RNA–Protein interactions for RNA: ENST00000315987.6

KCND3-202, Transcript of potassium voltage-gated channel subfamily D member 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KCND3, Length 2,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCND3-202ENST00000315987 NISCHQ9Y2I1 1504 aa33.56■■■□□ 2.96
KCND3-202ENST00000315987 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
KCND3-202ENST00000315987 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
KCND3-202ENST00000315987 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
KCND3-202ENST00000315987 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
KCND3-202ENST00000315987 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
KCND3-202ENST00000315987 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
KCND3-202ENST00000315987 DCAF1Q9Y4B6 1507 aa27.32■■□□□ 1.96
KCND3-202ENST00000315987 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
KCND3-202ENST00000315987 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
KCND3-202ENST00000315987 ABCC9O60706 1549 aa26.88■■□□□ 1.89
KCND3-202ENST00000315987 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
KCND3-202ENST00000315987 RSF1Q96T23 1441 aaPredicted RBP26.6■■□□□ 1.85
KCND3-202ENST00000315987 PCGF6Q9BYE7 350 aa26.49■■□□□ 1.83
KCND3-202ENST00000315987 NACADO15069 1562 aa26.45■■□□□ 1.82
KCND3-202ENST00000315987 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
KCND3-202ENST00000315987 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
KCND3-202ENST00000315987 HRCP23327 699 aa26.27■■□□□ 1.8
KCND3-202ENST00000315987 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
KCND3-202ENST00000315987 FAM9AQ8IZU1 332 aaPredicted RBP26.2■■□□□ 1.79
KCND3-202ENST00000315987 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
KCND3-202ENST00000315987 EHMT2Q96KQ7 1210 aa26.16■■□□□ 1.78
KCND3-202ENST00000315987 WIZO95785 1651 aa26.11■■□□□ 1.77
KCND3-202ENST00000315987 PPARGC1BQ86YN6 1023 aaKnown RBP26.06■■□□□ 1.76
KCND3-202ENST00000315987 TRIM26Q12899 539 aaPredicted RBP25.79■■□□□ 1.72
KCND3-202ENST00000315987 UNC13AQ9UPW8 1703 aa25.76■■□□□ 1.71
KCND3-202ENST00000315987 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
KCND3-202ENST00000315987 PABPN1Q86U42 306 aaKnown RBP eCLIP25.66■■□□□ 1.7
KCND3-202ENST00000315987 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
KCND3-202ENST00000315987 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
KCND3-202ENST00000315987 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
KCND3-202ENST00000315987 CCDC88BA6NC98 1476 aa25.52■■□□□ 1.68
KCND3-202ENST00000315987 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
KCND3-202ENST00000315987 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
KCND3-202ENST00000315987 SMARCA2P51531 1590 aa25.45■■□□□ 1.67
KCND3-202ENST00000315987 SOGA1O94964 1423 aa25.27■■□□□ 1.64
KCND3-202ENST00000315987 TTBK1Q5TCY1 1321 aaPredicted RBP25.25■■□□□ 1.63
KCND3-202ENST00000315987 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
KCND3-202ENST00000315987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.02■■□□□ 1.6
KCND3-202ENST00000315987 CEP162Q5TB80 1403 aa25.01■■□□□ 1.59
KCND3-202ENST00000315987 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
KCND3-202ENST00000315987 CSRNP3Q8WYN3 585 aa24.99■■□□□ 1.59
KCND3-202ENST00000315987 UBTFP17480 764 aaKnown RBP24.99■■□□□ 1.59
KCND3-202ENST00000315987 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
KCND3-202ENST00000315987 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
KCND3-202ENST00000315987 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
KCND3-202ENST00000315987 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
KCND3-202ENST00000315987 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.58
KCND3-202ENST00000315987 TNIKQ9UKE5 1360 aa24.87■■□□□ 1.57
KCND3-202ENST00000315987 CCER1Q8TC90 406 aaPredicted RBP24.81■■□□□ 1.56
KCND3-202ENST00000315987 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
KCND3-202ENST00000315987 EEA1Q15075 1411 aa24.77■■□□□ 1.56
KCND3-202ENST00000315987 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
KCND3-202ENST00000315987 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
KCND3-202ENST00000315987 CEP164Q9UPV0 1460 aa24.6■■□□□ 1.53
KCND3-202ENST00000315987 KIF21BO75037 1637 aa24.56■■□□□ 1.52
KCND3-202ENST00000315987 CLIP1P30622 1438 aa24.54■■□□□ 1.52
KCND3-202ENST00000315987 TOP2BQ02880 1626 aa24.49■■□□□ 1.51
KCND3-202ENST00000315987 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
KCND3-202ENST00000315987 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
KCND3-202ENST00000315987 HMGXB3Q12766 1538 aa24.39■■□□□ 1.5
KCND3-202ENST00000315987 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
KCND3-202ENST00000315987 CUX1P39880 1505 aa24.38■■□□□ 1.49
KCND3-202ENST00000315987 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
KCND3-202ENST00000315987 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
KCND3-202ENST00000315987 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
KCND3-202ENST00000315987 APLP2Q06481 763 aa24.27■■□□□ 1.48
KCND3-202ENST00000315987 DIEXFQ68CQ4 756 aaKnown RBP24.25■■□□□ 1.47
KCND3-202ENST00000315987 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
KCND3-202ENST00000315987 CFTRP13569 1480 aa24.23■■□□□ 1.47
KCND3-202ENST00000315987 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
KCND3-202ENST00000315987 KANK4Q5T7N3 995 aaPredicted RBP24.19■■□□□ 1.46
KCND3-202ENST00000315987 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
KCND3-202ENST00000315987 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
KCND3-202ENST00000315987 NEUROD1Q13562 356 aa24.07■■□□□ 1.44
KCND3-202ENST00000315987 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
KCND3-202ENST00000315987 CUX2O14529 1486 aa24.04■■□□□ 1.44
KCND3-202ENST00000315987 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
KCND3-202ENST00000315987 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
KCND3-202ENST00000315987 PRDM2Q13029 1718 aa23.97■■□□□ 1.43
KCND3-202ENST00000315987 IGF1RP08069 1367 aa23.97■■□□□ 1.43
KCND3-202ENST00000315987 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
KCND3-202ENST00000315987 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
KCND3-202ENST00000315987 ITGAEP38570 1179 aa23.93■■□□□ 1.42
KCND3-202ENST00000315987 P3H3Q8IVL6 736 aa23.88■■□□□ 1.41
KCND3-202ENST00000315987 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
KCND3-202ENST00000315987 NESP48681 1621 aa23.86■■□□□ 1.41
KCND3-202ENST00000315987 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
KCND3-202ENST00000315987 MIER1Q8N108 512 aa23.84■■□□□ 1.41
KCND3-202ENST00000315987 DHX57Q6P158 1386 aaKnown RBP23.84■■□□□ 1.41
KCND3-202ENST00000315987 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
KCND3-202ENST00000315987 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
KCND3-202ENST00000315987 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
KCND3-202ENST00000315987 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.4
KCND3-202ENST00000315987 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.4
KCND3-202ENST00000315987 ATP1B4Q9UN42 357 aaPredicted RBP23.75■■□□□ 1.39
KCND3-202ENST00000315987 CCNB3Q8WWL7 1395 aa23.73■■□□□ 1.39
KCND3-202ENST00000315987 CENPBP07199 599 aaPredicted RBP23.7■■□□□ 1.38
KCND3-202ENST00000315987 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
KCND3-202ENST00000315987 TIAM1Q13009 1591 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms