RNA–Protein interactions for RNA: ENST00000311565.4

PPARD-201, Transcript of peroxisome proliferator activated receptor delta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPARD, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARD-201ENST00000311565 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.3
PPARD-201ENST00000311565 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
PPARD-201ENST00000311565 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
PPARD-201ENST00000311565 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
PPARD-201ENST00000311565 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
PPARD-201ENST00000311565 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.65
PPARD-201ENST00000311565 DCAF1Q9Y4B6 1507 aa18.91■□□□□ 0.62
PPARD-201ENST00000311565 ABCC9O60706 1549 aa18.73■□□□□ 0.59
PPARD-201ENST00000311565 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
PPARD-201ENST00000311565 MYO15BQ96JP2 1530 aa18.47■□□□□ 0.55
PPARD-201ENST00000311565 NACADO15069 1562 aa18.37■□□□□ 0.53
PPARD-201ENST00000311565 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
PPARD-201ENST00000311565 RSF1Q96T23 1441 aaPredicted RBP18.21■□□□□ 0.51
PPARD-201ENST00000311565 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
PPARD-201ENST00000311565 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
PPARD-201ENST00000311565 MROH2BQ7Z745 1585 aa18.02■□□□□ 0.47
PPARD-201ENST00000311565 UNC13AQ9UPW8 1703 aa17.91■□□□□ 0.46
PPARD-201ENST00000311565 WIZO95785 1651 aa17.9■□□□□ 0.46
PPARD-201ENST00000311565 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
PPARD-201ENST00000311565 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
PPARD-201ENST00000311565 BAZ1AQ9NRL2 1556 aaPredicted RBP17.78■□□□□ 0.44
PPARD-201ENST00000311565 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
PPARD-201ENST00000311565 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
PPARD-201ENST00000311565 BICRAQ9NZM4 1560 aa17.71■□□□□ 0.43
PPARD-201ENST00000311565 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
PPARD-201ENST00000311565 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
PPARD-201ENST00000311565 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
PPARD-201ENST00000311565 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
PPARD-201ENST00000311565 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
PPARD-201ENST00000311565 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
PPARD-201ENST00000311565 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.39
PPARD-201ENST00000311565 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
PPARD-201ENST00000311565 HRCP23327 699 aa17.36■□□□□ 0.37
PPARD-201ENST00000311565 PPARGC1BQ86YN6 1023 aaKnown RBP17.35■□□□□ 0.37
PPARD-201ENST00000311565 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
PPARD-201ENST00000311565 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
PPARD-201ENST00000311565 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
PPARD-201ENST00000311565 SOGA1O94964 1423 aa17.19■□□□□ 0.34
PPARD-201ENST00000311565 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
PPARD-201ENST00000311565 RUSC2Q8N2Y8 1516 aa17.13■□□□□ 0.33
PPARD-201ENST00000311565 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
PPARD-201ENST00000311565 TTBK1Q5TCY1 1321 aaPredicted RBP17.09■□□□□ 0.33
PPARD-201ENST00000311565 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
PPARD-201ENST00000311565 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
PPARD-201ENST00000311565 NCAPD3P42695 1498 aa17.02■□□□□ 0.32
PPARD-201ENST00000311565 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
PPARD-201ENST00000311565 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
PPARD-201ENST00000311565 EEA1Q15075 1411 aa16.92■□□□□ 0.3
PPARD-201ENST00000311565 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
PPARD-201ENST00000311565 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
PPARD-201ENST00000311565 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
PPARD-201ENST00000311565 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
PPARD-201ENST00000311565 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
PPARD-201ENST00000311565 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
PPARD-201ENST00000311565 CFTRP13569 1480 aa16.81■□□□□ 0.28
PPARD-201ENST00000311565 CUX1P39880 1505 aa16.78■□□□□ 0.28
PPARD-201ENST00000311565 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
PPARD-201ENST00000311565 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
PPARD-201ENST00000311565 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
PPARD-201ENST00000311565 KIF21BO75037 1637 aa16.72■□□□□ 0.27
PPARD-201ENST00000311565 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
PPARD-201ENST00000311565 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
PPARD-201ENST00000311565 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
PPARD-201ENST00000311565 CLIP1P30622 1438 aa16.67■□□□□ 0.26
PPARD-201ENST00000311565 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.26
PPARD-201ENST00000311565 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
PPARD-201ENST00000311565 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
PPARD-201ENST00000311565 NESP48681 1621 aa16.6■□□□□ 0.25
PPARD-201ENST00000311565 PRDM2Q13029 1718 aa16.59■□□□□ 0.25
PPARD-201ENST00000311565 PRXQ9BXM0 1461 aa16.59■□□□□ 0.25
PPARD-201ENST00000311565 FANCD2Q9BXW9 1451 aa16.55■□□□□ 0.24
PPARD-201ENST00000311565 CUX2O14529 1486 aa16.55■□□□□ 0.24
PPARD-201ENST00000311565 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
PPARD-201ENST00000311565 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
PPARD-201ENST00000311565 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
PPARD-201ENST00000311565 IGF1RP08069 1367 aa16.48■□□□□ 0.23
PPARD-201ENST00000311565 APLP2Q06481 763 aa16.47■□□□□ 0.23
PPARD-201ENST00000311565 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
PPARD-201ENST00000311565 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
PPARD-201ENST00000311565 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
PPARD-201ENST00000311565 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
PPARD-201ENST00000311565 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
PPARD-201ENST00000311565 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
PPARD-201ENST00000311565 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
PPARD-201ENST00000311565 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
PPARD-201ENST00000311565 ARHGAP35Q9NRY4 1499 aa16.36■□□□□ 0.21
PPARD-201ENST00000311565 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
PPARD-201ENST00000311565 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
PPARD-201ENST00000311565 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
PPARD-201ENST00000311565 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
PPARD-201ENST00000311565 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
PPARD-201ENST00000311565 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
PPARD-201ENST00000311565 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
PPARD-201ENST00000311565 KIF21AQ7Z4S6 1674 aa16.25■□□□□ 0.19
PPARD-201ENST00000311565 DIEXFQ68CQ4 756 aaKnown RBP16.23■□□□□ 0.19
PPARD-201ENST00000311565 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
PPARD-201ENST00000311565 CENPBP07199 599 aaPredicted RBP16.18■□□□□ 0.18
PPARD-201ENST00000311565 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
PPARD-201ENST00000311565 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
PPARD-201ENST00000311565 ITGAEP38570 1179 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms