RNA–Protein interactions for RNA: ENST00000295124.8

CCDC138-201, Transcript of coiled-coil domain containing 138, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC138, Length 2,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-201ENST00000295124 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
CCDC138-201ENST00000295124 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
CCDC138-201ENST00000295124 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
CCDC138-201ENST00000295124 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
CCDC138-201ENST00000295124 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
CCDC138-201ENST00000295124 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
CCDC138-201ENST00000295124 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
CCDC138-201ENST00000295124 MYO15BQ96JP2 1530 aa21.85■■□□□ 1.09
CCDC138-201ENST00000295124 ABCC9O60706 1549 aa21.76■■□□□ 1.07
CCDC138-201ENST00000295124 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
CCDC138-201ENST00000295124 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
CCDC138-201ENST00000295124 NACADO15069 1562 aa21.59■■□□□ 1.05
CCDC138-201ENST00000295124 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
CCDC138-201ENST00000295124 RB1CC1Q8TDY2 1594 aa21.27■■□□□ 1
CCDC138-201ENST00000295124 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
CCDC138-201ENST00000295124 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
CCDC138-201ENST00000295124 LOC105371045A0A1W2PR82 267 aa21.08■□□□□ 0.96
CCDC138-201ENST00000295124 WIZO95785 1651 aa20.99■□□□□ 0.95
CCDC138-201ENST00000295124 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
CCDC138-201ENST00000295124 BAZ1AQ9NRL2 1556 aaPredicted RBP20.94■□□□□ 0.94
CCDC138-201ENST00000295124 UNC13AQ9UPW8 1703 aa20.86■□□□□ 0.93
CCDC138-201ENST00000295124 PABPN1Q86U42 306 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCDC138-201ENST00000295124 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
CCDC138-201ENST00000295124 PCGF6Q9BYE7 350 aa20.77■□□□□ 0.92
CCDC138-201ENST00000295124 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
CCDC138-201ENST00000295124 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
CCDC138-201ENST00000295124 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
CCDC138-201ENST00000295124 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
CCDC138-201ENST00000295124 EIF4G1Q04637 1599 aaKnown RBP20.61■□□□□ 0.89
CCDC138-201ENST00000295124 HRCP23327 699 aa20.6■□□□□ 0.89
CCDC138-201ENST00000295124 SMARCA2P51531 1590 aa20.56■□□□□ 0.88
CCDC138-201ENST00000295124 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
CCDC138-201ENST00000295124 TRIM26Q12899 539 aaPredicted RBP20.46■□□□□ 0.87
CCDC138-201ENST00000295124 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
CCDC138-201ENST00000295124 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
CCDC138-201ENST00000295124 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
CCDC138-201ENST00000295124 BAZ1BQ9UIG0 1483 aaKnown RBP20.26■□□□□ 0.83
CCDC138-201ENST00000295124 SOGA1O94964 1423 aa20.24■□□□□ 0.83
CCDC138-201ENST00000295124 PPARGC1BQ86YN6 1023 aaKnown RBP20.19■□□□□ 0.82
CCDC138-201ENST00000295124 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
CCDC138-201ENST00000295124 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.82
CCDC138-201ENST00000295124 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
CCDC138-201ENST00000295124 EEA1Q15075 1411 aa20.11■□□□□ 0.81
CCDC138-201ENST00000295124 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
CCDC138-201ENST00000295124 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
CCDC138-201ENST00000295124 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
CCDC138-201ENST00000295124 CEP162Q5TB80 1403 aa20.02■□□□□ 0.79
CCDC138-201ENST00000295124 UBTFP17480 764 aaKnown RBP20■□□□□ 0.79
CCDC138-201ENST00000295124 HMGXB3Q12766 1538 aa19.96■□□□□ 0.79
CCDC138-201ENST00000295124 GOLGA3Q08378 1498 aa19.94■□□□□ 0.78
CCDC138-201ENST00000295124 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
CCDC138-201ENST00000295124 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
CCDC138-201ENST00000295124 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
CCDC138-201ENST00000295124 TTBK1Q5TCY1 1321 aaPredicted RBP19.81■□□□□ 0.76
CCDC138-201ENST00000295124 KIF21BO75037 1637 aa19.8■□□□□ 0.76
CCDC138-201ENST00000295124 CFTRP13569 1480 aa19.78■□□□□ 0.76
CCDC138-201ENST00000295124 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
CCDC138-201ENST00000295124 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
CCDC138-201ENST00000295124 CUX1P39880 1505 aa19.71■□□□□ 0.75
CCDC138-201ENST00000295124 CLIP1P30622 1438 aa19.71■□□□□ 0.75
CCDC138-201ENST00000295124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
CCDC138-201ENST00000295124 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
CCDC138-201ENST00000295124 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
CCDC138-201ENST00000295124 PRXQ9BXM0 1461 aa19.62■□□□□ 0.73
CCDC138-201ENST00000295124 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
CCDC138-201ENST00000295124 VPS8Q8N3P4 1428 aa19.59■□□□□ 0.73
CCDC138-201ENST00000295124 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
CCDC138-201ENST00000295124 KIF27Q86VH2 1401 aa19.58■□□□□ 0.73
CCDC138-201ENST00000295124 ERICH3Q5RHP9 1530 aa19.55■□□□□ 0.72
CCDC138-201ENST00000295124 APLP2Q06481 763 aa19.49■□□□□ 0.71
CCDC138-201ENST00000295124 PRDM2Q13029 1718 aa19.46■□□□□ 0.71
CCDC138-201ENST00000295124 CUX2O14529 1486 aa19.43■□□□□ 0.7
CCDC138-201ENST00000295124 IGF1RP08069 1367 aa19.42■□□□□ 0.7
CCDC138-201ENST00000295124 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
CCDC138-201ENST00000295124 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
CCDC138-201ENST00000295124 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
CCDC138-201ENST00000295124 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
CCDC138-201ENST00000295124 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
CCDC138-201ENST00000295124 NESP48681 1621 aa19.33■□□□□ 0.68
CCDC138-201ENST00000295124 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
CCDC138-201ENST00000295124 KANK4Q5T7N3 995 aaPredicted RBP19.3■□□□□ 0.68
CCDC138-201ENST00000295124 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
CCDC138-201ENST00000295124 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
CCDC138-201ENST00000295124 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
CCDC138-201ENST00000295124 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
CCDC138-201ENST00000295124 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
CCDC138-201ENST00000295124 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
CCDC138-201ENST00000295124 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
CCDC138-201ENST00000295124 URB2Q14146 1524 aaKnown RBP19.12■□□□□ 0.65
CCDC138-201ENST00000295124 RRBP1Q9P2E9 1410 aaKnown RBP19.1■□□□□ 0.65
CCDC138-201ENST00000295124 P3H3Q8IVL6 736 aa19.08■□□□□ 0.65
CCDC138-201ENST00000295124 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
CCDC138-201ENST00000295124 DIEXFQ68CQ4 756 aaKnown RBP19.07■□□□□ 0.64
CCDC138-201ENST00000295124 TDRD9Q8NDG6 1382 aaKnown RBP19.05■□□□□ 0.64
CCDC138-201ENST00000295124 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
CCDC138-201ENST00000295124 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.64
CCDC138-201ENST00000295124 MAP3K1Q13233 1512 aa19.01■□□□□ 0.63
CCDC138-201ENST00000295124 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
CCDC138-201ENST00000295124 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
CCDC138-201ENST00000295124 CUL7Q14999 1698 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms