RNA–Protein interactions for RNA: ENST00000301773.9

RAB3IL1-201, Transcript of RAB3A interacting protein like 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3IL1, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1-201ENST00000301773 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
RAB3IL1-201ENST00000301773 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.2
RAB3IL1-201ENST00000301773 ZCCHC6Q5VYS8 1495 aaKnown RBP28.18■■■□□ 2.1
RAB3IL1-201ENST00000301773 SHROOM4Q9ULL8 1493 aa27.73■■■□□ 2.03
RAB3IL1-201ENST00000301773 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
RAB3IL1-201ENST00000301773 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
RAB3IL1-201ENST00000301773 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
RAB3IL1-201ENST00000301773 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
RAB3IL1-201ENST00000301773 ABCC9O60706 1549 aa26.66■■□□□ 1.86
RAB3IL1-201ENST00000301773 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
RAB3IL1-201ENST00000301773 NACADO15069 1562 aa26.61■■□□□ 1.85
RAB3IL1-201ENST00000301773 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
RAB3IL1-201ENST00000301773 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
RAB3IL1-201ENST00000301773 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
RAB3IL1-201ENST00000301773 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.75
RAB3IL1-201ENST00000301773 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
RAB3IL1-201ENST00000301773 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
RAB3IL1-201ENST00000301773 WIZO95785 1651 aa25.73■■□□□ 1.71
RAB3IL1-201ENST00000301773 BAZ1AQ9NRL2 1556 aaPredicted RBP25.7■■□□□ 1.71
RAB3IL1-201ENST00000301773 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
RAB3IL1-201ENST00000301773 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
RAB3IL1-201ENST00000301773 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
RAB3IL1-201ENST00000301773 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
RAB3IL1-201ENST00000301773 TRIM41Q8WV44 630 aa25.31■■□□□ 1.64
RAB3IL1-201ENST00000301773 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
RAB3IL1-201ENST00000301773 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
RAB3IL1-201ENST00000301773 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
RAB3IL1-201ENST00000301773 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
RAB3IL1-201ENST00000301773 CCDC88BA6NC98 1476 aa25.14■■□□□ 1.62
RAB3IL1-201ENST00000301773 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
RAB3IL1-201ENST00000301773 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
RAB3IL1-201ENST00000301773 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.57
RAB3IL1-201ENST00000301773 PCGF6Q9BYE7 350 aa24.85■■□□□ 1.57
RAB3IL1-201ENST00000301773 BAZ1BQ9UIG0 1483 aaKnown RBP24.8■■□□□ 1.56
RAB3IL1-201ENST00000301773 HRCP23327 699 aa24.71■■□□□ 1.55
RAB3IL1-201ENST00000301773 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
RAB3IL1-201ENST00000301773 HMGXB3Q12766 1538 aa24.6■■□□□ 1.53
RAB3IL1-201ENST00000301773 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.52
RAB3IL1-201ENST00000301773 EEA1Q15075 1411 aa24.57■■□□□ 1.52
RAB3IL1-201ENST00000301773 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
RAB3IL1-201ENST00000301773 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
RAB3IL1-201ENST00000301773 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
RAB3IL1-201ENST00000301773 SOGA1O94964 1423 aa24.53■■□□□ 1.52
RAB3IL1-201ENST00000301773 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
RAB3IL1-201ENST00000301773 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
RAB3IL1-201ENST00000301773 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
RAB3IL1-201ENST00000301773 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
RAB3IL1-201ENST00000301773 TNIKQ9UKE5 1360 aa24.34■■□□□ 1.49
RAB3IL1-201ENST00000301773 PRDM2Q13029 1718 aa24.31■■□□□ 1.48
RAB3IL1-201ENST00000301773 KIF21BO75037 1637 aa24.31■■□□□ 1.48
RAB3IL1-201ENST00000301773 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
RAB3IL1-201ENST00000301773 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
RAB3IL1-201ENST00000301773 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
RAB3IL1-201ENST00000301773 CFTRP13569 1480 aa24.2■■□□□ 1.46
RAB3IL1-201ENST00000301773 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
RAB3IL1-201ENST00000301773 UBTFP17480 764 aaKnown RBP24.12■■□□□ 1.45
RAB3IL1-201ENST00000301773 CUX1P39880 1505 aa24.11■■□□□ 1.45
RAB3IL1-201ENST00000301773 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
RAB3IL1-201ENST00000301773 RAPGEF2Q9Y4G8 1499 aa24.01■■□□□ 1.43
RAB3IL1-201ENST00000301773 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
RAB3IL1-201ENST00000301773 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
RAB3IL1-201ENST00000301773 CADPSQ9ULU8 1353 aa23.95■■□□□ 1.42
RAB3IL1-201ENST00000301773 CLIP1P30622 1438 aa23.93■■□□□ 1.42
RAB3IL1-201ENST00000301773 PRXQ9BXM0 1461 aa23.92■■□□□ 1.42
RAB3IL1-201ENST00000301773 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
RAB3IL1-201ENST00000301773 VPS8Q8N3P4 1428 aa23.83■■□□□ 1.4
RAB3IL1-201ENST00000301773 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
RAB3IL1-201ENST00000301773 FANCD2Q9BXW9 1451 aa23.72■■□□□ 1.39
RAB3IL1-201ENST00000301773 TTBK1Q5TCY1 1321 aaPredicted RBP23.69■■□□□ 1.38
RAB3IL1-201ENST00000301773 CUX2O14529 1486 aa23.68■■□□□ 1.38
RAB3IL1-201ENST00000301773 DNMBPQ6XZF7 1577 aa23.67■■□□□ 1.38
RAB3IL1-201ENST00000301773 ARAP1Q96P48 1450 aa23.64■■□□□ 1.37
RAB3IL1-201ENST00000301773 LAMC3Q9Y6N6 1575 aa23.63■■□□□ 1.37
RAB3IL1-201ENST00000301773 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
RAB3IL1-201ENST00000301773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.59■■□□□ 1.37
RAB3IL1-201ENST00000301773 NESP48681 1621 aa23.59■■□□□ 1.37
RAB3IL1-201ENST00000301773 IGF1RP08069 1367 aa23.59■■□□□ 1.37
RAB3IL1-201ENST00000301773 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
RAB3IL1-201ENST00000301773 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
RAB3IL1-201ENST00000301773 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
RAB3IL1-201ENST00000301773 APLP2Q06481 763 aa23.54■■□□□ 1.36
RAB3IL1-201ENST00000301773 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
RAB3IL1-201ENST00000301773 ARHGAP35Q9NRY4 1499 aa23.5■■□□□ 1.35
RAB3IL1-201ENST00000301773 POLA1P09884 1462 aaPredicted RBP23.5■■□□□ 1.35
RAB3IL1-201ENST00000301773 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
RAB3IL1-201ENST00000301773 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
RAB3IL1-201ENST00000301773 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
RAB3IL1-201ENST00000301773 CUL7Q14999 1698 aa23.43■■□□□ 1.34
RAB3IL1-201ENST00000301773 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
RAB3IL1-201ENST00000301773 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
RAB3IL1-201ENST00000301773 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
RAB3IL1-201ENST00000301773 CTTNBP2Q8WZ74 1663 aa23.36■■□□□ 1.33
RAB3IL1-201ENST00000301773 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
RAB3IL1-201ENST00000301773 MAP3K1Q13233 1512 aa23.3■■□□□ 1.32
RAB3IL1-201ENST00000301773 HNRNPUL2Q1KMD3 747 aaKnown RBP23.28■■□□□ 1.32
RAB3IL1-201ENST00000301773 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
RAB3IL1-201ENST00000301773 TIAM1Q13009 1591 aa23.26■■□□□ 1.31
RAB3IL1-201ENST00000301773 RRBP1Q9P2E9 1410 aaKnown RBP23.24■■□□□ 1.31
RAB3IL1-201ENST00000301773 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
RAB3IL1-201ENST00000301773 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms