RNA–Protein interactions for RNA: ENST00000282588.6

ITGA1-201, Transcript of integrin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA1, Length 10,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-201ENST00000282588 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
ITGA1-201ENST00000282588 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
ITGA1-201ENST00000282588 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
ITGA1-201ENST00000282588 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
ITGA1-201ENST00000282588 CHIC1Q5VXU3 224 aa11.55□□□□□ -0.56
ITGA1-201ENST00000282588 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.58
ITGA1-201ENST00000282588 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
ITGA1-201ENST00000282588 RANGAP1P46060 587 aaPredicted RBP11.37□□□□□ -0.59
ITGA1-201ENST00000282588 APLP2Q06481 763 aa11.18□□□□□ -0.62
ITGA1-201ENST00000282588 SUPT5HO00267 1087 aaKnown RBP11.18□□□□□ -0.62
ITGA1-201ENST00000282588 PLPPR3Q6T4P5 718 aa11.16□□□□□ -0.62
ITGA1-201ENST00000282588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.05□□□□□ -0.64
ITGA1-201ENST00000282588 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
ITGA1-201ENST00000282588 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
ITGA1-201ENST00000282588 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
ITGA1-201ENST00000282588 BCANQ96GW7 911 aa10.91□□□□□ -0.66
ITGA1-201ENST00000282588 SLC24A1O60721 1099 aa10.9□□□□□ -0.66
ITGA1-201ENST00000282588 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
ITGA1-201ENST00000282588 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
ITGA1-201ENST00000282588 A0A0G2JS52 829 aa10.76□□□□□ -0.69
ITGA1-201ENST00000282588 SENP3Q9H4L4 574 aaPredicted RBP10.73□□□□□ -0.69
ITGA1-201ENST00000282588 FBLN2P98095 1184 aa10.7□□□□□ -0.7
ITGA1-201ENST00000282588 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
ITGA1-201ENST00000282588 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
ITGA1-201ENST00000282588 AEBP2Q6ZN18 517 aaPredicted RBP10.63□□□□□ -0.71
ITGA1-201ENST00000282588 PLEKHG5O94827 1062 aa10.6□□□□□ -0.71
ITGA1-201ENST00000282588 ESF1Q9H501 851 aaKnown RBP10.59□□□□□ -0.71
ITGA1-201ENST00000282588 BCL11AQ9H165 835 aa10.59□□□□□ -0.71
ITGA1-201ENST00000282588 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.73
ITGA1-201ENST00000282588 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
ITGA1-201ENST00000282588 TRHP20396 242 aaPredicted RBP10.49□□□□□ -0.73
ITGA1-201ENST00000282588 ITGAEP38570 1179 aa10.47□□□□□ -0.73
ITGA1-201ENST00000282588 MYT1Q01538 1121 aa10.42□□□□□ -0.74
ITGA1-201ENST00000282588 STAG3Q9UJ98 1225 aa10.38□□□□□ -0.75
ITGA1-201ENST00000282588 PCGF6Q9BYE7 350 aa10.35□□□□□ -0.75
ITGA1-201ENST00000282588 ZBTB7CA1YPR0 619 aa10.34□□□□□ -0.75
ITGA1-201ENST00000282588 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
ITGA1-201ENST00000282588 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
ITGA1-201ENST00000282588 NCBP3Q53F19 620 aaKnown RBP10.31□□□□□ -0.76
ITGA1-201ENST00000282588 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
ITGA1-201ENST00000282588 PHF23Q9BUL5 403 aaPredicted RBP10.29□□□□□ -0.76
ITGA1-201ENST00000282588 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
ITGA1-201ENST00000282588 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
ITGA1-201ENST00000282588 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
ITGA1-201ENST00000282588 CCER1Q8TC90 406 aaPredicted RBP10.25□□□□□ -0.77
ITGA1-201ENST00000282588 ARID3CA6NKF2 412 aa10.24□□□□□ -0.77
ITGA1-201ENST00000282588 ARID4BQ4LE39 1312 aaPredicted RBP10.24□□□□□ -0.77
ITGA1-201ENST00000282588 NISCHQ9Y2I1 1504 aa10.24□□□□□ -0.77
ITGA1-201ENST00000282588 CHGAP10645 457 aaKnown RBP10.22□□□□□ -0.77
ITGA1-201ENST00000282588 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
ITGA1-201ENST00000282588 PPARGC1BQ86YN6 1023 aaKnown RBP10.21□□□□□ -0.77
ITGA1-201ENST00000282588 ARXQ96QS3 562 aa10.2□□□□□ -0.78
ITGA1-201ENST00000282588 NPHP1O15259 732 aa10.2□□□□□ -0.78
ITGA1-201ENST00000282588 CLSPNQ9HAW4 1339 aa10.19□□□□□ -0.78
ITGA1-201ENST00000282588 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
ITGA1-201ENST00000282588 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
ITGA1-201ENST00000282588 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
ITGA1-201ENST00000282588 ZNF326Q5BKZ1 582 aaKnown RBP10.12□□□□□ -0.79
ITGA1-201ENST00000282588 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
ITGA1-201ENST00000282588 NEFMP07197 916 aa10.1□□□□□ -0.79
ITGA1-201ENST00000282588 NEFLP07196 543 aa10.08□□□□□ -0.8
ITGA1-201ENST00000282588 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.07□□□□□ -0.8
ITGA1-201ENST00000282588 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
ITGA1-201ENST00000282588 YTHDC1Q96MU7 727 aaKnown RBP10.05□□□□□ -0.8
ITGA1-201ENST00000282588 LMOD2Q6P5Q4 547 aa10.04□□□□□ -0.8
ITGA1-201ENST00000282588 ZNF777Q9ULD5 760 aaPredicted RBP10.04□□□□□ -0.8
ITGA1-201ENST00000282588 FAM50AQ14320 339 aaKnown RBP10.01□□□□□ -0.81
ITGA1-201ENST00000282588 CCDC9Q9Y3X0 531 aaKnown RBP9.97□□□□□ -0.81
ITGA1-201ENST00000282588 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
ITGA1-201ENST00000282588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.826e-7■■□□□ 12.8
ITGA1-201ENST00000282588 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
ITGA1-201ENST00000282588 ZNF316A6NFI3 1004 aaPredicted RBP9.91□□□□□ -0.82
ITGA1-201ENST00000282588 ABCC9O60706 1549 aa9.91□□□□□ -0.82
ITGA1-201ENST00000282588 CDK11BP21127 795 aaKnown RBP9.9□□□□□ -0.83
ITGA1-201ENST00000282588 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.83
ITGA1-201ENST00000282588 PPP1R15AO75807 674 aaPredicted RBP9.89□□□□□ -0.83
ITGA1-201ENST00000282588 P3H3Q8IVL6 736 aa9.87□□□□□ -0.83
ITGA1-201ENST00000282588 MEX3CQ5U5Q3 659 aaKnown RBP9.86□□□□□ -0.83
ITGA1-201ENST00000282588 MLECQ14165 292 aa9.84□□□□□ -0.83
ITGA1-201ENST00000282588 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
ITGA1-201ENST00000282588 CLSTN1O94985 981 aa9.82□□□□□ -0.84
ITGA1-201ENST00000282588 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
ITGA1-201ENST00000282588 NEUROD1Q13562 356 aa9.81□□□□□ -0.84
ITGA1-201ENST00000282588 KCNH8Q96L42 1107 aa9.8□□□□□ -0.84
ITGA1-201ENST00000282588 MSH5O43196 834 aa9.79□□□□□ -0.84
ITGA1-201ENST00000282588 ISY1Q9ULR0 285 aaKnown RBP9.79□□□□□ -0.84
ITGA1-201ENST00000282588 CFAP44Q96MT7 982 aa9.76□□□□□ -0.85
ITGA1-201ENST00000282588 TMX4Q9H1E5 349 aaPredicted RBP9.74□□□□□ -0.85
ITGA1-201ENST00000282588 GOLGA2Q08379 1002 aa9.72□□□□□ -0.85
ITGA1-201ENST00000282588 PPP1R1BQ9UD71 204 aaPredicted RBP9.72□□□□□ -0.85
ITGA1-201ENST00000282588 G3V3G9 751 aa9.7□□□□□ -0.86
ITGA1-201ENST00000282588 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
ITGA1-201ENST00000282588 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
ITGA1-201ENST00000282588 AMER1Q5JTC6 1135 aaPredicted RBP9.68□□□□□ -0.86
ITGA1-201ENST00000282588 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
ITGA1-201ENST00000282588 FKBP8Q14318 412 aa9.67□□□□□ -0.86
ITGA1-201ENST00000282588 SOX12O15370 315 aa9.63□□□□□ -0.87
ITGA1-201ENST00000282588 PPM1GO15355 546 aaPredicted RBP9.63□□□□□ -0.87
ITGA1-201ENST00000282588 ZNF330Q9Y3S2 320 aaPredicted RBP9.62□□□□□ -0.87
ITGA1-201ENST00000282588 FOXD1Q16676 465 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms