RNA–Protein interactions for RNA: ENST00000296702.9

TCERG1-201, Transcript of transcription elongation regulator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCERG1, Length 4,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCERG1-201ENST00000296702 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
TCERG1-201ENST00000296702 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
TCERG1-201ENST00000296702 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
TCERG1-201ENST00000296702 SUPT5HO00267 1087 aaKnown RBP19.31■□□□□ 0.68
TCERG1-201ENST00000296702 CCDC180Q9P1Z9 1646 aa18.44■□□□□ 0.54
TCERG1-201ENST00000296702 ZCCHC6Q5VYS8 1495 aaKnown RBP18.38■□□□□ 0.53
TCERG1-201ENST00000296702 ABCC9O60706 1549 aa18.34■□□□□ 0.53
TCERG1-201ENST00000296702 EHMT2Q96KQ7 1210 aa18.13■□□□□ 0.49
TCERG1-201ENST00000296702 FAM9AQ8IZU1 332 aaPredicted RBP18.01■□□□□ 0.47
TCERG1-201ENST00000296702 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
TCERG1-201ENST00000296702 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
TCERG1-201ENST00000296702 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
TCERG1-201ENST00000296702 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
TCERG1-201ENST00000296702 DCAF1Q9Y4B6 1507 aa17.7■□□□□ 0.42
TCERG1-201ENST00000296702 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
TCERG1-201ENST00000296702 PCGF6Q9BYE7 350 aa17.64■□□□□ 0.41
TCERG1-201ENST00000296702 NACADO15069 1562 aa17.51■□□□□ 0.39
TCERG1-201ENST00000296702 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
TCERG1-201ENST00000296702 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
TCERG1-201ENST00000296702 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
TCERG1-201ENST00000296702 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
TCERG1-201ENST00000296702 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
TCERG1-201ENST00000296702 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
TCERG1-201ENST00000296702 PPARGC1BQ86YN6 1023 aaKnown RBP17.31■□□□□ 0.36
TCERG1-201ENST00000296702 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.36
TCERG1-201ENST00000296702 APLP2Q06481 763 aa17.21■□□□□ 0.35
TCERG1-201ENST00000296702 TRIM26Q12899 539 aaPredicted RBP17.14■□□□□ 0.33
TCERG1-201ENST00000296702 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
TCERG1-201ENST00000296702 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
TCERG1-201ENST00000296702 HRCP23327 699 aa16.99■□□□□ 0.31
TCERG1-201ENST00000296702 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
TCERG1-201ENST00000296702 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
TCERG1-201ENST00000296702 WIZO95785 1651 aa16.92■□□□□ 0.3
TCERG1-201ENST00000296702 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
TCERG1-201ENST00000296702 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.29
TCERG1-201ENST00000296702 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
TCERG1-201ENST00000296702 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
TCERG1-201ENST00000296702 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
TCERG1-201ENST00000296702 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
TCERG1-201ENST00000296702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
TCERG1-201ENST00000296702 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
TCERG1-201ENST00000296702 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
TCERG1-201ENST00000296702 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
TCERG1-201ENST00000296702 ITGAEP38570 1179 aa16.61■□□□□ 0.25
TCERG1-201ENST00000296702 SOGA1O94964 1423 aa16.6■□□□□ 0.25
TCERG1-201ENST00000296702 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
TCERG1-201ENST00000296702 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
TCERG1-201ENST00000296702 EEA1Q15075 1411 aa16.51■□□□□ 0.23
TCERG1-201ENST00000296702 P3H3Q8IVL6 736 aa16.51■□□□□ 0.23
TCERG1-201ENST00000296702 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
TCERG1-201ENST00000296702 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
TCERG1-201ENST00000296702 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
TCERG1-201ENST00000296702 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
TCERG1-201ENST00000296702 CLIP1P30622 1438 aa16.41■□□□□ 0.22
TCERG1-201ENST00000296702 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
TCERG1-201ENST00000296702 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
TCERG1-201ENST00000296702 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
TCERG1-201ENST00000296702 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
TCERG1-201ENST00000296702 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
TCERG1-201ENST00000296702 FBLN2P98095 1184 aa16.3■□□□□ 0.2
TCERG1-201ENST00000296702 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
TCERG1-201ENST00000296702 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
TCERG1-201ENST00000296702 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
TCERG1-201ENST00000296702 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
TCERG1-201ENST00000296702 CUX2O14529 1486 aa16.22■□□□□ 0.19
TCERG1-201ENST00000296702 YTHDC1Q96MU7 727 aaKnown RBP16.16■□□□□ 0.18
TCERG1-201ENST00000296702 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
TCERG1-201ENST00000296702 CARMIL1Q5VZK9 1371 aa16.15■□□□□ 0.18
TCERG1-201ENST00000296702 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
TCERG1-201ENST00000296702 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
TCERG1-201ENST00000296702 CENPBP07199 599 aaPredicted RBP16.1■□□□□ 0.17
TCERG1-201ENST00000296702 NEUROD1Q13562 356 aa16.08■□□□□ 0.17
TCERG1-201ENST00000296702 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
TCERG1-201ENST00000296702 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
TCERG1-201ENST00000296702 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
TCERG1-201ENST00000296702 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
TCERG1-201ENST00000296702 CFTRP13569 1480 aa16.04■□□□□ 0.16
TCERG1-201ENST00000296702 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
TCERG1-201ENST00000296702 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
TCERG1-201ENST00000296702 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
TCERG1-201ENST00000296702 TRIM52Q96A61 297 aa16■□□□□ 0.15
TCERG1-201ENST00000296702 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
TCERG1-201ENST00000296702 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
TCERG1-201ENST00000296702 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
TCERG1-201ENST00000296702 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
TCERG1-201ENST00000296702 MTUS2Q5JR59 1369 aa15.96■□□□□ 0.15
TCERG1-201ENST00000296702 FGD5Q6ZNL6 1462 aa15.96■□□□□ 0.14
TCERG1-201ENST00000296702 IGF1RP08069 1367 aa15.95■□□□□ 0.14
TCERG1-201ENST00000296702 NESP48681 1621 aa15.94■□□□□ 0.14
TCERG1-201ENST00000296702 ERCC6Q03468 1493 aa15.93■□□□□ 0.14
TCERG1-201ENST00000296702 CUX1P39880 1505 aa15.92■□□□□ 0.14
TCERG1-201ENST00000296702 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
TCERG1-201ENST00000296702 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
TCERG1-201ENST00000296702 ZNF777Q9ULD5 760 aaPredicted RBP15.9■□□□□ 0.14
TCERG1-201ENST00000296702 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
TCERG1-201ENST00000296702 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
TCERG1-201ENST00000296702 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
TCERG1-201ENST00000296702 FHAD1B1AJZ9 1412 aa15.85■□□□□ 0.13
TCERG1-201ENST00000296702 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.13
TCERG1-201ENST00000296702 KIF21BO75037 1637 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms