RNA–Protein interactions for RNA: ENST00000315563.10

RRP12-201, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 1 (best) BASIC

Gene RRP12, Length 4,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-201ENST00000315563 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
RRP12-201ENST00000315563 DCAF8L2P0C7V8 631 aa17.93■□□□□ 0.46
RRP12-201ENST00000315563 SUPT5HO00267 1087 aaKnown RBP17.37■□□□□ 0.37
RRP12-201ENST00000315563 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
RRP12-201ENST00000315563 EHMT2Q96KQ7 1210 aa16.74■□□□□ 0.27
RRP12-201ENST00000315563 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
RRP12-201ENST00000315563 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.19
RRP12-201ENST00000315563 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
RRP12-201ENST00000315563 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
RRP12-201ENST00000315563 LOC105371045A0A1W2PR82 267 aa15.86■□□□□ 0.13
RRP12-201ENST00000315563 PPARGC1BQ86YN6 1023 aaKnown RBP15.85■□□□□ 0.13
RRP12-201ENST00000315563 RANGAP1P46060 587 aaPredicted RBP15.85■□□□□ 0.13
RRP12-201ENST00000315563 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
RRP12-201ENST00000315563 APLP2Q06481 763 aa15.6■□□□□ 0.09
RRP12-201ENST00000315563 UBTFP17480 764 aaKnown RBP15.56■□□□□ 0.08
RRP12-201ENST00000315563 CCER1Q8TC90 406 aaPredicted RBP15.55■□□□□ 0.08
RRP12-201ENST00000315563 HRCP23327 699 aa15.49■□□□□ 0.07
RRP12-201ENST00000315563 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
RRP12-201ENST00000315563 ATP1B4Q9UN42 357 aaPredicted RBP15.36■□□□□ 0.05
RRP12-201ENST00000315563 ABCC9O60706 1549 aa15.31■□□□□ 0.04
RRP12-201ENST00000315563 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
RRP12-201ENST00000315563 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.03
RRP12-201ENST00000315563 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
RRP12-201ENST00000315563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
RRP12-201ENST00000315563 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
RRP12-201ENST00000315563 ITGAEP38570 1179 aa15.16■□□□□ 0.02
RRP12-201ENST00000315563 CENPBP07199 599 aaPredicted RBP15.09■□□□□ 0.01
RRP12-201ENST00000315563 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
RRP12-201ENST00000315563 MYO15BQ96JP2 1530 aa14.93□□□□□ -0.02
RRP12-201ENST00000315563 PELP1Q8IZL8 1130 aaKnown RBP14.89□□□□□ -0.03
RRP12-201ENST00000315563 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
RRP12-201ENST00000315563 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.03
RRP12-201ENST00000315563 CNGB1Q14028 1251 aaPredicted RBP14.78□□□□□ -0.04
RRP12-201ENST00000315563 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
RRP12-201ENST00000315563 FAM50AQ14320 339 aaKnown RBP14.68□□□□□ -0.06
RRP12-201ENST00000315563 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
RRP12-201ENST00000315563 POLR3GLQ9BT43 218 aa14.66□□□□□ -0.06
RRP12-201ENST00000315563 NEUROD1Q13562 356 aa14.63□□□□□ -0.07
RRP12-201ENST00000315563 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
RRP12-201ENST00000315563 GTF3C3Q9Y5Q9 886 aa14.6□□□□□ -0.07
RRP12-201ENST00000315563 NEFLP07196 543 aa14.57□□□□□ -0.08
RRP12-201ENST00000315563 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
RRP12-201ENST00000315563 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
RRP12-201ENST00000315563 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
RRP12-201ENST00000315563 ZNF316A6NFI3 1004 aaPredicted RBP14.49□□□□□ -0.09
RRP12-201ENST00000315563 BCANQ96GW7 911 aa14.45□□□□□ -0.1
RRP12-201ENST00000315563 ERICH6Q7L0X2 663 aa14.44□□□□□ -0.1
RRP12-201ENST00000315563 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
RRP12-201ENST00000315563 TRIM52Q96A61 297 aa14.44□□□□□ -0.1
RRP12-201ENST00000315563 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
RRP12-201ENST00000315563 MYT1LQ9UL68 1186 aa14.39□□□□□ -0.11
RRP12-201ENST00000315563 FBLN2P98095 1184 aa14.38□□□□□ -0.11
RRP12-201ENST00000315563 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
RRP12-201ENST00000315563 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
RRP12-201ENST00000315563 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
RRP12-201ENST00000315563 MIER1Q8N108 512 aa14.25□□□□□ -0.13
RRP12-201ENST00000315563 CEP162Q5TB80 1403 aa14.25□□□□□ -0.13
RRP12-201ENST00000315563 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
RRP12-201ENST00000315563 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
RRP12-201ENST00000315563 CLIP1P30622 1438 aa14.22□□□□□ -0.13
RRP12-201ENST00000315563 SOGA1O94964 1423 aa14.21□□□□□ -0.14
RRP12-201ENST00000315563 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
RRP12-201ENST00000315563 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
RRP12-201ENST00000315563 ANP32CO43423 234 aa14.19□□□□□ -0.14
RRP12-201ENST00000315563 MROH2BQ7Z745 1585 aa14.18□□□□□ -0.14
RRP12-201ENST00000315563 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
RRP12-201ENST00000315563 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
RRP12-201ENST00000315563 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
RRP12-201ENST00000315563 NACADO15069 1562 aa14.09□□□□□ -0.15
RRP12-201ENST00000315563 MYT1Q01538 1121 aa14.09□□□□□ -0.15
RRP12-201ENST00000315563 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
RRP12-201ENST00000315563 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
RRP12-201ENST00000315563 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
RRP12-201ENST00000315563 FKBP8Q14318 412 aa14.04□□□□□ -0.16
RRP12-201ENST00000315563 SENP3-EIF4A1A0A087X0R7 540 aa14.04□□□□□ -0.16
RRP12-201ENST00000315563 TONSLQ96HA7 1378 aa14.02□□□□□ -0.17
RRP12-201ENST00000315563 RRP7BPQ9NSQ0 103 aa14.02□□□□□ -0.17
RRP12-201ENST00000315563 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
RRP12-201ENST00000315563 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
RRP12-201ENST00000315563 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
RRP12-201ENST00000315563 HNRNPUQ00839 825 aaKnown RBP eCLIP13.99□□□□□ -0.17
RRP12-201ENST00000315563 FAM9BQ8IZU0 186 aa13.98□□□□□ -0.17
RRP12-201ENST00000315563 KANK4Q5T7N3 995 aaPredicted RBP13.98□□□□□ -0.17
RRP12-201ENST00000315563 WIZO95785 1651 aa13.98□□□□□ -0.17
RRP12-201ENST00000315563 SALL2Q9Y467 1007 aaPredicted RBP13.97□□□□□ -0.17
RRP12-201ENST00000315563 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.17
RRP12-201ENST00000315563 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
RRP12-201ENST00000315563 EEA1Q15075 1411 aa13.96□□□□□ -0.18
RRP12-201ENST00000315563 RUSC2Q8N2Y8 1516 aa13.92□□□□□ -0.18
RRP12-201ENST00000315563 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
RRP12-201ENST00000315563 KDM2AQ9Y2K7 1162 aa13.9□□□□□ -0.18
RRP12-201ENST00000315563 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
RRP12-201ENST00000315563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■■□ 22.8
RRP12-201ENST00000315563 KIF27Q86VH2 1401 aa13.88□□□□□ -0.19
RRP12-201ENST00000315563 DAXXQ9UER7 740 aaPredicted RBP13.88□□□□□ -0.19
RRP12-201ENST00000315563 CLSPNQ9HAW4 1339 aa13.86□□□□□ -0.19
RRP12-201ENST00000315563 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
RRP12-201ENST00000315563 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
RRP12-201ENST00000315563 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
RRP12-201ENST00000315563 MRS2Q9HD23 443 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms