RNA–Protein interactions for RNA: ENST00000302127.4

KCND3-201, Transcript of potassium voltage-gated channel subfamily D member 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene KCND3, Length 2,659 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCND3-201ENST00000302127 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
KCND3-201ENST00000302127 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
KCND3-201ENST00000302127 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
KCND3-201ENST00000302127 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
KCND3-201ENST00000302127 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
KCND3-201ENST00000302127 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
KCND3-201ENST00000302127 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
KCND3-201ENST00000302127 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
KCND3-201ENST00000302127 HRCP23327 699 aa24.61■■□□□ 1.53
KCND3-201ENST00000302127 PCGF6Q9BYE7 350 aa24.38■■□□□ 1.49
KCND3-201ENST00000302127 DCAF1Q9Y4B6 1507 aa24.29■■□□□ 1.48
KCND3-201ENST00000302127 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
KCND3-201ENST00000302127 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
KCND3-201ENST00000302127 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
KCND3-201ENST00000302127 ABCC9O60706 1549 aa23.76■■□□□ 1.39
KCND3-201ENST00000302127 RSF1Q96T23 1441 aaPredicted RBP23.7■■□□□ 1.38
KCND3-201ENST00000302127 SCRIBQ14160 1630 aa23.7■■□□□ 1.38
KCND3-201ENST00000302127 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
KCND3-201ENST00000302127 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
KCND3-201ENST00000302127 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
KCND3-201ENST00000302127 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
KCND3-201ENST00000302127 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
KCND3-201ENST00000302127 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
KCND3-201ENST00000302127 NACADO15069 1562 aa23.39■■□□□ 1.33
KCND3-201ENST00000302127 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
KCND3-201ENST00000302127 MROH2BQ7Z745 1585 aa23.19■■□□□ 1.3
KCND3-201ENST00000302127 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
KCND3-201ENST00000302127 WIZO95785 1651 aa23.06■■□□□ 1.28
KCND3-201ENST00000302127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.86■■□□□ 1.25
KCND3-201ENST00000302127 BAZ1AQ9NRL2 1556 aaPredicted RBP22.82■■□□□ 1.24
KCND3-201ENST00000302127 TTBK1Q5TCY1 1321 aaPredicted RBP22.79■■□□□ 1.24
KCND3-201ENST00000302127 CCER1Q8TC90 406 aaPredicted RBP22.78■■□□□ 1.24
KCND3-201ENST00000302127 EIF4G1Q04637 1599 aaKnown RBP22.73■■□□□ 1.23
KCND3-201ENST00000302127 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
KCND3-201ENST00000302127 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
KCND3-201ENST00000302127 ACIN1Q9UKV3 1341 aaKnown RBP22.68■■□□□ 1.22
KCND3-201ENST00000302127 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
KCND3-201ENST00000302127 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
KCND3-201ENST00000302127 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
KCND3-201ENST00000302127 SOGA1O94964 1423 aa22.59■■□□□ 1.21
KCND3-201ENST00000302127 MYT1Q01538 1121 aa22.56■■□□□ 1.2
KCND3-201ENST00000302127 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
KCND3-201ENST00000302127 SMARCA4P51532 1647 aa22.55■■□□□ 1.2
KCND3-201ENST00000302127 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
KCND3-201ENST00000302127 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
KCND3-201ENST00000302127 DIEXFQ68CQ4 756 aaKnown RBP22.52■■□□□ 1.2
KCND3-201ENST00000302127 UBTFP17480 764 aaKnown RBP22.51■■□□□ 1.19
KCND3-201ENST00000302127 CSRNP3Q8WYN3 585 aa22.47■■□□□ 1.19
KCND3-201ENST00000302127 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
KCND3-201ENST00000302127 GTF3C3Q9Y5Q9 886 aa22.46■■□□□ 1.19
KCND3-201ENST00000302127 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
KCND3-201ENST00000302127 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
KCND3-201ENST00000302127 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
KCND3-201ENST00000302127 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
KCND3-201ENST00000302127 EEA1Q15075 1411 aa22.36■■□□□ 1.17
KCND3-201ENST00000302127 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
KCND3-201ENST00000302127 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
KCND3-201ENST00000302127 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
KCND3-201ENST00000302127 RANGAP1P46060 587 aaPredicted RBP22.16■■□□□ 1.14
KCND3-201ENST00000302127 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.13
KCND3-201ENST00000302127 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
KCND3-201ENST00000302127 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
KCND3-201ENST00000302127 CLIP1P30622 1438 aa22.08■■□□□ 1.13
KCND3-201ENST00000302127 YTHDC1Q96MU7 727 aaKnown RBP22.06■■□□□ 1.12
KCND3-201ENST00000302127 ATAD2BQ9ULI0 1458 aa22.02■■□□□ 1.12
KCND3-201ENST00000302127 APLP2Q06481 763 aa22.01■■□□□ 1.11
KCND3-201ENST00000302127 RAPGEF2Q9Y4G8 1499 aa21.99■■□□□ 1.11
KCND3-201ENST00000302127 KIF21BO75037 1637 aa21.98■■□□□ 1.11
KCND3-201ENST00000302127 MIER1Q8N108 512 aa21.97■■□□□ 1.11
KCND3-201ENST00000302127 VPS8Q8N3P4 1428 aa21.97■■□□□ 1.11
KCND3-201ENST00000302127 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
KCND3-201ENST00000302127 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
KCND3-201ENST00000302127 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
KCND3-201ENST00000302127 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
KCND3-201ENST00000302127 NCAPD3P42695 1498 aa21.67■■□□□ 1.06
KCND3-201ENST00000302127 PRXQ9BXM0 1461 aa21.65■■□□□ 1.06
KCND3-201ENST00000302127 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
KCND3-201ENST00000302127 DHX57Q6P158 1386 aaKnown RBP21.64■■□□□ 1.06
KCND3-201ENST00000302127 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
KCND3-201ENST00000302127 BIVM-ERCC5R4GMW8 1640 aa21.59■■□□□ 1.05
KCND3-201ENST00000302127 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.05
KCND3-201ENST00000302127 ITGAEP38570 1179 aa21.57■■□□□ 1.04
KCND3-201ENST00000302127 CUX1P39880 1505 aa21.55■■□□□ 1.04
KCND3-201ENST00000302127 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
KCND3-201ENST00000302127 RRBP1Q9P2E9 1410 aaKnown RBP21.47■■□□□ 1.03
KCND3-201ENST00000302127 CCNB3Q8WWL7 1395 aa21.44■■□□□ 1.02
KCND3-201ENST00000302127 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
KCND3-201ENST00000302127 SUPT16HQ9Y5B9 1047 aaKnown RBP21.43■■□□□ 1.02
KCND3-201ENST00000302127 CFTRP13569 1480 aa21.41■■□□□ 1.02
KCND3-201ENST00000302127 CUX2O14529 1486 aa21.38■■□□□ 1.01
KCND3-201ENST00000302127 IGF1RP08069 1367 aa21.32■■□□□ 1
KCND3-201ENST00000302127 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
KCND3-201ENST00000302127 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
KCND3-201ENST00000302127 ANP32EQ9BTT0 268 aa21.29■■□□□ 1
KCND3-201ENST00000302127 KCNH8Q96L42 1107 aa21.27■■□□□ 1
KCND3-201ENST00000302127 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
KCND3-201ENST00000302127 ATP1B4Q9UN42 357 aaPredicted RBP21.25■□□□□ 0.99
KCND3-201ENST00000302127 FAM50AQ14320 339 aaKnown RBP21.24■□□□□ 0.99
KCND3-201ENST00000302127 CARMIL1Q5VZK9 1371 aa21.24■□□□□ 0.99
KCND3-201ENST00000302127 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms