RNA–Protein interactions for RNA: ENST00000316629.8

CDK1-201, Transcript of cyclin dependent kinase 1, humanhuman

TSL 5 BASIC

Gene CDK1, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK1-201ENST00000316629 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
CDK1-201ENST00000316629 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
CDK1-201ENST00000316629 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
CDK1-201ENST00000316629 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
CDK1-201ENST00000316629 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
CDK1-201ENST00000316629 FOXD1Q16676 465 aa15.3■□□□□ 0.04
CDK1-201ENST00000316629 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
CDK1-201ENST00000316629 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
CDK1-201ENST00000316629 ADRA2BP18089 450 aa14.4□□□□□ -0.1
CDK1-201ENST00000316629 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
CDK1-201ENST00000316629 MSH5O43196 834 aa14.25□□□□□ -0.13
CDK1-201ENST00000316629 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
CDK1-201ENST00000316629 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
CDK1-201ENST00000316629 DMRT2Q9Y5R5 561 aa13.04□□□□□ -0.32
CDK1-201ENST00000316629 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
CDK1-201ENST00000316629 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
CDK1-201ENST00000316629 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
CDK1-201ENST00000316629 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
CDK1-201ENST00000316629 RNF216Q9NWF9 866 aaPredicted RBP12.57□□□□□ -0.4
CDK1-201ENST00000316629 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
CDK1-201ENST00000316629 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
CDK1-201ENST00000316629 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
CDK1-201ENST00000316629 KCNA4P22459 653 aa12.27□□□□□ -0.45
CDK1-201ENST00000316629 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
CDK1-201ENST00000316629 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
CDK1-201ENST00000316629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.482e-8■■■■□ 21.6
CDK1-201ENST00000316629 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
CDK1-201ENST00000316629 POTEHQ6S545 545 aa11.89□□□□□ -0.51
CDK1-201ENST00000316629 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
CDK1-201ENST00000316629 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
CDK1-201ENST00000316629 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
CDK1-201ENST00000316629 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
CDK1-201ENST00000316629 CAPN15O75808 1086 aa11.6□□□□□ -0.55
CDK1-201ENST00000316629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.51□□□□□ -0.57
CDK1-201ENST00000316629 HNRNPUL2Q1KMD3 747 aaKnown RBP11.51□□□□□ -0.57
CDK1-201ENST00000316629 APLP2Q06481 763 aa11.49□□□□□ -0.57
CDK1-201ENST00000316629 TRHP20396 242 aaPredicted RBP11.46□□□□□ -0.58
CDK1-201ENST00000316629 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.58
CDK1-201ENST00000316629 DSG3P32926 999 aa11.45□□□□□ -0.58
CDK1-201ENST00000316629 MYCNP04198 464 aaPredicted RBP11.43□□□□□ -0.58
CDK1-201ENST00000316629 FOXD4L1Q9NU39 408 aa11.4□□□□□ -0.58
CDK1-201ENST00000316629 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
CDK1-201ENST00000316629 ABCB7O75027 752 aa11.35□□□□□ -0.59
CDK1-201ENST00000316629 ZBTB22O15209 634 aa11.28□□□□□ -0.6
CDK1-201ENST00000316629 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
CDK1-201ENST00000316629 POLA2Q14181 598 aa11.16□□□□□ -0.62
CDK1-201ENST00000316629 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
CDK1-201ENST00000316629 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
CDK1-201ENST00000316629 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
CDK1-201ENST00000316629 CSRNP3Q8WYN3 585 aa10.89□□□□□ -0.67
CDK1-201ENST00000316629 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
CDK1-201ENST00000316629 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
CDK1-201ENST00000316629 FBLN2P98095 1184 aa10.74□□□□□ -0.69
CDK1-201ENST00000316629 AKT1S1Q96B36 256 aa10.7□□□□□ -0.7
CDK1-201ENST00000316629 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
CDK1-201ENST00000316629 CHRDL2Q6WN34 429 aa10.64□□□□□ -0.71
CDK1-201ENST00000316629 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
CDK1-201ENST00000316629 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
CDK1-201ENST00000316629 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
CDK1-201ENST00000316629 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
CDK1-201ENST00000316629 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
CDK1-201ENST00000316629 PITPNM1O00562 1244 aa10.5□□□□□ -0.73
CDK1-201ENST00000316629 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
CDK1-201ENST00000316629 SSUH2Q9Y2M2 353 aa10.45□□□□□ -0.74
CDK1-201ENST00000316629 PIP4P2Q8N4L2 257 aa10.42□□□□□ -0.74
CDK1-201ENST00000316629 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
CDK1-201ENST00000316629 CLEC11AQ9Y240 323 aa10.4□□□□□ -0.74
CDK1-201ENST00000316629 SPDYE1Q8NFV5 336 aaPredicted RBP10.38□□□□□ -0.75
CDK1-201ENST00000316629 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDK1-201ENST00000316629 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
CDK1-201ENST00000316629 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
CDK1-201ENST00000316629 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
CDK1-201ENST00000316629 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
CDK1-201ENST00000316629 HAX1O00165 279 aa10.22□□□□□ -0.77
CDK1-201ENST00000316629 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
CDK1-201ENST00000316629 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
CDK1-201ENST00000316629 EVX2Q03828 476 aa10.08□□□□□ -0.8
CDK1-201ENST00000316629 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
CDK1-201ENST00000316629 FARP1Q9Y4F1 1045 aaPredicted RBP10.02□□□□□ -0.81
CDK1-201ENST00000316629 CREBZFQ9NS37 354 aa9.99□□□□□ -0.81
CDK1-201ENST00000316629 PROM2Q8N271 834 aa9.96□□□□□ -0.81
CDK1-201ENST00000316629 CD44P16070 742 aaKnown RBP9.93□□□□□ -0.82
CDK1-201ENST00000316629 FKBP8Q14318 412 aa9.9□□□□□ -0.83
CDK1-201ENST00000316629 GABBR2O75899 941 aa9.86□□□□□ -0.83
CDK1-201ENST00000316629 ZRANB1Q9UGI0 708 aa9.82□□□□□ -0.84
CDK1-201ENST00000316629 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDK1-201ENST00000316629 LHX8Q68G74 356 aa9.82□□□□□ -0.84
CDK1-201ENST00000316629 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
CDK1-201ENST00000316629 MIER1Q8N108 512 aa9.79□□□□□ -0.84
CDK1-201ENST00000316629 PAK3O75914 559 aaPredicted RBP9.77□□□□□ -0.85
CDK1-201ENST00000316629 PLEKHG5O94827 1062 aa9.76□□□□□ -0.85
CDK1-201ENST00000316629 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
CDK1-201ENST00000316629 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
CDK1-201ENST00000316629 CLCN6P51797 869 aa9.71□□□□□ -0.85
CDK1-201ENST00000316629 PHF12Q96QT6 1004 aa9.7□□□□□ -0.86
CDK1-201ENST00000316629 TSPYL2Q9H2G4 693 aaPredicted RBP9.68□□□□□ -0.86
CDK1-201ENST00000316629 GALR2O43603 387 aaPredicted RBP9.65□□□□□ -0.86
CDK1-201ENST00000316629 DCBLD2Q96PD2 775 aa9.65□□□□□ -0.86
CDK1-201ENST00000316629 POTEIP0CG38 1075 aa9.65□□□□□ -0.87
CDK1-201ENST00000316629 FBXO3Q9UK99 471 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms