 297 aa20.74■□□□□ 0.91
LRIG3-201ENST00000320743 TSHZ2Q9NRE2 1034 aa20.7■□□□□ 0.9
LRIG3-201ENST00000320743 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
LRIG3-201ENST00000320743 NBR1Q14596 966 aa20.62■□□□□ 0.89
LRIG3-201ENST00000320743 ZNF326Q5BKZ1 582 aaKnown RBP20.62■□□□□ 0.89
LRIG3-201ENST00000320743 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
LRIG3-201ENST00000320743 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.89
LRIG3-201ENST00000320743 RTL5Q5HYW3 569 aaPredicted RBP20.56■□□□□ 0.88
LRIG3-201ENST00000320743 BAZ1AQ9NRL2 1556 aaPredicted RBP20.54■□□□□ 0.88
LRIG3-201ENST00000320743 HIRIP3Q9BW71 556 aaPredicted RBP20.52■□□□□ 0.88
LRIG3-201ENST00000320743 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.87
LRIG3-201ENST00000320743 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
LRIG3-201ENST00000320743 EIF5BO60841 1220 aaKnown RBP20.46■□□□□ 0.87
LRIG3-201ENST00000320743 RBM19Q9Y4C8 960 aaKnown RBP20.46■□□□□ 0.87
LRIG3-201ENST00000320743 SOGA1O94964 1423 aa20.45■□□□□ 0.86
LRIG3-201ENST00000320743 CHIC2Q9UKJ5 165 aa20.45■□□□□ 0.86
LRIG3-201ENST00000320743 WIZO95785 1651 aa20.44■□□□□ 0.86
LRIG3-201ENST00000320743 RTN4Q9NQC3 1192 aaKnown RBP20.43■□□□□ 0.86
LRIG3-201ENST00000320743 CEP162Q5TB80 1403 aa20.43■□□□□ 0.86
LRIG3-201ENST00000320743 CLSPNQ9HAW4 1339 aa20.42■□□□□ 0.86
LRIG3-201ENST00000320743 CLIP1P30622 1438 aa20.4■□□□□ 0.86
LRIG3-201ENST00000320743 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
LRIG3-201ENST00000320743 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
LRIG3-201ENST00000320743 ANP32CO43423 234 aa20.35■□□□□ 0.85
LRIG3-201ENST00000320743 KCNH8Q96L42 1107 aa20.34■□□□□ 0.85
LRIG3-201ENST00000320743 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
LRIG3-201ENST00000320743 SLC4A1APQ9BWU0 796 aaKnown RBP20.3■□□□□ 0.84
LRIG3-201ENST00000320743 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
LRIG3-201ENST00000320743 NPM2Q86SE8 214 aaKnown RBP20.28■□□□□ 0.84
LRIG3-201ENST00000320743 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
LRIG3-201ENST00000320743 DEKP35659 375 aaKnown RBP20.24■□□□□ 0.83
LRIG3-201ENST00000320743 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
LRIG3-201ENST00000320743 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.82
LRIG3-201ENST00000320743 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
LRIG3-201ENST00000320743 RRP7BPQ9NSQ0 103 aa20.17■□□□□ 0.82
LRIG3-201ENST00000320743 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
LRIG3-201ENST00000320743 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
LRIG3-201ENST00000320743 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
LRIG3-201ENST00000320743 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
LRIG3-201ENST00000320743 DAXXQ9UER7 740 aaPredicted RBP20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms