RNA–Protein interactions for RNA: ENST00000312210.9

MINDY1-201, Transcript of MINDY lysine 48 deubiquitinase 1, humanhuman

TSL 2 BASIC

Gene MINDY1, Length 2,400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY1-201ENST00000312210 NISCHQ9Y2I1 1504 aa32.96■■■□□ 2.87
MINDY1-201ENST00000312210 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
MINDY1-201ENST00000312210 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
MINDY1-201ENST00000312210 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
MINDY1-201ENST00000312210 CCDC180Q9P1Z9 1646 aa27.79■■■□□ 2.04
MINDY1-201ENST00000312210 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
MINDY1-201ENST00000312210 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
MINDY1-201ENST00000312210 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
MINDY1-201ENST00000312210 HRCP23327 699 aa27.17■■□□□ 1.94
MINDY1-201ENST00000312210 PCGF6Q9BYE7 350 aa27.01■■□□□ 1.92
MINDY1-201ENST00000312210 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
MINDY1-201ENST00000312210 LOC105371045A0A1W2PR82 267 aa26.76■■□□□ 1.87
MINDY1-201ENST00000312210 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.86
MINDY1-201ENST00000312210 ABCC9O60706 1549 aa26.41■■□□□ 1.82
MINDY1-201ENST00000312210 TRIM26Q12899 539 aaPredicted RBP26.32■■□□□ 1.8
MINDY1-201ENST00000312210 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
MINDY1-201ENST00000312210 SCRIBQ14160 1630 aa26.24■■□□□ 1.79
MINDY1-201ENST00000312210 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
MINDY1-201ENST00000312210 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
MINDY1-201ENST00000312210 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
MINDY1-201ENST00000312210 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
MINDY1-201ENST00000312210 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
MINDY1-201ENST00000312210 CECR2Q9BXF3 1484 aa25.8■■□□□ 1.72
MINDY1-201ENST00000312210 NACADO15069 1562 aa25.76■■□□□ 1.71
MINDY1-201ENST00000312210 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
MINDY1-201ENST00000312210 WIZO95785 1651 aa25.57■■□□□ 1.68
MINDY1-201ENST00000312210 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
MINDY1-201ENST00000312210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.32■■□□□ 1.64
MINDY1-201ENST00000312210 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
MINDY1-201ENST00000312210 SCAF1Q9H7N4 1312 aaKnown RBP25.3■■□□□ 1.64
MINDY1-201ENST00000312210 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
MINDY1-201ENST00000312210 ABCC8Q09428 1581 aa25.18■■□□□ 1.62
MINDY1-201ENST00000312210 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
MINDY1-201ENST00000312210 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
MINDY1-201ENST00000312210 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
MINDY1-201ENST00000312210 UNC13AQ9UPW8 1703 aa25.08■■□□□ 1.61
MINDY1-201ENST00000312210 SOGA1O94964 1423 aa25.03■■□□□ 1.6
MINDY1-201ENST00000312210 CEP162Q5TB80 1403 aa25.02■■□□□ 1.6
MINDY1-201ENST00000312210 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
MINDY1-201ENST00000312210 SMARCA2P51531 1590 aa25.01■■□□□ 1.59
MINDY1-201ENST00000312210 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
MINDY1-201ENST00000312210 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
MINDY1-201ENST00000312210 PABPN1Q86U42 306 aaKnown RBP eCLIP24.93■■□□□ 1.58
MINDY1-201ENST00000312210 TNIKQ9UKE5 1360 aa24.91■■□□□ 1.58
MINDY1-201ENST00000312210 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
MINDY1-201ENST00000312210 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
MINDY1-201ENST00000312210 NEUROD1Q13562 356 aa24.9■■□□□ 1.58
MINDY1-201ENST00000312210 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
MINDY1-201ENST00000312210 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
MINDY1-201ENST00000312210 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
MINDY1-201ENST00000312210 EEA1Q15075 1411 aa24.78■■□□□ 1.56
MINDY1-201ENST00000312210 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
MINDY1-201ENST00000312210 GOLGA3Q08378 1498 aa24.71■■□□□ 1.55
MINDY1-201ENST00000312210 GTF3C3Q9Y5Q9 886 aa24.66■■□□□ 1.54
MINDY1-201ENST00000312210 CENPBP07199 599 aaPredicted RBP24.65■■□□□ 1.54
MINDY1-201ENST00000312210 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
MINDY1-201ENST00000312210 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
MINDY1-201ENST00000312210 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
MINDY1-201ENST00000312210 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
MINDY1-201ENST00000312210 CLIP1P30622 1438 aa24.48■■□□□ 1.51
MINDY1-201ENST00000312210 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
MINDY1-201ENST00000312210 KIF21BO75037 1637 aa24.43■■□□□ 1.5
MINDY1-201ENST00000312210 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
MINDY1-201ENST00000312210 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
MINDY1-201ENST00000312210 VPS8Q8N3P4 1428 aa24.39■■□□□ 1.49
MINDY1-201ENST00000312210 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
MINDY1-201ENST00000312210 MIER1Q8N108 512 aa24.35■■□□□ 1.49
MINDY1-201ENST00000312210 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
MINDY1-201ENST00000312210 APLP2Q06481 763 aa24.32■■□□□ 1.48
MINDY1-201ENST00000312210 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
MINDY1-201ENST00000312210 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
MINDY1-201ENST00000312210 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
MINDY1-201ENST00000312210 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
MINDY1-201ENST00000312210 ARAP1Q96P48 1450 aa24.04■■□□□ 1.44
MINDY1-201ENST00000312210 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
MINDY1-201ENST00000312210 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
MINDY1-201ENST00000312210 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
MINDY1-201ENST00000312210 CLSPNQ9HAW4 1339 aa23.96■■□□□ 1.43
MINDY1-201ENST00000312210 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
MINDY1-201ENST00000312210 CUX1P39880 1505 aa23.88■■□□□ 1.41
MINDY1-201ENST00000312210 RRBP1Q9P2E9 1410 aaKnown RBP23.86■■□□□ 1.41
MINDY1-201ENST00000312210 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
MINDY1-201ENST00000312210 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
MINDY1-201ENST00000312210 ITGAEP38570 1179 aa23.8■■□□□ 1.4
MINDY1-201ENST00000312210 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
MINDY1-201ENST00000312210 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
MINDY1-201ENST00000312210 CUX2O14529 1486 aa23.73■■□□□ 1.39
MINDY1-201ENST00000312210 MYT1Q01538 1121 aa23.71■■□□□ 1.39
MINDY1-201ENST00000312210 CFTRP13569 1480 aa23.69■■□□□ 1.38
MINDY1-201ENST00000312210 SUPT16HQ9Y5B9 1047 aaKnown RBP23.67■■□□□ 1.38
MINDY1-201ENST00000312210 RAB3GAP2Q9H2M9 1393 aa23.64■■□□□ 1.37
MINDY1-201ENST00000312210 IGF1RP08069 1367 aa23.6■■□□□ 1.37
MINDY1-201ENST00000312210 KCNH8Q96L42 1107 aa23.58■■□□□ 1.36
MINDY1-201ENST00000312210 MAPKBP1O60336 1514 aa23.57■■□□□ 1.36
MINDY1-201ENST00000312210 TIAM1Q13009 1591 aa23.53■■□□□ 1.36
MINDY1-201ENST00000312210 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
MINDY1-201ENST00000312210 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
MINDY1-201ENST00000312210 SETD5Q9C0A6 1442 aa23.48■■□□□ 1.35
MINDY1-201ENST00000312210 SIN3AQ96ST3 1273 aa23.48■■□□□ 1.35
MINDY1-201ENST00000312210 LRRC9Q6ZRR7 1453 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms