RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
MUC4-201ENST00000308466 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.62
MUC4-201ENST00000308466 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
MUC4-201ENST00000308466 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
MUC4-201ENST00000308466 EHMT2Q96KQ7 1210 aa17.46■□□□□ 0.39
MUC4-201ENST00000308466 CHIC1Q5VXU3 224 aa17.42■□□□□ 0.38
MUC4-201ENST00000308466 ZCCHC6Q5VYS8 1495 aaKnown RBP17.37■□□□□ 0.37
MUC4-201ENST00000308466 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
MUC4-201ENST00000308466 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
MUC4-201ENST00000308466 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
MUC4-201ENST00000308466 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
MUC4-201ENST00000308466 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
MUC4-201ENST00000308466 TRIM41Q8WV44 630 aa17.16■□□□□ 0.34
MUC4-201ENST00000308466 ABCC9O60706 1549 aa17.11■□□□□ 0.33
MUC4-201ENST00000308466 HRCP23327 699 aa16.89■□□□□ 0.29
MUC4-201ENST00000308466 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
MUC4-201ENST00000308466 TTBK1Q5TCY1 1321 aaPredicted RBP16.83■□□□□ 0.29
MUC4-201ENST00000308466 PPARGC1BQ86YN6 1023 aaKnown RBP16.81■□□□□ 0.28
MUC4-201ENST00000308466 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
MUC4-201ENST00000308466 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
MUC4-201ENST00000308466 MYT1Q01538 1121 aa16.71■□□□□ 0.27
MUC4-201ENST00000308466 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
MUC4-201ENST00000308466 PABPN1Q86U42 306 aaKnown RBP eCLIP16.61■□□□□ 0.25
MUC4-201ENST00000308466 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
MUC4-201ENST00000308466 RANGAP1P46060 587 aaPredicted RBP16.58■□□□□ 0.24
MUC4-201ENST00000308466 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
MUC4-201ENST00000308466 ZEB1P37275 1124 aaPredicted RBP16.49■□□□□ 0.23
MUC4-201ENST00000308466 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
MUC4-201ENST00000308466 APLP2Q06481 763 aa16.43■□□□□ 0.22
MUC4-201ENST00000308466 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
MUC4-201ENST00000308466 NACADO15069 1562 aa16.32■□□□□ 0.2
MUC4-201ENST00000308466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
MUC4-201ENST00000308466 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
MUC4-201ENST00000308466 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
MUC4-201ENST00000308466 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
MUC4-201ENST00000308466 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
MUC4-201ENST00000308466 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
MUC4-201ENST00000308466 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
MUC4-201ENST00000308466 WIZO95785 1651 aa16.02■□□□□ 0.16
MUC4-201ENST00000308466 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
MUC4-201ENST00000308466 ITGAEP38570 1179 aa15.96■□□□□ 0.15
MUC4-201ENST00000308466 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
MUC4-201ENST00000308466 CENPBP07199 599 aaPredicted RBP15.91■□□□□ 0.14
MUC4-201ENST00000308466 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
MUC4-201ENST00000308466 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
MUC4-201ENST00000308466 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
MUC4-201ENST00000308466 SOGA1O94964 1423 aa15.88■□□□□ 0.13
MUC4-201ENST00000308466 GTF3C3Q9Y5Q9 886 aa15.84■□□□□ 0.13
MUC4-201ENST00000308466 CEP162Q5TB80 1403 aa15.84■□□□□ 0.13
MUC4-201ENST00000308466 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
MUC4-201ENST00000308466 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
MUC4-201ENST00000308466 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
MUC4-201ENST00000308466 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
MUC4-201ENST00000308466 EEA1Q15075 1411 aa15.71■□□□□ 0.1
MUC4-201ENST00000308466 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
MUC4-201ENST00000308466 CLIP1P30622 1438 aa15.69■□□□□ 0.1
MUC4-201ENST00000308466 GOLGA3Q08378 1498 aa15.69■□□□□ 0.1
MUC4-201ENST00000308466 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
MUC4-201ENST00000308466 RUSC2Q8N2Y8 1516 aa15.68■□□□□ 0.1
MUC4-201ENST00000308466 ZNF316A6NFI3 1004 aaPredicted RBP15.68■□□□□ 0.1
MUC4-201ENST00000308466 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
MUC4-201ENST00000308466 BCL11AQ9H165 835 aa15.65■□□□□ 0.1
MUC4-201ENST00000308466 UNC13AQ9UPW8 1703 aa15.64■□□□□ 0.09
MUC4-201ENST00000308466 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
MUC4-201ENST00000308466 NEUROD1Q13562 356 aa15.62■□□□□ 0.09
MUC4-201ENST00000308466 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
MUC4-201ENST00000308466 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
MUC4-201ENST00000308466 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
MUC4-201ENST00000308466 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
MUC4-201ENST00000308466 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
MUC4-201ENST00000308466 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
MUC4-201ENST00000308466 MIER1Q8N108 512 aa15.41■□□□□ 0.06
MUC4-201ENST00000308466 KANK4Q5T7N3 995 aaPredicted RBP15.4■□□□□ 0.06
MUC4-201ENST00000308466 VPS8Q8N3P4 1428 aa15.4■□□□□ 0.06
MUC4-201ENST00000308466 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
MUC4-201ENST00000308466 PRKCSHP14314 528 aaPredicted RBP15.36■□□□□ 0.05
MUC4-201ENST00000308466 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
MUC4-201ENST00000308466 CUX2O14529 1486 aa15.31■□□□□ 0.04
MUC4-201ENST00000308466 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
MUC4-201ENST00000308466 TRIM52Q96A61 297 aa15.28■□□□□ 0.04
MUC4-201ENST00000308466 CARMIL1Q5VZK9 1371 aa15.26■□□□□ 0.03
MUC4-201ENST00000308466 ERICH6Q7L0X2 663 aa15.25■□□□□ 0.03
MUC4-201ENST00000308466 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
MUC4-201ENST00000308466 HIRIP3Q9BW71 556 aaPredicted RBP15.22■□□□□ 0.03
MUC4-201ENST00000308466 FBLN2P98095 1184 aa15.22■□□□□ 0.03
MUC4-201ENST00000308466 DDX10Q13206 875 aaKnown RBP15.2■□□□□ 0.02
MUC4-201ENST00000308466 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
MUC4-201ENST00000308466 NEFLP07196 543 aa15.19■□□□□ 0.02
MUC4-201ENST00000308466 POLR3GLQ9BT43 218 aa15.19■□□□□ 0.02
MUC4-201ENST00000308466 CHIC2Q9UKJ5 165 aa15.18■□□□□ 0.02
MUC4-201ENST00000308466 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
MUC4-201ENST00000308466 SIN3AQ96ST3 1273 aa15.17■□□□□ 0.02
MUC4-201ENST00000308466 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
MUC4-201ENST00000308466 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
MUC4-201ENST00000308466 MTUS2Q5JR59 1369 aa15.15■□□□□ 0.02
MUC4-201ENST00000308466 ANP32EQ9BTT0 268 aa15.15■□□□□ 0.02
MUC4-201ENST00000308466 BCANQ96GW7 911 aa15.13■□□□□ 0.01
MUC4-201ENST00000308466 KIF21BO75037 1637 aa15.12■□□□□ 0.01
MUC4-201ENST00000308466 ANP32CO43423 234 aa15.1■□□□□ 0.01
MUC4-201ENST00000308466 IGF1RP08069 1367 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms