RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
EDEM3-201ENST00000318130 EHMT2Q96KQ7 1210 aa23.37■■□□□ 1.33
EDEM3-201ENST00000318130 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
EDEM3-201ENST00000318130 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
EDEM3-201ENST00000318130 TTBK1Q5TCY1 1321 aaPredicted RBP22.35■■□□□ 1.17
EDEM3-201ENST00000318130 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
EDEM3-201ENST00000318130 NISCHQ9Y2I1 1504 aa22.08■■□□□ 1.13
EDEM3-201ENST00000318130 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
EDEM3-201ENST00000318130 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
EDEM3-201ENST00000318130 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
EDEM3-201ENST00000318130 APLP2Q06481 763 aa21.76■■□□□ 1.07
EDEM3-201ENST00000318130 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
EDEM3-201ENST00000318130 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
EDEM3-201ENST00000318130 MYT1LQ9UL68 1186 aa21.38■■□□□ 1.01
EDEM3-201ENST00000318130 CENPBP07199 599 aaPredicted RBP21.28■■□□□ 1
EDEM3-201ENST00000318130 ERICH6Q7L0X2 663 aa21.25■□□□□ 0.99
EDEM3-201ENST00000318130 PPARGC1BQ86YN6 1023 aaKnown RBP21.15■□□□□ 0.98
EDEM3-201ENST00000318130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
EDEM3-201ENST00000318130 UBTFP17480 764 aaKnown RBP21.09■□□□□ 0.97
EDEM3-201ENST00000318130 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
EDEM3-201ENST00000318130 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
EDEM3-201ENST00000318130 MYT1Q01538 1121 aa21.05■□□□□ 0.96
EDEM3-201ENST00000318130 CCER1Q8TC90 406 aaPredicted RBP21.02■□□□□ 0.95
EDEM3-201ENST00000318130 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
EDEM3-201ENST00000318130 CNGB1Q14028 1251 aaPredicted RBP20.91■□□□□ 0.94
EDEM3-201ENST00000318130 YTHDC1Q96MU7 727 aaKnown RBP20.85■□□□□ 0.93
EDEM3-201ENST00000318130 POLR3GLQ9BT43 218 aa20.85■□□□□ 0.93
EDEM3-201ENST00000318130 ITGAEP38570 1179 aa20.84■□□□□ 0.93
EDEM3-201ENST00000318130 NEFLP07196 543 aa20.71■□□□□ 0.91
EDEM3-201ENST00000318130 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
EDEM3-201ENST00000318130 SLC4A1APQ9BWU0 796 aaKnown RBP20.7■□□□□ 0.9
EDEM3-201ENST00000318130 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
EDEM3-201ENST00000318130 FBLN2P98095 1184 aa20.51■□□□□ 0.87
EDEM3-201ENST00000318130 ABCC9O60706 1549 aa20.49■□□□□ 0.87
EDEM3-201ENST00000318130 HRCP23327 699 aa20.48■□□□□ 0.87
EDEM3-201ENST00000318130 TRIM26Q12899 539 aaPredicted RBP20.35■□□□□ 0.85
EDEM3-201ENST00000318130 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
EDEM3-201ENST00000318130 BCANQ96GW7 911 aa20.21■□□□□ 0.83
EDEM3-201ENST00000318130 SLC24A1O60721 1099 aa20.15■□□□□ 0.82
EDEM3-201ENST00000318130 DAXXQ9UER7 740 aaPredicted RBP20.13■□□□□ 0.81
EDEM3-201ENST00000318130 BCL11AQ9H165 835 aa20.09■□□□□ 0.81
EDEM3-201ENST00000318130 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.81
EDEM3-201ENST00000318130 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
EDEM3-201ENST00000318130 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
EDEM3-201ENST00000318130 ZNF326Q5BKZ1 582 aaKnown RBP19.96■□□□□ 0.79
EDEM3-201ENST00000318130 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
EDEM3-201ENST00000318130 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
EDEM3-201ENST00000318130 DIEXFQ68CQ4 756 aaKnown RBP19.88■□□□□ 0.77
EDEM3-201ENST00000318130 RTL5Q5HYW3 569 aaPredicted RBP19.87■□□□□ 0.77
EDEM3-201ENST00000318130 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
EDEM3-201ENST00000318130 PLEKHG5O94827 1062 aa19.81■□□□□ 0.76
EDEM3-201ENST00000318130 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
EDEM3-201ENST00000318130 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
EDEM3-201ENST00000318130 ZNF316A6NFI3 1004 aaPredicted RBP19.7■□□□□ 0.74
EDEM3-201ENST00000318130 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
EDEM3-201ENST00000318130 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
EDEM3-201ENST00000318130 CHGAP10645 457 aaKnown RBP19.62■□□□□ 0.73
EDEM3-201ENST00000318130 A0A0G2JS52 829 aa19.61■□□□□ 0.73
EDEM3-201ENST00000318130 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
EDEM3-201ENST00000318130 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
EDEM3-201ENST00000318130 ZBTB7CA1YPR0 619 aa19.46■□□□□ 0.71
EDEM3-201ENST00000318130 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
EDEM3-201ENST00000318130 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
EDEM3-201ENST00000318130 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
EDEM3-201ENST00000318130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
EDEM3-201ENST00000318130 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
EDEM3-201ENST00000318130 ANP32CO43423 234 aa19.29■□□□□ 0.68
EDEM3-201ENST00000318130 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
EDEM3-201ENST00000318130 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
EDEM3-201ENST00000318130 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
EDEM3-201ENST00000318130 C14orf37Q86TY3 774 aa19.2■□□□□ 0.66
EDEM3-201ENST00000318130 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
EDEM3-201ENST00000318130 KCNH8Q96L42 1107 aa19.18■□□□□ 0.66
EDEM3-201ENST00000318130 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.65
EDEM3-201ENST00000318130 NEFMP07197 916 aa19.13■□□□□ 0.65
EDEM3-201ENST00000318130 ANP32AP39687 249 aaKnown RBP19.12■□□□□ 0.65
EDEM3-201ENST00000318130 EIF5BO60841 1220 aaKnown RBP19.11■□□□□ 0.65
EDEM3-201ENST00000318130 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
EDEM3-201ENST00000318130 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
EDEM3-201ENST00000318130 NPM2Q86SE8 214 aaKnown RBP19.06■□□□□ 0.64
EDEM3-201ENST00000318130 KDM2AQ9Y2K7 1162 aa19.01■□□□□ 0.63
EDEM3-201ENST00000318130 FKBP8Q14318 412 aa19.01■□□□□ 0.63
EDEM3-201ENST00000318130 HAP1P54257 671 aaPredicted RBP19■□□□□ 0.63
EDEM3-201ENST00000318130 ARXQ96QS3 562 aa18.96■□□□□ 0.63
EDEM3-201ENST00000318130 PPP1R15AO75807 674 aaPredicted RBP18.89■□□□□ 0.61
EDEM3-201ENST00000318130 SENP3-EIF4A1A0A087X0R7 540 aa18.88■□□□□ 0.61
EDEM3-201ENST00000318130 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
EDEM3-201ENST00000318130 MLECQ14165 292 aa18.86■□□□□ 0.61
EDEM3-201ENST00000318130 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
EDEM3-201ENST00000318130 NBR1Q14596 966 aa18.82■□□□□ 0.6
EDEM3-201ENST00000318130 TULP1O00294 542 aaPredicted RBP18.78■□□□□ 0.6
EDEM3-201ENST00000318130 GLIPR1L2Q4G1C9 344 aa18.78■□□□□ 0.6
EDEM3-201ENST00000318130 HNRNPUQ00839 825 aaKnown RBP eCLIP18.77■□□□□ 0.6
EDEM3-201ENST00000318130 ANP32BQ92688 251 aaKnown RBP18.76■□□□□ 0.59
EDEM3-201ENST00000318130 HIRIP3Q9BW71 556 aaPredicted RBP18.75■□□□□ 0.59
EDEM3-201ENST00000318130 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
EDEM3-201ENST00000318130 FAM9BQ8IZU0 186 aa18.71■□□□□ 0.59
EDEM3-201ENST00000318130 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
EDEM3-201ENST00000318130 PPM1GO15355 546 aaPredicted RBP18.7■□□□□ 0.58
EDEM3-201ENST00000318130 RGL3Q3MIN7 710 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms