RNA–Protein interactions for RNA: ENST00000306156.7

PRKCE-201, Transcript of protein kinase C epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCE, Length 5,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCE-201ENST00000306156 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
PRKCE-201ENST00000306156 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
PRKCE-201ENST00000306156 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
PRKCE-201ENST00000306156 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
PRKCE-201ENST00000306156 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
PRKCE-201ENST00000306156 APLP2Q06481 763 aa20.63■□□□□ 0.89
PRKCE-201ENST00000306156 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
PRKCE-201ENST00000306156 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
PRKCE-201ENST00000306156 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
PRKCE-201ENST00000306156 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
PRKCE-201ENST00000306156 ATP1B4Q9UN42 357 aaPredicted RBP20.05■□□□□ 0.8
PRKCE-201ENST00000306156 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
PRKCE-201ENST00000306156 UBTFP17480 764 aaKnown RBP19.88■□□□□ 0.77
PRKCE-201ENST00000306156 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
PRKCE-201ENST00000306156 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
PRKCE-201ENST00000306156 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
PRKCE-201ENST00000306156 ABCC9O60706 1549 aa19.43■□□□□ 0.7
PRKCE-201ENST00000306156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
PRKCE-201ENST00000306156 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
PRKCE-201ENST00000306156 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
PRKCE-201ENST00000306156 CENPBP07199 599 aaPredicted RBP19.36■□□□□ 0.69
PRKCE-201ENST00000306156 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
PRKCE-201ENST00000306156 PABPN1Q86U42 306 aaKnown RBP eCLIP19.27■□□□□ 0.68
PRKCE-201ENST00000306156 ERICH6Q7L0X2 663 aa19.2■□□□□ 0.66
PRKCE-201ENST00000306156 ITGAEP38570 1179 aa19.2■□□□□ 0.66
PRKCE-201ENST00000306156 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
PRKCE-201ENST00000306156 NEFLP07196 543 aa19.1■□□□□ 0.65
PRKCE-201ENST00000306156 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
PRKCE-201ENST00000306156 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
PRKCE-201ENST00000306156 LOC105371045A0A1W2PR82 267 aa19.01■□□□□ 0.63
PRKCE-201ENST00000306156 CHIC1Q5VXU3 224 aa19.01■□□□□ 0.63
PRKCE-201ENST00000306156 FAM50AQ14320 339 aaKnown RBP18.82■□□□□ 0.6
PRKCE-201ENST00000306156 SLC4A1APQ9BWU0 796 aaKnown RBP18.8■□□□□ 0.6
PRKCE-201ENST00000306156 FBLN2P98095 1184 aa18.79■□□□□ 0.6
PRKCE-201ENST00000306156 CNGB1Q14028 1251 aaPredicted RBP18.73■□□□□ 0.59
PRKCE-201ENST00000306156 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
PRKCE-201ENST00000306156 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
PRKCE-201ENST00000306156 HRCP23327 699 aa18.64■□□□□ 0.58
PRKCE-201ENST00000306156 DAXXQ9UER7 740 aaPredicted RBP18.56■□□□□ 0.56
PRKCE-201ENST00000306156 NEUROD1Q13562 356 aa18.52■□□□□ 0.55
PRKCE-201ENST00000306156 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
PRKCE-201ENST00000306156 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
PRKCE-201ENST00000306156 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
PRKCE-201ENST00000306156 ZNF326Q5BKZ1 582 aaKnown RBP18.43■□□□□ 0.54
PRKCE-201ENST00000306156 ZCCHC6Q5VYS8 1495 aaKnown RBP18.42■□□□□ 0.54
PRKCE-201ENST00000306156 MYT1Q01538 1121 aa18.41■□□□□ 0.54
PRKCE-201ENST00000306156 BCANQ96GW7 911 aa18.36■□□□□ 0.53
PRKCE-201ENST00000306156 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
PRKCE-201ENST00000306156 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.53
PRKCE-201ENST00000306156 DIEXFQ68CQ4 756 aaKnown RBP18.32■□□□□ 0.52
PRKCE-201ENST00000306156 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
PRKCE-201ENST00000306156 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
PRKCE-201ENST00000306156 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
PRKCE-201ENST00000306156 ESF1Q9H501 851 aaKnown RBP18.22■□□□□ 0.51
PRKCE-201ENST00000306156 ANP32CO43423 234 aa18.21■□□□□ 0.51
PRKCE-201ENST00000306156 NPM1P06748 294 aaKnown RBP eCLIP18.21■□□□□ 0.5
PRKCE-201ENST00000306156 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
PRKCE-201ENST00000306156 SLC24A1O60721 1099 aa18.14■□□□□ 0.49
PRKCE-201ENST00000306156 NEFMP07197 916 aa18.1■□□□□ 0.49
PRKCE-201ENST00000306156 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
PRKCE-201ENST00000306156 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.49
PRKCE-201ENST00000306156 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
PRKCE-201ENST00000306156 CHGAP10645 457 aaKnown RBP18.04■□□□□ 0.48
PRKCE-201ENST00000306156 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
PRKCE-201ENST00000306156 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
PRKCE-201ENST00000306156 NACADO15069 1562 aa18.01■□□□□ 0.47
PRKCE-201ENST00000306156 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
PRKCE-201ENST00000306156 TONSLQ96HA7 1378 aa17.92■□□□□ 0.46
PRKCE-201ENST00000306156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRKCE-201ENST00000306156 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
PRKCE-201ENST00000306156 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
PRKCE-201ENST00000306156 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
PRKCE-201ENST00000306156 MTUS2Q5JR59 1369 aa17.84■□□□□ 0.45
PRKCE-201ENST00000306156 TSPY4P0CV99 314 aa17.83■□□□□ 0.44
PRKCE-201ENST00000306156 TSPY10P0CW01 314 aa17.83■□□□□ 0.44
PRKCE-201ENST00000306156 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
PRKCE-201ENST00000306156 RSF1Q96T23 1441 aaPredicted RBP17.75■□□□□ 0.43
PRKCE-201ENST00000306156 CLIP1P30622 1438 aa17.75■□□□□ 0.43
PRKCE-201ENST00000306156 DCAF1Q9Y4B6 1507 aa17.75■□□□□ 0.43
PRKCE-201ENST00000306156 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
PRKCE-201ENST00000306156 GOLGA3Q08378 1498 aa17.71■□□□□ 0.43
PRKCE-201ENST00000306156 GTF3C3Q9Y5Q9 886 aa17.7■□□□□ 0.42
PRKCE-201ENST00000306156 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
PRKCE-201ENST00000306156 PLEKHD1A6NEE1 506 aa17.69■□□□□ 0.42
PRKCE-201ENST00000306156 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
PRKCE-201ENST00000306156 EEA1Q15075 1411 aa17.68■□□□□ 0.42
PRKCE-201ENST00000306156 KIF27Q86VH2 1401 aa17.65■□□□□ 0.42
PRKCE-201ENST00000306156 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
PRKCE-201ENST00000306156 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
PRKCE-201ENST00000306156 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
PRKCE-201ENST00000306156 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
PRKCE-201ENST00000306156 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
PRKCE-201ENST00000306156 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.41
PRKCE-201ENST00000306156 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
PRKCE-201ENST00000306156 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
PRKCE-201ENST00000306156 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
PRKCE-201ENST00000306156 SENP3Q9H4L4 574 aaPredicted RBP17.54■□□□□ 0.4
PRKCE-201ENST00000306156 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
PRKCE-201ENST00000306156 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.4
PRKCE-201ENST00000306156 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms