RNA–Protein interactions for RNA: ENST00000297591.9

VIRMA-201, Transcript of vir like m6A methyltransferase associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIRMA, Length 6,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-201ENST00000297591 NISCHQ9Y2I1 1504 aa9.17□□□□□ -0.94
VIRMA-201ENST00000297591 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
VIRMA-201ENST00000297591 SHROOM4Q9ULL8 1493 aa7.95□□□□□ -1.14
VIRMA-201ENST00000297591 FAM9AQ8IZU1 332 aaPredicted RBP7.87□□□□□ -1.15
VIRMA-201ENST00000297591 SUPT5HO00267 1087 aaKnown RBP7.79□□□□□ -1.16
VIRMA-201ENST00000297591 ZCCHC6Q5VYS8 1495 aaKnown RBP7.73□□□□□ -1.17
VIRMA-201ENST00000297591 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
VIRMA-201ENST00000297591 AEBP2Q6ZN18 517 aaPredicted RBP7.7□□□□□ -1.18
VIRMA-201ENST00000297591 MYT1LQ9UL68 1186 aa7.61□□□□□ -1.19
VIRMA-201ENST00000297591 CHIC1Q5VXU3 224 aa7.5□□□□□ -1.21
VIRMA-201ENST00000297591 EHMT2Q96KQ7 1210 aa7.46□□□□□ -1.22
VIRMA-201ENST00000297591 DCAF1Q9Y4B6 1507 aa7.45□□□□□ -1.22
VIRMA-201ENST00000297591 MYO15BQ96JP2 1530 aa7.44□□□□□ -1.22
VIRMA-201ENST00000297591 PLPPR3Q6T4P5 718 aa7.39□□□□□ -1.23
VIRMA-201ENST00000297591 TTBK1Q5TCY1 1321 aaPredicted RBP7.36□□□□□ -1.23
VIRMA-201ENST00000297591 SCRIBQ14160 1630 aa7.35□□□□□ -1.23
VIRMA-201ENST00000297591 ABCC9O60706 1549 aa7.35□□□□□ -1.23
VIRMA-201ENST00000297591 LOC105371045A0A1W2PR82 267 aa7.34□□□□□ -1.23
VIRMA-201ENST00000297591 PCGF6Q9BYE7 350 aa7.28□□□□□ -1.24
VIRMA-201ENST00000297591 RSF1Q96T23 1441 aaPredicted RBP7.28□□□□□ -1.24
VIRMA-201ENST00000297591 TRHP20396 242 aaPredicted RBP7.25□□□□□ -1.25
VIRMA-201ENST00000297591 TRIM41Q8WV44 630 aa7.24□□□□□ -1.25
VIRMA-201ENST00000297591 ATP1B4Q9UN42 357 aaPredicted RBP7.24□□□□□ -1.25
VIRMA-201ENST00000297591 DCAF8L1A6NGE4 600 aa7.23□□□□□ -1.25
VIRMA-201ENST00000297591 CECR2Q9BXF3 1484 aa7.22□□□□□ -1.25
VIRMA-201ENST00000297591 HRCP23327 699 aa7.19□□□□□ -1.26
VIRMA-201ENST00000297591 SCAF1Q9H7N4 1312 aaKnown RBP7.19□□□□□ -1.26
VIRMA-201ENST00000297591 NACADO15069 1562 aa7.19□□□□□ -1.26
VIRMA-201ENST00000297591 RB1CC1Q8TDY2 1594 aa7.18□□□□□ -1.26
VIRMA-201ENST00000297591 BCANQ96GW7 911 aa7.18□□□□□ -1.26
VIRMA-201ENST00000297591 MROH2BQ7Z745 1585 aa7.16□□□□□ -1.26
VIRMA-201ENST00000297591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.16□□□□□ -1.26
VIRMA-201ENST00000297591 HNRNPUL2Q1KMD3 747 aaKnown RBP7.16□□□□□ -1.26
VIRMA-201ENST00000297591 PHF23Q9BUL5 403 aaPredicted RBP7.15□□□□□ -1.27
VIRMA-201ENST00000297591 PPARGC1BQ86YN6 1023 aaKnown RBP7.14□□□□□ -1.27
VIRMA-201ENST00000297591 ESF1Q9H501 851 aaKnown RBP7.14□□□□□ -1.27
VIRMA-201ENST00000297591 SENP3Q9H4L4 574 aaPredicted RBP7.12□□□□□ -1.27
VIRMA-201ENST00000297591 WIZO95785 1651 aa7.11□□□□□ -1.27
VIRMA-201ENST00000297591 A0A0G2JS52 829 aa7.09□□□□□ -1.27
VIRMA-201ENST00000297591 PABPN1Q86U42 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
VIRMA-201ENST00000297591 TRIM26Q12899 539 aaPredicted RBP7.08□□□□□ -1.28
VIRMA-201ENST00000297591 FBLN2P98095 1184 aa7.05□□□□□ -1.28
VIRMA-201ENST00000297591 RANGAP1P46060 587 aaPredicted RBP7.04□□□□□ -1.28
VIRMA-201ENST00000297591 APLP2Q06481 763 aa7.02□□□□□ -1.28
VIRMA-201ENST00000297591 BAZ1AQ9NRL2 1556 aaPredicted RBP7.02□□□□□ -1.29
VIRMA-201ENST00000297591 MYT1Q01538 1121 aa6.99□□□□□ -1.29
VIRMA-201ENST00000297591 FOXD1Q16676 465 aa6.99□□□□□ -1.29
VIRMA-201ENST00000297591 SLC4A1APQ9BWU0 796 aaKnown RBP6.99□□□□□ -1.29
VIRMA-201ENST00000297591 CCDC88BA6NC98 1476 aa6.98□□□□□ -1.29
VIRMA-201ENST00000297591 SMARCA4P51532 1647 aa6.97□□□□□ -1.29
VIRMA-201ENST00000297591 ABCC8Q09428 1581 aa6.97□□□□□ -1.29
VIRMA-201ENST00000297591 UNC13AQ9UPW8 1703 aa6.97□□□□□ -1.29
VIRMA-201ENST00000297591 NPM1P06748 294 aaKnown RBP eCLIP6.97□□□□□ -1.29
VIRMA-201ENST00000297591 TOP2AP11388 1531 aaKnown RBP6.95□□□□□ -1.3
VIRMA-201ENST00000297591 SLC24A1O60721 1099 aa6.93□□□□□ -1.3
VIRMA-201ENST00000297591 SMARCA2P51531 1590 aa6.93□□□□□ -1.3
VIRMA-201ENST00000297591 EIF4G1Q04637 1599 aaKnown RBP6.93□□□□□ -1.3
VIRMA-201ENST00000297591 SOGA1O94964 1423 aa6.92□□□□□ -1.3
VIRMA-201ENST00000297591 BICRAQ9NZM4 1560 aa6.92□□□□□ -1.3
VIRMA-201ENST00000297591 UBTFP17480 764 aaKnown RBP6.9□□□□□ -1.31
VIRMA-201ENST00000297591 HAP1P54257 671 aaPredicted RBP6.9□□□□□ -1.31
VIRMA-201ENST00000297591 RUSC2Q8N2Y8 1516 aa6.9□□□□□ -1.31
VIRMA-201ENST00000297591 CSRNP3Q8WYN3 585 aa6.88□□□□□ -1.31
VIRMA-201ENST00000297591 ZEB1P37275 1124 aaPredicted RBP6.87□□□□□ -1.31
VIRMA-201ENST00000297591 ARID4BQ4LE39 1312 aaPredicted RBP6.86□□□□□ -1.31
VIRMA-201ENST00000297591 C14orf37Q86TY3 774 aa6.85□□□□□ -1.31
VIRMA-201ENST00000297591 CEP162Q5TB80 1403 aa6.84□□□□□ -1.31
VIRMA-201ENST00000297591 WRNQ14191 1432 aaPredicted RBP eCLIP6.84□□□□□ -1.31
VIRMA-201ENST00000297591 ATAD2BQ9ULI0 1458 aa6.84□□□□□ -1.32
VIRMA-201ENST00000297591 CCER1Q8TC90 406 aaPredicted RBP6.83□□□□□ -1.32
VIRMA-201ENST00000297591 STAG3Q9UJ98 1225 aa6.82□□□□□ -1.32
VIRMA-201ENST00000297591 BAZ1BQ9UIG0 1483 aaKnown RBP6.82□□□□□ -1.32
VIRMA-201ENST00000297591 TNIKQ9UKE5 1360 aa6.81□□□□□ -1.32
VIRMA-201ENST00000297591 PLEKHG5O94827 1062 aa6.81□□□□□ -1.32
VIRMA-201ENST00000297591 KRI1Q8N9T8 703 aaKnown RBP6.81□□□□□ -1.32
VIRMA-201ENST00000297591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.8□□□□□ -1.326e-8■■□□□ 14.4
VIRMA-201ENST00000297591 PEG3Q9GZU2 1588 aa6.79□□□□□ -1.32
VIRMA-201ENST00000297591 SYNJ1O43426 1573 aa6.79□□□□□ -1.32
VIRMA-201ENST00000297591 EEA1Q15075 1411 aa6.78□□□□□ -1.32
VIRMA-201ENST00000297591 GOLGA3Q08378 1498 aa6.77□□□□□ -1.33
VIRMA-201ENST00000297591 CFAP44Q96MT7 982 aa6.76□□□□□ -1.33
VIRMA-201ENST00000297591 MEX3CQ5U5Q3 659 aaKnown RBP6.76□□□□□ -1.33
VIRMA-201ENST00000297591 RAPGEF2Q9Y4G8 1499 aa6.73□□□□□ -1.33
VIRMA-201ENST00000297591 CLIP1P30622 1438 aa6.73□□□□□ -1.33
VIRMA-201ENST00000297591 CEP164Q9UPV0 1460 aa6.73□□□□□ -1.33
VIRMA-201ENST00000297591 KLHL34Q8N239 644 aa6.72□□□□□ -1.33
VIRMA-201ENST00000297591 NPHP1O15259 732 aa6.72□□□□□ -1.33
VIRMA-201ENST00000297591 ZBTB7CA1YPR0 619 aa6.7□□□□□ -1.34
VIRMA-201ENST00000297591 NPM2Q86SE8 214 aaKnown RBP6.7□□□□□ -1.34
VIRMA-201ENST00000297591 NCAPD3P42695 1498 aa6.69□□□□□ -1.34
VIRMA-201ENST00000297591 KIF21BO75037 1637 aa6.68□□□□□ -1.34
VIRMA-201ENST00000297591 TOP2BQ02880 1626 aa6.67□□□□□ -1.34
VIRMA-201ENST00000297591 VPS8Q8N3P4 1428 aa6.67□□□□□ -1.34
VIRMA-201ENST00000297591 CCDC9Q9Y3X0 531 aaKnown RBP6.66□□□□□ -1.34
VIRMA-201ENST00000297591 DIEXFQ68CQ4 756 aaKnown RBP6.66□□□□□ -1.34
VIRMA-201ENST00000297591 CUX1P39880 1505 aa6.65□□□□□ -1.34
VIRMA-201ENST00000297591 PELP1Q8IZL8 1130 aaKnown RBP6.64□□□□□ -1.35
VIRMA-201ENST00000297591 KANK4Q5T7N3 995 aaPredicted RBP6.64□□□□□ -1.35
VIRMA-201ENST00000297591 HMGXB3Q12766 1538 aa6.64□□□□□ -1.35
VIRMA-201ENST00000297591 SF3B2Q13435 895 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms