RNA–Protein interactions for RNA: ENST00000318312.11

BBS1-201, Transcript of Bardet-Biedl syndrome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BBS1, Length 3,423 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-201ENST00000318312 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
BBS1-201ENST00000318312 DCAF8L2P0C7V8 631 aa18.63■□□□□ 0.57
BBS1-201ENST00000318312 SHROOM4Q9ULL8 1493 aa18.51■□□□□ 0.55
BBS1-201ENST00000318312 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
BBS1-201ENST00000318312 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
BBS1-201ENST00000318312 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
BBS1-201ENST00000318312 ABCC9O60706 1549 aa17.64■□□□□ 0.41
BBS1-201ENST00000318312 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
BBS1-201ENST00000318312 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
BBS1-201ENST00000318312 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
BBS1-201ENST00000318312 NACADO15069 1562 aa16.94■□□□□ 0.3
BBS1-201ENST00000318312 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
BBS1-201ENST00000318312 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
BBS1-201ENST00000318312 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
BBS1-201ENST00000318312 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
BBS1-201ENST00000318312 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
BBS1-201ENST00000318312 LOC105371045A0A1W2PR82 267 aa16.86■□□□□ 0.29
BBS1-201ENST00000318312 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
BBS1-201ENST00000318312 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
BBS1-201ENST00000318312 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
BBS1-201ENST00000318312 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
BBS1-201ENST00000318312 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
BBS1-201ENST00000318312 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
BBS1-201ENST00000318312 WIZO95785 1651 aa16.44■□□□□ 0.22
BBS1-201ENST00000318312 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
BBS1-201ENST00000318312 HRCP23327 699 aa16.33■□□□□ 0.2
BBS1-201ENST00000318312 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
BBS1-201ENST00000318312 UBTFP17480 764 aaKnown RBP16.28■□□□□ 0.2
BBS1-201ENST00000318312 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
BBS1-201ENST00000318312 SMARCA4P51532 1647 aa16.24■□□□□ 0.19
BBS1-201ENST00000318312 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
BBS1-201ENST00000318312 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
BBS1-201ENST00000318312 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
BBS1-201ENST00000318312 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
BBS1-201ENST00000318312 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
BBS1-201ENST00000318312 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
BBS1-201ENST00000318312 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
BBS1-201ENST00000318312 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
BBS1-201ENST00000318312 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.17
BBS1-201ENST00000318312 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
BBS1-201ENST00000318312 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
BBS1-201ENST00000318312 APLP2Q06481 763 aa16■□□□□ 0.15
BBS1-201ENST00000318312 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
BBS1-201ENST00000318312 SOGA1O94964 1423 aa15.98■□□□□ 0.15
BBS1-201ENST00000318312 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
BBS1-201ENST00000318312 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
BBS1-201ENST00000318312 EEA1Q15075 1411 aa15.88■□□□□ 0.13
BBS1-201ENST00000318312 CEP162Q5TB80 1403 aa15.84■□□□□ 0.13
BBS1-201ENST00000318312 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
BBS1-201ENST00000318312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.13
BBS1-201ENST00000318312 TNIKQ9UKE5 1360 aa15.81■□□□□ 0.12
BBS1-201ENST00000318312 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
BBS1-201ENST00000318312 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
BBS1-201ENST00000318312 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
BBS1-201ENST00000318312 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
BBS1-201ENST00000318312 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
BBS1-201ENST00000318312 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
BBS1-201ENST00000318312 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
BBS1-201ENST00000318312 CLIP1P30622 1438 aa15.68■□□□□ 0.1
BBS1-201ENST00000318312 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
BBS1-201ENST00000318312 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
BBS1-201ENST00000318312 KIF27Q86VH2 1401 aa15.59■□□□□ 0.09
BBS1-201ENST00000318312 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
BBS1-201ENST00000318312 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
BBS1-201ENST00000318312 PELP1Q8IZL8 1130 aaKnown RBP15.56■□□□□ 0.08
BBS1-201ENST00000318312 CADPSQ9ULU8 1353 aa15.55■□□□□ 0.08
BBS1-201ENST00000318312 ITGAEP38570 1179 aa15.52■□□□□ 0.07
BBS1-201ENST00000318312 CFTRP13569 1480 aa15.51■□□□□ 0.07
BBS1-201ENST00000318312 P3H3Q8IVL6 736 aa15.5■□□□□ 0.07
BBS1-201ENST00000318312 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
BBS1-201ENST00000318312 CUX2O14529 1486 aa15.48■□□□□ 0.07
BBS1-201ENST00000318312 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
BBS1-201ENST00000318312 CUX1P39880 1505 aa15.44■□□□□ 0.06
BBS1-201ENST00000318312 KIF21BO75037 1637 aa15.43■□□□□ 0.06
BBS1-201ENST00000318312 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
BBS1-201ENST00000318312 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
BBS1-201ENST00000318312 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
BBS1-201ENST00000318312 PRXQ9BXM0 1461 aa15.34■□□□□ 0.05
BBS1-201ENST00000318312 IGF1RP08069 1367 aa15.34■□□□□ 0.05
BBS1-201ENST00000318312 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.05
BBS1-201ENST00000318312 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.04
BBS1-201ENST00000318312 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
BBS1-201ENST00000318312 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
BBS1-201ENST00000318312 NESP48681 1621 aa15.3■□□□□ 0.04
BBS1-201ENST00000318312 MYT1Q01538 1121 aa15.29■□□□□ 0.04
BBS1-201ENST00000318312 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
BBS1-201ENST00000318312 RAD54L2Q9Y4B4 1467 aa15.26■□□□□ 0.03
BBS1-201ENST00000318312 TDRD9Q8NDG6 1382 aaKnown RBP15.25■□□□□ 0.03
BBS1-201ENST00000318312 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
BBS1-201ENST00000318312 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
BBS1-201ENST00000318312 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
BBS1-201ENST00000318312 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
BBS1-201ENST00000318312 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
BBS1-201ENST00000318312 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
BBS1-201ENST00000318312 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
BBS1-201ENST00000318312 ARID3CA6NKF2 412 aa15.15■□□□□ 0.02
BBS1-201ENST00000318312 CENPBP07199 599 aaPredicted RBP15.15■□□□□ 0.02
BBS1-201ENST00000318312 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
BBS1-201ENST00000318312 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
BBS1-201ENST00000318312 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms