RNA–Protein interactions for RNA: ENST00000280560.12

ABCB9-201, Transcript of ATP binding cassette subfamily B member 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCB9, Length 3,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB9-201ENST00000280560 NISCHQ9Y2I1 1504 aa27.56■■■□□ 2
ABCB9-201ENST00000280560 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
ABCB9-201ENST00000280560 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
ABCB9-201ENST00000280560 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
ABCB9-201ENST00000280560 ZCCHC6Q5VYS8 1495 aaKnown RBP23.22■■□□□ 1.31
ABCB9-201ENST00000280560 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
ABCB9-201ENST00000280560 DCAF1Q9Y4B6 1507 aa22.43■■□□□ 1.18
ABCB9-201ENST00000280560 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
ABCB9-201ENST00000280560 ABCC9O60706 1549 aa22.22■■□□□ 1.15
ABCB9-201ENST00000280560 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
ABCB9-201ENST00000280560 MYO15BQ96JP2 1530 aa22.06■■□□□ 1.12
ABCB9-201ENST00000280560 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.08
ABCB9-201ENST00000280560 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
ABCB9-201ENST00000280560 NACADO15069 1562 aa21.74■■□□□ 1.07
ABCB9-201ENST00000280560 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
ABCB9-201ENST00000280560 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
ABCB9-201ENST00000280560 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
ABCB9-201ENST00000280560 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
ABCB9-201ENST00000280560 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
ABCB9-201ENST00000280560 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
ABCB9-201ENST00000280560 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
ABCB9-201ENST00000280560 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
ABCB9-201ENST00000280560 WIZO95785 1651 aa21.36■■□□□ 1.01
ABCB9-201ENST00000280560 HRCP23327 699 aa21.33■■□□□ 1.01
ABCB9-201ENST00000280560 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
ABCB9-201ENST00000280560 MYT1Q01538 1121 aa21.23■□□□□ 0.99
ABCB9-201ENST00000280560 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
ABCB9-201ENST00000280560 UNC13AQ9UPW8 1703 aa21.13■□□□□ 0.97
ABCB9-201ENST00000280560 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
ABCB9-201ENST00000280560 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
ABCB9-201ENST00000280560 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
ABCB9-201ENST00000280560 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
ABCB9-201ENST00000280560 TOP2AP11388 1531 aaKnown RBP20.92■□□□□ 0.94
ABCB9-201ENST00000280560 BICRAQ9NZM4 1560 aa20.9■□□□□ 0.94
ABCB9-201ENST00000280560 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
ABCB9-201ENST00000280560 SMARCA2P51531 1590 aa20.83■□□□□ 0.93
ABCB9-201ENST00000280560 EIF4G1Q04637 1599 aaKnown RBP20.79■□□□□ 0.92
ABCB9-201ENST00000280560 TTBK1Q5TCY1 1321 aaPredicted RBP20.68■□□□□ 0.9
ABCB9-201ENST00000280560 SOGA1O94964 1423 aa20.66■□□□□ 0.9
ABCB9-201ENST00000280560 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
ABCB9-201ENST00000280560 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
ABCB9-201ENST00000280560 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.89
ABCB9-201ENST00000280560 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.88
ABCB9-201ENST00000280560 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
ABCB9-201ENST00000280560 CSRNP3Q8WYN3 585 aa20.53■□□□□ 0.88
ABCB9-201ENST00000280560 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
ABCB9-201ENST00000280560 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
ABCB9-201ENST00000280560 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
ABCB9-201ENST00000280560 CEP162Q5TB80 1403 aa20.42■□□□□ 0.86
ABCB9-201ENST00000280560 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
ABCB9-201ENST00000280560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
ABCB9-201ENST00000280560 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.85
ABCB9-201ENST00000280560 EEA1Q15075 1411 aa20.32■□□□□ 0.84
ABCB9-201ENST00000280560 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
ABCB9-201ENST00000280560 GOLGA3Q08378 1498 aa20.27■□□□□ 0.84
ABCB9-201ENST00000280560 CCER1Q8TC90 406 aaPredicted RBP20.24■□□□□ 0.83
ABCB9-201ENST00000280560 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
ABCB9-201ENST00000280560 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
ABCB9-201ENST00000280560 RAPGEF2Q9Y4G8 1499 aa20.13■□□□□ 0.81
ABCB9-201ENST00000280560 CLIP1P30622 1438 aa20.11■□□□□ 0.81
ABCB9-201ENST00000280560 HMGXB3Q12766 1538 aa20.08■□□□□ 0.8
ABCB9-201ENST00000280560 TOP2BQ02880 1626 aa20.06■□□□□ 0.8
ABCB9-201ENST00000280560 APLP2Q06481 763 aa20.04■□□□□ 0.8
ABCB9-201ENST00000280560 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
ABCB9-201ENST00000280560 KIF21BO75037 1637 aa20.03■□□□□ 0.8
ABCB9-201ENST00000280560 CUX1P39880 1505 aa20■□□□□ 0.79
ABCB9-201ENST00000280560 CFTRP13569 1480 aa19.97■□□□□ 0.79
ABCB9-201ENST00000280560 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
ABCB9-201ENST00000280560 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
ABCB9-201ENST00000280560 ACIN1Q9UKV3 1341 aaKnown RBP19.9■□□□□ 0.78
ABCB9-201ENST00000280560 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
ABCB9-201ENST00000280560 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
ABCB9-201ENST00000280560 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
ABCB9-201ENST00000280560 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
ABCB9-201ENST00000280560 PRXQ9BXM0 1461 aa19.84■□□□□ 0.77
ABCB9-201ENST00000280560 NEUROD1Q13562 356 aa19.81■□□□□ 0.76
ABCB9-201ENST00000280560 CUX2O14529 1486 aa19.8■□□□□ 0.76
ABCB9-201ENST00000280560 BCL11AQ9H165 835 aa19.77■□□□□ 0.76
ABCB9-201ENST00000280560 KANK4Q5T7N3 995 aaPredicted RBP19.77■□□□□ 0.75
ABCB9-201ENST00000280560 ERICH3Q5RHP9 1530 aa19.75■□□□□ 0.75
ABCB9-201ENST00000280560 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
ABCB9-201ENST00000280560 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
ABCB9-201ENST00000280560 NESP48681 1621 aa19.7■□□□□ 0.74
ABCB9-201ENST00000280560 IGF1RP08069 1367 aa19.7■□□□□ 0.74
ABCB9-201ENST00000280560 CENPBP07199 599 aaPredicted RBP19.69■□□□□ 0.74
ABCB9-201ENST00000280560 P3H3Q8IVL6 736 aa19.69■□□□□ 0.74
ABCB9-201ENST00000280560 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
ABCB9-201ENST00000280560 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
ABCB9-201ENST00000280560 ITGAEP38570 1179 aa19.67■□□□□ 0.74
ABCB9-201ENST00000280560 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
ABCB9-201ENST00000280560 CARMIL1Q5VZK9 1371 aa19.65■□□□□ 0.74
ABCB9-201ENST00000280560 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
ABCB9-201ENST00000280560 PRDM2Q13029 1718 aa19.63■□□□□ 0.73
ABCB9-201ENST00000280560 RAD54L2Q9Y4B4 1467 aa19.62■□□□□ 0.73
ABCB9-201ENST00000280560 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
ABCB9-201ENST00000280560 PRKCSHP14314 528 aaPredicted RBP19.57■□□□□ 0.72
ABCB9-201ENST00000280560 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
ABCB9-201ENST00000280560 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
ABCB9-201ENST00000280560 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
ABCB9-201ENST00000280560 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms