RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
SEC16A-204ENST00000313084 SHROOM4Q9ULL8 1493 aa18.06■□□□□ 0.48
SEC16A-204ENST00000313084 DCAF8L2P0C7V8 631 aa17.88■□□□□ 0.45
SEC16A-204ENST00000313084 SUPT5HO00267 1087 aaKnown RBP17.67■□□□□ 0.42
SEC16A-204ENST00000313084 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
SEC16A-204ENST00000313084 CCDC180Q9P1Z9 1646 aa17.11■□□□□ 0.33
SEC16A-204ENST00000313084 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.27
SEC16A-204ENST00000313084 ABCC9O60706 1549 aa16.66■□□□□ 0.26
SEC16A-204ENST00000313084 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
SEC16A-204ENST00000313084 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
SEC16A-204ENST00000313084 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
SEC16A-204ENST00000313084 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
SEC16A-204ENST00000313084 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
SEC16A-204ENST00000313084 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
SEC16A-204ENST00000313084 PCGF6Q9BYE7 350 aa16.42■□□□□ 0.22
SEC16A-204ENST00000313084 TRIM41Q8WV44 630 aa16.27■□□□□ 0.19
SEC16A-204ENST00000313084 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
SEC16A-204ENST00000313084 CECR2Q9BXF3 1484 aa16.19■□□□□ 0.18
SEC16A-204ENST00000313084 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
SEC16A-204ENST00000313084 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
SEC16A-204ENST00000313084 PPARGC1BQ86YN6 1023 aaKnown RBP16.08■□□□□ 0.16
SEC16A-204ENST00000313084 HRCP23327 699 aa16.03■□□□□ 0.16
SEC16A-204ENST00000313084 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.15
SEC16A-204ENST00000313084 NACADO15069 1562 aa16■□□□□ 0.15
SEC16A-204ENST00000313084 TTBK1Q5TCY1 1321 aaPredicted RBP15.97■□□□□ 0.15
SEC16A-204ENST00000313084 WIZO95785 1651 aa15.92■□□□□ 0.14
SEC16A-204ENST00000313084 TRIM26Q12899 539 aaPredicted RBP15.82■□□□□ 0.12
SEC16A-204ENST00000313084 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
SEC16A-204ENST00000313084 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
SEC16A-204ENST00000313084 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
SEC16A-204ENST00000313084 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
SEC16A-204ENST00000313084 CCDC88BA6NC98 1476 aa15.61■□□□□ 0.09
SEC16A-204ENST00000313084 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
SEC16A-204ENST00000313084 UNC13AQ9UPW8 1703 aa15.55■□□□□ 0.08
SEC16A-204ENST00000313084 SOGA1O94964 1423 aa15.53■□□□□ 0.08
SEC16A-204ENST00000313084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
SEC16A-204ENST00000313084 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
SEC16A-204ENST00000313084 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
SEC16A-204ENST00000313084 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
SEC16A-204ENST00000313084 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
SEC16A-204ENST00000313084 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
SEC16A-204ENST00000313084 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
SEC16A-204ENST00000313084 EIF4G1Q04637 1599 aaKnown RBP15.33■□□□□ 0.04
SEC16A-204ENST00000313084 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
SEC16A-204ENST00000313084 CEP162Q5TB80 1403 aa15.33■□□□□ 0.04
SEC16A-204ENST00000313084 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
SEC16A-204ENST00000313084 ZEB1P37275 1124 aaPredicted RBP15.28■□□□□ 0.04
SEC16A-204ENST00000313084 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
SEC16A-204ENST00000313084 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
SEC16A-204ENST00000313084 APLP2Q06481 763 aa15.2■□□□□ 0.02
SEC16A-204ENST00000313084 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
SEC16A-204ENST00000313084 TNIKQ9UKE5 1360 aa15.17■□□□□ 0.02
SEC16A-204ENST00000313084 GOLGA3Q08378 1498 aa15.14■□□□□ 0.01
SEC16A-204ENST00000313084 CLIP1P30622 1438 aa15.1■□□□□ 0.01
SEC16A-204ENST00000313084 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
SEC16A-204ENST00000313084 EEA1Q15075 1411 aa15.07■□□□□ 0
SEC16A-204ENST00000313084 ITGAEP38570 1179 aa15.06■□□□□ 0
SEC16A-204ENST00000313084 ATP1B4Q9UN42 357 aaPredicted RBP15.04■□□□□ -0
SEC16A-204ENST00000313084 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
SEC16A-204ENST00000313084 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
SEC16A-204ENST00000313084 P3H3Q8IVL6 736 aa14.99□□□□□ -0.01
SEC16A-204ENST00000313084 DIEXFQ68CQ4 756 aaKnown RBP14.94□□□□□ -0.02
SEC16A-204ENST00000313084 KANK4Q5T7N3 995 aaPredicted RBP14.93□□□□□ -0.02
SEC16A-204ENST00000313084 YTHDC1Q96MU7 727 aaKnown RBP14.93□□□□□ -0.02
SEC16A-204ENST00000313084 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
SEC16A-204ENST00000313084 VPS8Q8N3P4 1428 aa14.89□□□□□ -0.03
SEC16A-204ENST00000313084 CUX1P39880 1505 aa14.88□□□□□ -0.03
SEC16A-204ENST00000313084 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
SEC16A-204ENST00000313084 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
SEC16A-204ENST00000313084 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
SEC16A-204ENST00000313084 CUX2O14529 1486 aa14.83□□□□□ -0.03
SEC16A-204ENST00000313084 KIF21BO75037 1637 aa14.83□□□□□ -0.04
SEC16A-204ENST00000313084 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
SEC16A-204ENST00000313084 CFTRP13569 1480 aa14.79□□□□□ -0.04
SEC16A-204ENST00000313084 HMGXB3Q12766 1538 aa14.77□□□□□ -0.04
SEC16A-204ENST00000313084 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
SEC16A-204ENST00000313084 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
SEC16A-204ENST00000313084 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
SEC16A-204ENST00000313084 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
SEC16A-204ENST00000313084 NESP48681 1621 aa14.75□□□□□ -0.05
SEC16A-204ENST00000313084 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
SEC16A-204ENST00000313084 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
SEC16A-204ENST00000313084 CC2D2AQ9P2K1 1620 aa14.72□□□□□ -0.05
SEC16A-204ENST00000313084 ARID3CA6NKF2 412 aa14.72□□□□□ -0.05
SEC16A-204ENST00000313084 IGF1RP08069 1367 aa14.71□□□□□ -0.06
SEC16A-204ENST00000313084 CARMIL1Q5VZK9 1371 aa14.71□□□□□ -0.06
SEC16A-204ENST00000313084 FGD5Q6ZNL6 1462 aa14.71□□□□□ -0.06
SEC16A-204ENST00000313084 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.06
SEC16A-204ENST00000313084 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
SEC16A-204ENST00000313084 MIER1Q8N108 512 aa14.67□□□□□ -0.06
SEC16A-204ENST00000313084 FANCD2Q9BXW9 1451 aa14.66□□□□□ -0.06
SEC16A-204ENST00000313084 ARHGAP35Q9NRY4 1499 aa14.65□□□□□ -0.06
SEC16A-204ENST00000313084 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
SEC16A-204ENST00000313084 GTF3C3Q9Y5Q9 886 aa14.63□□□□□ -0.07
SEC16A-204ENST00000313084 ACIN1Q9UKV3 1341 aaKnown RBP14.63□□□□□ -0.07
SEC16A-204ENST00000313084 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
SEC16A-204ENST00000313084 CENPBP07199 599 aaPredicted RBP14.61□□□□□ -0.07
SEC16A-204ENST00000313084 FHOD3Q2V2M9 1422 aa14.59□□□□□ -0.07
SEC16A-204ENST00000313084 CCNB3Q8WWL7 1395 aa14.58□□□□□ -0.08
SEC16A-204ENST00000313084 DHX57Q6P158 1386 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms