RNA–Protein interactions for RNA: ENST00000273853.10

CENPC-201, Transcript of centromere protein C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CENPC, Length 6,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-201ENST00000273853 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
CENPC-201ENST00000273853 NISCHQ9Y2I1 1504 aa17■□□□□ 0.31
CENPC-201ENST00000273853 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
CENPC-201ENST00000273853 SHROOM4Q9ULL8 1493 aa16.2■□□□□ 0.18
CENPC-201ENST00000273853 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
CENPC-201ENST00000273853 APLP2Q06481 763 aa15.89■□□□□ 0.13
CENPC-201ENST00000273853 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
CENPC-201ENST00000273853 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
CENPC-201ENST00000273853 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
CENPC-201ENST00000273853 MYT1Q01538 1121 aa15.57■□□□□ 0.08
CENPC-201ENST00000273853 ERICH6Q7L0X2 663 aa15.54■□□□□ 0.08
CENPC-201ENST00000273853 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
CENPC-201ENST00000273853 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
CENPC-201ENST00000273853 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
CENPC-201ENST00000273853 RANGAP1P46060 587 aaPredicted RBP15.22■□□□□ 0.03
CENPC-201ENST00000273853 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
CENPC-201ENST00000273853 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
CENPC-201ENST00000273853 YTHDC1Q96MU7 727 aaKnown RBP15.11■□□□□ 0.01
CENPC-201ENST00000273853 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
CENPC-201ENST00000273853 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
CENPC-201ENST00000273853 NEFLP07196 543 aa14.82□□□□□ -0.04
CENPC-201ENST00000273853 CNGB1Q14028 1251 aaPredicted RBP14.81□□□□□ -0.04
CENPC-201ENST00000273853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.78□□□□□ -0.04
CENPC-201ENST00000273853 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
CENPC-201ENST00000273853 TRIM26Q12899 539 aaPredicted RBP14.75□□□□□ -0.05
CENPC-201ENST00000273853 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
CENPC-201ENST00000273853 PPARGC1BQ86YN6 1023 aaKnown RBP14.69□□□□□ -0.06
CENPC-201ENST00000273853 ABCC9O60706 1549 aa14.66□□□□□ -0.06
CENPC-201ENST00000273853 POLR3GLQ9BT43 218 aa14.65□□□□□ -0.06
CENPC-201ENST00000273853 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
CENPC-201ENST00000273853 DAXXQ9UER7 740 aaPredicted RBP14.61□□□□□ -0.07
CENPC-201ENST00000273853 ITGAEP38570 1179 aa14.6□□□□□ -0.07
CENPC-201ENST00000273853 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
CENPC-201ENST00000273853 LOC105371045A0A1W2PR82 267 aa14.45□□□□□ -0.1
CENPC-201ENST00000273853 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
CENPC-201ENST00000273853 BCL11AQ9H165 835 aa14.39□□□□□ -0.11
CENPC-201ENST00000273853 HRCP23327 699 aa14.39□□□□□ -0.11
CENPC-201ENST00000273853 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
CENPC-201ENST00000273853 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
CENPC-201ENST00000273853 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
CENPC-201ENST00000273853 CLSPNQ9HAW4 1339 aa14.25□□□□□ -0.13
CENPC-201ENST00000273853 FBLN2P98095 1184 aa14.23□□□□□ -0.13
CENPC-201ENST00000273853 BCANQ96GW7 911 aa14.18□□□□□ -0.14
CENPC-201ENST00000273853 RTL5Q5HYW3 569 aaPredicted RBP14.16□□□□□ -0.14
CENPC-201ENST00000273853 CDK11AQ9UQ88 783 aaPredicted RBP14.13□□□□□ -0.15
CENPC-201ENST00000273853 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
CENPC-201ENST00000273853 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
CENPC-201ENST00000273853 SCRIBQ14160 1630 aa14.11□□□□□ -0.15
CENPC-201ENST00000273853 NEUROD1Q13562 356 aa14.09□□□□□ -0.15
CENPC-201ENST00000273853 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
CENPC-201ENST00000273853 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
CENPC-201ENST00000273853 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
CENPC-201ENST00000273853 ZNF326Q5BKZ1 582 aaKnown RBP14.04□□□□□ -0.16
CENPC-201ENST00000273853 ANP32CO43423 234 aa14.04□□□□□ -0.16
CENPC-201ENST00000273853 NEFMP07197 916 aa13.98□□□□□ -0.17
CENPC-201ENST00000273853 P3H3Q8IVL6 736 aa13.98□□□□□ -0.17
CENPC-201ENST00000273853 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
CENPC-201ENST00000273853 EIF5BO60841 1220 aaKnown RBP13.96□□□□□ -0.17
CENPC-201ENST00000273853 ESF1Q9H501 851 aaKnown RBP13.94□□□□□ -0.18
CENPC-201ENST00000273853 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
CENPC-201ENST00000273853 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
CENPC-201ENST00000273853 ARID3CA6NKF2 412 aa13.9□□□□□ -0.18
CENPC-201ENST00000273853 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
CENPC-201ENST00000273853 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
CENPC-201ENST00000273853 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
CENPC-201ENST00000273853 ARXQ96QS3 562 aa13.82□□□□□ -0.2
CENPC-201ENST00000273853 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
CENPC-201ENST00000273853 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
CENPC-201ENST00000273853 NACADO15069 1562 aa13.74□□□□□ -0.21
CENPC-201ENST00000273853 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
CENPC-201ENST00000273853 TSPY4P0CV99 314 aa13.72□□□□□ -0.21
CENPC-201ENST00000273853 TSPY10P0CW01 314 aa13.72□□□□□ -0.21
CENPC-201ENST00000273853 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
CENPC-201ENST00000273853 EEA1Q15075 1411 aa13.72□□□□□ -0.21
CENPC-201ENST00000273853 DCAF1Q9Y4B6 1507 aa13.71□□□□□ -0.21
CENPC-201ENST00000273853 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
CENPC-201ENST00000273853 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.22
CENPC-201ENST00000273853 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.22
CENPC-201ENST00000273853 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
CENPC-201ENST00000273853 CLIP1P30622 1438 aa13.64□□□□□ -0.23
CENPC-201ENST00000273853 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
CENPC-201ENST00000273853 BAZ1BQ9UIG0 1483 aaKnown RBP13.62□□□□□ -0.23
CENPC-201ENST00000273853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.239e-7■□□□□ 10.4
CENPC-201ENST00000273853 NBR1Q14596 966 aa13.59□□□□□ -0.23
CENPC-201ENST00000273853 CHIC2Q9UKJ5 165 aa13.59□□□□□ -0.23
CENPC-201ENST00000273853 GOLGA3Q08378 1498 aa13.59□□□□□ -0.23
CENPC-201ENST00000273853 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
CENPC-201ENST00000273853 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
CENPC-201ENST00000273853 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
CENPC-201ENST00000273853 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
CENPC-201ENST00000273853 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
CENPC-201ENST00000273853 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.24
CENPC-201ENST00000273853 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
CENPC-201ENST00000273853 WDR43Q15061 677 aaKnown RBP eCLIP13.51□□□□□ -0.25
CENPC-201ENST00000273853 UPF2Q9HAU5 1272 aaKnown RBP13.5□□□□□ -0.25
CENPC-201ENST00000273853 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
CENPC-201ENST00000273853 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
CENPC-201ENST00000273853 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
CENPC-201ENST00000273853 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
CENPC-201ENST00000273853 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms