RNA–Protein interactions for RNA: ENST00000304177.9

C15orf40-201, Transcript of chromosome 15 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C15orf40, Length 11,244 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf40-201ENST00000304177 DCAF8L2P0C7V8 631 aa20.62■□□□□ 0.89
C15orf40-201ENST00000304177 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
C15orf40-201ENST00000304177 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
C15orf40-201ENST00000304177 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
C15orf40-201ENST00000304177 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
C15orf40-201ENST00000304177 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
C15orf40-201ENST00000304177 TTBK1Q5TCY1 1321 aaPredicted RBP19.21■□□□□ 0.66
C15orf40-201ENST00000304177 APLP2Q06481 763 aa19.11■□□□□ 0.65
C15orf40-201ENST00000304177 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
C15orf40-201ENST00000304177 CENPBP07199 599 aaPredicted RBP18.97■□□□□ 0.63
C15orf40-201ENST00000304177 PCGF6Q9BYE7 350 aa18.96■□□□□ 0.63
C15orf40-201ENST00000304177 MYT1Q01538 1121 aa18.93■□□□□ 0.62
C15orf40-201ENST00000304177 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
C15orf40-201ENST00000304177 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
C15orf40-201ENST00000304177 NEFLP07196 543 aa18.73■□□□□ 0.59
C15orf40-201ENST00000304177 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
C15orf40-201ENST00000304177 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
C15orf40-201ENST00000304177 ATP1B4Q9UN42 357 aaPredicted RBP18.42■□□□□ 0.54
C15orf40-201ENST00000304177 DAXXQ9UER7 740 aaPredicted RBP18.41■□□□□ 0.54
C15orf40-201ENST00000304177 NISCHQ9Y2I1 1504 aa18.3■□□□□ 0.52
C15orf40-201ENST00000304177 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
C15orf40-201ENST00000304177 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
C15orf40-201ENST00000304177 POLR3GLQ9BT43 218 aa18.11■□□□□ 0.49
C15orf40-201ENST00000304177 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
C15orf40-201ENST00000304177 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.47
C15orf40-201ENST00000304177 ZNF316A6NFI3 1004 aaPredicted RBP18.02■□□□□ 0.47
C15orf40-201ENST00000304177 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
C15orf40-201ENST00000304177 HRCP23327 699 aa17.85■□□□□ 0.45
C15orf40-201ENST00000304177 ITGAEP38570 1179 aa17.84■□□□□ 0.45
C15orf40-201ENST00000304177 CLSPNQ9HAW4 1339 aa17.82■□□□□ 0.44
C15orf40-201ENST00000304177 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
C15orf40-201ENST00000304177 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
C15orf40-201ENST00000304177 MYT1LQ9UL68 1186 aa17.74■□□□□ 0.43
C15orf40-201ENST00000304177 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
C15orf40-201ENST00000304177 BCANQ96GW7 911 aa17.67■□□□□ 0.42
C15orf40-201ENST00000304177 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
C15orf40-201ENST00000304177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.41
C15orf40-201ENST00000304177 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
C15orf40-201ENST00000304177 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
C15orf40-201ENST00000304177 GTF3C3Q9Y5Q9 886 aa17.36■□□□□ 0.37
C15orf40-201ENST00000304177 LOC105371045A0A1W2PR82 267 aa17.35■□□□□ 0.37
C15orf40-201ENST00000304177 EIF5BO60841 1220 aaKnown RBP17.34■□□□□ 0.37
C15orf40-201ENST00000304177 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
C15orf40-201ENST00000304177 ZBTB47Q9UFB7 747 aaPredicted RBP17.31■□□□□ 0.36
C15orf40-201ENST00000304177 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
C15orf40-201ENST00000304177 ZNF326Q5BKZ1 582 aaKnown RBP17.24■□□□□ 0.35
C15orf40-201ENST00000304177 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
C15orf40-201ENST00000304177 NEUROD1Q13562 356 aa17.23■□□□□ 0.35
C15orf40-201ENST00000304177 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
C15orf40-201ENST00000304177 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
C15orf40-201ENST00000304177 ANP32AP39687 249 aaKnown RBP17.17■□□□□ 0.34
C15orf40-201ENST00000304177 ANP32CO43423 234 aa17.13■□□□□ 0.33
C15orf40-201ENST00000304177 TRIM52Q96A61 297 aa17.13■□□□□ 0.33
C15orf40-201ENST00000304177 ANP32BQ92688 251 aaKnown RBP17.04■□□□□ 0.32
C15orf40-201ENST00000304177 ARXQ96QS3 562 aa17.01■□□□□ 0.31
C15orf40-201ENST00000304177 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
C15orf40-201ENST00000304177 GLIPR1L2Q4G1C9 344 aa17■□□□□ 0.31
C15orf40-201ENST00000304177 NBR1Q14596 966 aa16.96■□□□□ 0.31
C15orf40-201ENST00000304177 ACIN1Q9UKV3 1341 aaKnown RBP16.9■□□□□ 0.3
C15orf40-201ENST00000304177 NEFMP07197 916 aa16.84■□□□□ 0.29
C15orf40-201ENST00000304177 FKBP8Q14318 412 aa16.78■□□□□ 0.28
C15orf40-201ENST00000304177 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
C15orf40-201ENST00000304177 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
C15orf40-201ENST00000304177 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
C15orf40-201ENST00000304177 SALL2Q9Y467 1007 aaPredicted RBP16.59■□□□□ 0.25
C15orf40-201ENST00000304177 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.24
C15orf40-201ENST00000304177 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
C15orf40-201ENST00000304177 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
C15orf40-201ENST00000304177 CDK11BP21127 795 aaKnown RBP16.56■□□□□ 0.24
C15orf40-201ENST00000304177 FBLN2P98095 1184 aa16.52■□□□□ 0.24
C15orf40-201ENST00000304177 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
C15orf40-201ENST00000304177 ZNF777Q9ULD5 760 aaPredicted RBP16.48■□□□□ 0.23
C15orf40-201ENST00000304177 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
C15orf40-201ENST00000304177 TNNT2P45379 298 aaPredicted RBP16.48■□□□□ 0.23
C15orf40-201ENST00000304177 TPRNQ4KMQ1 711 aa16.47■□□□□ 0.23
C15orf40-201ENST00000304177 P3H3Q8IVL6 736 aa16.47■□□□□ 0.23
C15orf40-201ENST00000304177 TONSLQ96HA7 1378 aa16.46■□□□□ 0.23
C15orf40-201ENST00000304177 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
C15orf40-201ENST00000304177 RTN4Q9NQC3 1192 aaKnown RBP16.43■□□□□ 0.22
C15orf40-201ENST00000304177 PTMAP06454 111 aaKnown RBP16.42■□□□□ 0.22
C15orf40-201ENST00000304177 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
C15orf40-201ENST00000304177 MYH16Q9H6N6 1097 aa16.41■□□□□ 0.22
C15orf40-201ENST00000304177 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
C15orf40-201ENST00000304177 NAP1L5Q96NT1 182 aaPredicted RBP16.39■□□□□ 0.21
C15orf40-201ENST00000304177 A0A0G2JS52 829 aa16.39■□□□□ 0.21
C15orf40-201ENST00000304177 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
C15orf40-201ENST00000304177 NCLP19338 710 aaKnown RBP16.36■□□□□ 0.21
C15orf40-201ENST00000304177 TULP1O00294 542 aaPredicted RBP16.36■□□□□ 0.21
C15orf40-201ENST00000304177 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
C15orf40-201ENST00000304177 BECN1Q14457 450 aa16.35■□□□□ 0.21
C15orf40-201ENST00000304177 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
C15orf40-201ENST00000304177 TMC1Q8TDI8 760 aa16.31■□□□□ 0.2
C15orf40-201ENST00000304177 DNTTIP2Q5QJE6 756 aaKnown RBP16.31■□□□□ 0.2
C15orf40-201ENST00000304177 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
C15orf40-201ENST00000304177 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
C15orf40-201ENST00000304177 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
C15orf40-201ENST00000304177 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
C15orf40-201ENST00000304177 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
C15orf40-201ENST00000304177 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
C15orf40-201ENST00000304177 PLEKHG5O94827 1062 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms