RNA–Protein interactions for RNA: ENST00000315596.14

PDS5B-201, Transcript of PDS5 cohesin associated factor B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5B, Length 7,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-201ENST00000315596 NISCHQ9Y2I1 1504 aa11.71□□□□□ -0.53
PDS5B-201ENST00000315596 CCDC180Q9P1Z9 1646 aa10.09□□□□□ -0.79
PDS5B-201ENST00000315596 ZCCHC6Q5VYS8 1495 aaKnown RBP9.97□□□□□ -0.81
PDS5B-201ENST00000315596 DCAF1Q9Y4B6 1507 aa9.69□□□□□ -0.86
PDS5B-201ENST00000315596 MYO15BQ96JP2 1530 aa9.59□□□□□ -0.87
PDS5B-201ENST00000315596 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
PDS5B-201ENST00000315596 UNC13AQ9UPW8 1703 aa9.48□□□□□ -0.89
PDS5B-201ENST00000315596 ABCC9O60706 1549 aa9.44□□□□□ -0.9
PDS5B-201ENST00000315596 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
PDS5B-201ENST00000315596 HRCP23327 699 aa9.3□□□□□ -0.92
PDS5B-201ENST00000315596 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
PDS5B-201ENST00000315596 SCRIBQ14160 1630 aa9.27□□□□□ -0.93
PDS5B-201ENST00000315596 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
PDS5B-201ENST00000315596 CHIC1Q5VXU3 224 aa9.21□□□□□ -0.93
PDS5B-201ENST00000315596 CECR2Q9BXF3 1484 aa9.2□□□□□ -0.94
PDS5B-201ENST00000315596 WIZO95785 1651 aa9.19□□□□□ -0.94
PDS5B-201ENST00000315596 MROH2BQ7Z745 1585 aa9.17□□□□□ -0.94
PDS5B-201ENST00000315596 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.94
PDS5B-201ENST00000315596 NACADO15069 1562 aa9.15□□□□□ -0.94
PDS5B-201ENST00000315596 SUPT5HO00267 1087 aaKnown RBP9.14□□□□□ -0.95
PDS5B-201ENST00000315596 BICRAQ9NZM4 1560 aa9.14□□□□□ -0.95
PDS5B-201ENST00000315596 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
PDS5B-201ENST00000315596 BAZ1AQ9NRL2 1556 aaPredicted RBP9.05□□□□□ -0.96
PDS5B-201ENST00000315596 PCGF6Q9BYE7 350 aa9.01□□□□□ -0.97
PDS5B-201ENST00000315596 SMARCA4P51532 1647 aa8.98□□□□□ -0.97
PDS5B-201ENST00000315596 PEG3Q9GZU2 1588 aa8.97□□□□□ -0.97
PDS5B-201ENST00000315596 SMARCA2P51531 1590 aa8.95□□□□□ -0.98
PDS5B-201ENST00000315596 SCAF1Q9H7N4 1312 aaKnown RBP8.93□□□□□ -0.98
PDS5B-201ENST00000315596 LOC105371045A0A1W2PR82 267 aa8.91□□□□□ -0.98
PDS5B-201ENST00000315596 TOP2AP11388 1531 aaKnown RBP8.87□□□□□ -0.99
PDS5B-201ENST00000315596 DCAF8L2P0C7V8 631 aa8.86□□□□□ -0.99
PDS5B-201ENST00000315596 ABCC8Q09428 1581 aa8.86□□□□□ -0.99
PDS5B-201ENST00000315596 CCDC88BA6NC98 1476 aa8.82□□□□□ -1
PDS5B-201ENST00000315596 RUSC2Q8N2Y8 1516 aa8.78□□□□□ -1
PDS5B-201ENST00000315596 SYNJ1O43426 1573 aa8.77□□□□□ -1.01
PDS5B-201ENST00000315596 MYT1Q01538 1121 aa8.7□□□□□ -1.02
PDS5B-201ENST00000315596 PRDM2Q13029 1718 aa8.69□□□□□ -1.02
PDS5B-201ENST00000315596 SOGA1O94964 1423 aa8.67□□□□□ -1.02
PDS5B-201ENST00000315596 BIVM-ERCC5R4GMW8 1640 aa8.66□□□□□ -1.02
PDS5B-201ENST00000315596 NEUROD1Q13562 356 aa8.64□□□□□ -1.03
PDS5B-201ENST00000315596 ATAD2BQ9ULI0 1458 aa8.64□□□□□ -1.03
PDS5B-201ENST00000315596 ACIN1Q9UKV3 1341 aaKnown RBP8.6□□□□□ -1.03
PDS5B-201ENST00000315596 TRIM26Q12899 539 aaPredicted RBP8.59□□□□□ -1.03
PDS5B-201ENST00000315596 TOP2BQ02880 1626 aa8.59□□□□□ -1.03
PDS5B-201ENST00000315596 WRNQ14191 1432 aaPredicted RBP eCLIP8.58□□□□□ -1.04
PDS5B-201ENST00000315596 KIF21BO75037 1637 aa8.57□□□□□ -1.04
PDS5B-201ENST00000315596 LRRIQ1Q96JM4 1722 aa8.55□□□□□ -1.04
PDS5B-201ENST00000315596 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
PDS5B-201ENST00000315596 HMGXB3Q12766 1538 aa8.53□□□□□ -1.04
PDS5B-201ENST00000315596 CUX1P39880 1505 aa8.52□□□□□ -1.04
PDS5B-201ENST00000315596 ZEB1P37275 1124 aaPredicted RBP8.49□□□□□ -1.05
PDS5B-201ENST00000315596 PABPN1Q86U42 306 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDS5B-201ENST00000315596 WDR97A6NE52 1622 aa8.47□□□□□ -1.05
PDS5B-201ENST00000315596 NCAPD3P42695 1498 aa8.47□□□□□ -1.05
PDS5B-201ENST00000315596 TRIM41Q8WV44 630 aa8.47□□□□□ -1.05
PDS5B-201ENST00000315596 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.05
PDS5B-201ENST00000315596 CEP162Q5TB80 1403 aa8.45□□□□□ -1.06
PDS5B-201ENST00000315596 PRXQ9BXM0 1461 aa8.45□□□□□ -1.06
PDS5B-201ENST00000315596 CFTRP13569 1480 aa8.42□□□□□ -1.06
PDS5B-201ENST00000315596 BAZ1BQ9UIG0 1483 aaKnown RBP8.41□□□□□ -1.06
PDS5B-201ENST00000315596 TNIKQ9UKE5 1360 aa8.41□□□□□ -1.06
PDS5B-201ENST00000315596 ARAP1Q96P48 1450 aa8.4□□□□□ -1.06
PDS5B-201ENST00000315596 FAM9AQ8IZU1 332 aaPredicted RBP8.39□□□□□ -1.07
PDS5B-201ENST00000315596 ERICH3Q5RHP9 1530 aa8.37□□□□□ -1.07
PDS5B-201ENST00000315596 CC2D2AQ9P2K1 1620 aa8.36□□□□□ -1.07
PDS5B-201ENST00000315596 CLIP1P30622 1438 aa8.35□□□□□ -1.07
PDS5B-201ENST00000315596 CENPBP07199 599 aaPredicted RBP8.33□□□□□ -1.08
PDS5B-201ENST00000315596 EEA1Q15075 1411 aa8.33□□□□□ -1.08
PDS5B-201ENST00000315596 BCL11AQ9H165 835 aa8.32□□□□□ -1.08
PDS5B-201ENST00000315596 DNAJC5BQ9UF47 199 aa8.32□□□□□ -1.08
PDS5B-201ENST00000315596 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
PDS5B-201ENST00000315596 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
PDS5B-201ENST00000315596 ARHGAP35Q9NRY4 1499 aa8.29□□□□□ -1.08
PDS5B-201ENST00000315596 KIF21AQ7Z4S6 1674 aa8.29□□□□□ -1.08
PDS5B-201ENST00000315596 CEP164Q9UPV0 1460 aa8.28□□□□□ -1.08
PDS5B-201ENST00000315596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.28□□□□□ -1.08
PDS5B-201ENST00000315596 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
PDS5B-201ENST00000315596 ABCA5Q8WWZ7 1642 aa8.27□□□□□ -1.09
PDS5B-201ENST00000315596 CUX2O14529 1486 aa8.26□□□□□ -1.09
PDS5B-201ENST00000315596 CSRNP3Q8WYN3 585 aa8.26□□□□□ -1.09
PDS5B-201ENST00000315596 VPS8Q8N3P4 1428 aa8.26□□□□□ -1.09
PDS5B-201ENST00000315596 TARBP1Q13395 1621 aaKnown RBP8.26□□□□□ -1.09
PDS5B-201ENST00000315596 EHMT2Q96KQ7 1210 aa8.26□□□□□ -1.09
PDS5B-201ENST00000315596 CTTNBP2Q8WZ74 1663 aa8.26□□□□□ -1.09
PDS5B-201ENST00000315596 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
PDS5B-201ENST00000315596 NESP48681 1621 aa8.25□□□□□ -1.09
PDS5B-201ENST00000315596 MAPKBP1O60336 1514 aa8.22□□□□□ -1.09
PDS5B-201ENST00000315596 KDM5BQ9UGL1 1544 aa8.22□□□□□ -1.09
PDS5B-201ENST00000315596 SAMD9Q5K651 1589 aa8.21□□□□□ -1.09
PDS5B-201ENST00000315596 IGF1RP08069 1367 aa8.21□□□□□ -1.1
PDS5B-201ENST00000315596 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
PDS5B-201ENST00000315596 DENND4BO75064 1496 aaPredicted RBP8.2□□□□□ -1.1
PDS5B-201ENST00000315596 FGD5Q6ZNL6 1462 aa8.2□□□□□ -1.1
PDS5B-201ENST00000315596 PCF11O94913 1555 aaKnown RBP8.19□□□□□ -1.1
PDS5B-201ENST00000315596 RRBP1Q9P2E9 1410 aaKnown RBP8.18□□□□□ -1.1
PDS5B-201ENST00000315596 MAGI3Q5TCQ9 1506 aa8.18□□□□□ -1.1
PDS5B-201ENST00000315596 PRKCSHP14314 528 aaPredicted RBP8.18□□□□□ -1.1
PDS5B-201ENST00000315596 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
PDS5B-201ENST00000315596 TIAM1Q13009 1591 aa8.18□□□□□ -1.1
PDS5B-201ENST00000315596 POLA1P09884 1462 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms