RNA–Protein interactions for RNA: ENST00000315758.9

MDH2-201, Transcript of malate dehydrogenase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH2, Length 2,209 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH2-201ENST00000315758 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
MDH2-201ENST00000315758 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
MDH2-201ENST00000315758 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
MDH2-201ENST00000315758 SHROOM4Q9ULL8 1493 aa21.03■□□□□ 0.96
MDH2-201ENST00000315758 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
MDH2-201ENST00000315758 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
MDH2-201ENST00000315758 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
MDH2-201ENST00000315758 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
MDH2-201ENST00000315758 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
MDH2-201ENST00000315758 ABCC9O60706 1549 aa19.96■□□□□ 0.79
MDH2-201ENST00000315758 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
MDH2-201ENST00000315758 NACADO15069 1562 aa19.81■□□□□ 0.76
MDH2-201ENST00000315758 RSF1Q96T23 1441 aaPredicted RBP19.75■□□□□ 0.75
MDH2-201ENST00000315758 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
MDH2-201ENST00000315758 CECR2Q9BXF3 1484 aa19.44■□□□□ 0.7
MDH2-201ENST00000315758 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
MDH2-201ENST00000315758 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
MDH2-201ENST00000315758 HRCP23327 699 aa19.37■□□□□ 0.69
MDH2-201ENST00000315758 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
MDH2-201ENST00000315758 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
MDH2-201ENST00000315758 WIZO95785 1651 aa19.28■□□□□ 0.68
MDH2-201ENST00000315758 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
MDH2-201ENST00000315758 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
MDH2-201ENST00000315758 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
MDH2-201ENST00000315758 SMARCA4P51532 1647 aa19.09■□□□□ 0.65
MDH2-201ENST00000315758 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.65
MDH2-201ENST00000315758 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
MDH2-201ENST00000315758 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
MDH2-201ENST00000315758 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
MDH2-201ENST00000315758 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
MDH2-201ENST00000315758 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
MDH2-201ENST00000315758 PPARGC1BQ86YN6 1023 aaKnown RBP18.82■□□□□ 0.6
MDH2-201ENST00000315758 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
MDH2-201ENST00000315758 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
MDH2-201ENST00000315758 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
MDH2-201ENST00000315758 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
MDH2-201ENST00000315758 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
MDH2-201ENST00000315758 EEA1Q15075 1411 aa18.66■□□□□ 0.58
MDH2-201ENST00000315758 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
MDH2-201ENST00000315758 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
MDH2-201ENST00000315758 SOGA1O94964 1423 aa18.6■□□□□ 0.57
MDH2-201ENST00000315758 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.56
MDH2-201ENST00000315758 TNIKQ9UKE5 1360 aa18.56■□□□□ 0.56
MDH2-201ENST00000315758 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
MDH2-201ENST00000315758 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
MDH2-201ENST00000315758 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
MDH2-201ENST00000315758 RUSC2Q8N2Y8 1516 aa18.49■□□□□ 0.55
MDH2-201ENST00000315758 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
MDH2-201ENST00000315758 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
MDH2-201ENST00000315758 KIF21BO75037 1637 aa18.38■□□□□ 0.53
MDH2-201ENST00000315758 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
MDH2-201ENST00000315758 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
MDH2-201ENST00000315758 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
MDH2-201ENST00000315758 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
MDH2-201ENST00000315758 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
MDH2-201ENST00000315758 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
MDH2-201ENST00000315758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
MDH2-201ENST00000315758 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
MDH2-201ENST00000315758 CLIP1P30622 1438 aa18.2■□□□□ 0.5
MDH2-201ENST00000315758 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
MDH2-201ENST00000315758 MYT1Q01538 1121 aa18.15■□□□□ 0.5
MDH2-201ENST00000315758 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
MDH2-201ENST00000315758 TTBK1Q5TCY1 1321 aaPredicted RBP18.13■□□□□ 0.49
MDH2-201ENST00000315758 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
MDH2-201ENST00000315758 CFTRP13569 1480 aa18.11■□□□□ 0.49
MDH2-201ENST00000315758 PRXQ9BXM0 1461 aa18.09■□□□□ 0.49
MDH2-201ENST00000315758 CUX1P39880 1505 aa18.09■□□□□ 0.49
MDH2-201ENST00000315758 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
MDH2-201ENST00000315758 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
MDH2-201ENST00000315758 APLP2Q06481 763 aa17.99■□□□□ 0.47
MDH2-201ENST00000315758 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
MDH2-201ENST00000315758 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
MDH2-201ENST00000315758 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
MDH2-201ENST00000315758 RANGAP1P46060 587 aaPredicted RBP17.86■□□□□ 0.45
MDH2-201ENST00000315758 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
MDH2-201ENST00000315758 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
MDH2-201ENST00000315758 CUX2O14529 1486 aa17.8■□□□□ 0.44
MDH2-201ENST00000315758 IGF1RP08069 1367 aa17.8■□□□□ 0.44
MDH2-201ENST00000315758 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
MDH2-201ENST00000315758 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
MDH2-201ENST00000315758 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
MDH2-201ENST00000315758 KANK4Q5T7N3 995 aaPredicted RBP17.74■□□□□ 0.43
MDH2-201ENST00000315758 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
MDH2-201ENST00000315758 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
MDH2-201ENST00000315758 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
MDH2-201ENST00000315758 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
MDH2-201ENST00000315758 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
MDH2-201ENST00000315758 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
MDH2-201ENST00000315758 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
MDH2-201ENST00000315758 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
MDH2-201ENST00000315758 DHX57Q6P158 1386 aaKnown RBP17.63■□□□□ 0.41
MDH2-201ENST00000315758 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
MDH2-201ENST00000315758 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
MDH2-201ENST00000315758 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
MDH2-201ENST00000315758 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
MDH2-201ENST00000315758 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
MDH2-201ENST00000315758 NEUROD1Q13562 356 aa17.57■□□□□ 0.4
MDH2-201ENST00000315758 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
MDH2-201ENST00000315758 FHAD1B1AJZ9 1412 aa17.57■□□□□ 0.4
MDH2-201ENST00000315758 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms