RNA–Protein interactions for RNA: ENST00000274400.9

GTF2H2-201, Transcript of general transcription factor IIH subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H2, Length 4,336 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H2-201ENST00000274400 NISCHQ9Y2I1 1504 aa17.73■□□□□ 0.43
GTF2H2-201ENST00000274400 DCAF8L2P0C7V8 631 aa15.94■□□□□ 0.14
GTF2H2-201ENST00000274400 ABCC9O60706 1549 aa15.58■□□□□ 0.08
GTF2H2-201ENST00000274400 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
GTF2H2-201ENST00000274400 RB1CC1Q8TDY2 1594 aa15.02■□□□□ -0
GTF2H2-201ENST00000274400 NACADO15069 1562 aa14.94□□□□□ -0.02
GTF2H2-201ENST00000274400 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
GTF2H2-201ENST00000274400 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
GTF2H2-201ENST00000274400 ZCCHC6Q5VYS8 1495 aaKnown RBP14.67□□□□□ -0.06
GTF2H2-201ENST00000274400 DCAF1Q9Y4B6 1507 aa14.63□□□□□ -0.07
GTF2H2-201ENST00000274400 SHROOM4Q9ULL8 1493 aa14.53□□□□□ -0.08
GTF2H2-201ENST00000274400 SCRIBQ14160 1630 aa14.42□□□□□ -0.1
GTF2H2-201ENST00000274400 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
GTF2H2-201ENST00000274400 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
GTF2H2-201ENST00000274400 BAZ1AQ9NRL2 1556 aaPredicted RBP13.94□□□□□ -0.18
GTF2H2-201ENST00000274400 SMARCA2P51531 1590 aa13.93□□□□□ -0.18
GTF2H2-201ENST00000274400 FAM9AQ8IZU1 332 aaPredicted RBP13.93□□□□□ -0.18
GTF2H2-201ENST00000274400 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
GTF2H2-201ENST00000274400 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
GTF2H2-201ENST00000274400 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
GTF2H2-201ENST00000274400 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.2
GTF2H2-201ENST00000274400 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
GTF2H2-201ENST00000274400 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
GTF2H2-201ENST00000274400 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
GTF2H2-201ENST00000274400 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
GTF2H2-201ENST00000274400 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
GTF2H2-201ENST00000274400 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
GTF2H2-201ENST00000274400 SMARCA4P51532 1647 aa13.63□□□□□ -0.23
GTF2H2-201ENST00000274400 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.23
GTF2H2-201ENST00000274400 HMGXB3Q12766 1538 aa13.58□□□□□ -0.24
GTF2H2-201ENST00000274400 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
GTF2H2-201ENST00000274400 MROH2BQ7Z745 1585 aa13.52□□□□□ -0.25
GTF2H2-201ENST00000274400 FBLN2P98095 1184 aa13.46□□□□□ -0.26
GTF2H2-201ENST00000274400 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
GTF2H2-201ENST00000274400 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
GTF2H2-201ENST00000274400 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
GTF2H2-201ENST00000274400 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
GTF2H2-201ENST00000274400 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
GTF2H2-201ENST00000274400 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
GTF2H2-201ENST00000274400 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
GTF2H2-201ENST00000274400 CUX2O14529 1486 aa13.33□□□□□ -0.28
GTF2H2-201ENST00000274400 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
GTF2H2-201ENST00000274400 MRC2Q9UBG0 1479 aa13.31□□□□□ -0.28
GTF2H2-201ENST00000274400 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.28
GTF2H2-201ENST00000274400 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
GTF2H2-201ENST00000274400 WIZO95785 1651 aa13.26□□□□□ -0.29
GTF2H2-201ENST00000274400 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
GTF2H2-201ENST00000274400 CFTRP13569 1480 aa13.24□□□□□ -0.29
GTF2H2-201ENST00000274400 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
GTF2H2-201ENST00000274400 NESP48681 1621 aa13.17□□□□□ -0.3
GTF2H2-201ENST00000274400 SOGA1O94964 1423 aa13.17□□□□□ -0.3
GTF2H2-201ENST00000274400 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
GTF2H2-201ENST00000274400 APLP2Q06481 763 aa13.14□□□□□ -0.31
GTF2H2-201ENST00000274400 UBTFP17480 764 aaKnown RBP13.13□□□□□ -0.31
GTF2H2-201ENST00000274400 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
GTF2H2-201ENST00000274400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
GTF2H2-201ENST00000274400 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
GTF2H2-201ENST00000274400 TTBK1Q5TCY1 1321 aaPredicted RBP13.02□□□□□ -0.32
GTF2H2-201ENST00000274400 ATP1B4Q9UN42 357 aaPredicted RBP13.01□□□□□ -0.33
GTF2H2-201ENST00000274400 TDRD9Q8NDG6 1382 aaKnown RBP13□□□□□ -0.33
GTF2H2-201ENST00000274400 TOPBP1Q92547 1522 aa12.97□□□□□ -0.33
GTF2H2-201ENST00000274400 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
GTF2H2-201ENST00000274400 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
GTF2H2-201ENST00000274400 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
GTF2H2-201ENST00000274400 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
GTF2H2-201ENST00000274400 EEA1Q15075 1411 aa12.94□□□□□ -0.34
GTF2H2-201ENST00000274400 RANGAP1P46060 587 aaPredicted RBP12.94□□□□□ -0.34
GTF2H2-201ENST00000274400 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
GTF2H2-201ENST00000274400 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
GTF2H2-201ENST00000274400 CARMIL2Q6F5E8 1435 aa12.92□□□□□ -0.34
GTF2H2-201ENST00000274400 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
GTF2H2-201ENST00000274400 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
GTF2H2-201ENST00000274400 EHMT2Q96KQ7 1210 aa12.91□□□□□ -0.34
GTF2H2-201ENST00000274400 WDR62O43379 1518 aa12.91□□□□□ -0.34
GTF2H2-201ENST00000274400 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
GTF2H2-201ENST00000274400 CARMIL1Q5VZK9 1371 aa12.86□□□□□ -0.35
GTF2H2-201ENST00000274400 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
GTF2H2-201ENST00000274400 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
GTF2H2-201ENST00000274400 POLA1P09884 1462 aaPredicted RBP12.84□□□□□ -0.35
GTF2H2-201ENST00000274400 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.35
GTF2H2-201ENST00000274400 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.35
GTF2H2-201ENST00000274400 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
GTF2H2-201ENST00000274400 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
GTF2H2-201ENST00000274400 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
GTF2H2-201ENST00000274400 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
GTF2H2-201ENST00000274400 KIF21AQ7Z4S6 1674 aa12.78□□□□□ -0.36
GTF2H2-201ENST00000274400 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
GTF2H2-201ENST00000274400 WDR97A6NE52 1622 aa12.75□□□□□ -0.37
GTF2H2-201ENST00000274400 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
GTF2H2-201ENST00000274400 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
GTF2H2-201ENST00000274400 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
GTF2H2-201ENST00000274400 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
GTF2H2-201ENST00000274400 THOC2Q8NI27 1593 aaKnown RBP12.72□□□□□ -0.37
GTF2H2-201ENST00000274400 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.38
GTF2H2-201ENST00000274400 CUX1P39880 1505 aa12.7□□□□□ -0.38
GTF2H2-201ENST00000274400 RAPGEF2Q9Y4G8 1499 aa12.69□□□□□ -0.38
GTF2H2-201ENST00000274400 PTPRGP23470 1445 aa12.68□□□□□ -0.38
GTF2H2-201ENST00000274400 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
GTF2H2-201ENST00000274400 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
GTF2H2-201ENST00000274400 P3H3Q8IVL6 736 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms