RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.17
PRUNE1-201ENST00000271620 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
PRUNE1-201ENST00000271620 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
PRUNE1-201ENST00000271620 DCAF8L2P0C7V8 631 aa19.05■□□□□ 0.64
PRUNE1-201ENST00000271620 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
PRUNE1-201ENST00000271620 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
PRUNE1-201ENST00000271620 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
PRUNE1-201ENST00000271620 MYO15BQ96JP2 1530 aa18.25■□□□□ 0.51
PRUNE1-201ENST00000271620 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
PRUNE1-201ENST00000271620 SCRIBQ14160 1630 aa17.97■□□□□ 0.47
PRUNE1-201ENST00000271620 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
PRUNE1-201ENST00000271620 ABCC9O60706 1549 aa17.9■□□□□ 0.46
PRUNE1-201ENST00000271620 PCGF6Q9BYE7 350 aa17.87■□□□□ 0.45
PRUNE1-201ENST00000271620 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
PRUNE1-201ENST00000271620 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
PRUNE1-201ENST00000271620 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
PRUNE1-201ENST00000271620 HRCP23327 699 aa17.66■□□□□ 0.42
PRUNE1-201ENST00000271620 TRIM41Q8WV44 630 aa17.64■□□□□ 0.41
PRUNE1-201ENST00000271620 CECR2Q9BXF3 1484 aa17.62■□□□□ 0.41
PRUNE1-201ENST00000271620 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
PRUNE1-201ENST00000271620 NACADO15069 1562 aa17.53■□□□□ 0.4
PRUNE1-201ENST00000271620 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
PRUNE1-201ENST00000271620 MROH2BQ7Z745 1585 aa17.49■□□□□ 0.39
PRUNE1-201ENST00000271620 WIZO95785 1651 aa17.39■□□□□ 0.37
PRUNE1-201ENST00000271620 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
PRUNE1-201ENST00000271620 PABPN1Q86U42 306 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRUNE1-201ENST00000271620 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
PRUNE1-201ENST00000271620 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
PRUNE1-201ENST00000271620 TTBK1Q5TCY1 1321 aaPredicted RBP17.05■□□□□ 0.32
PRUNE1-201ENST00000271620 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
PRUNE1-201ENST00000271620 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
PRUNE1-201ENST00000271620 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
PRUNE1-201ENST00000271620 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
PRUNE1-201ENST00000271620 EIF4G1Q04637 1599 aaKnown RBP16.97■□□□□ 0.31
PRUNE1-201ENST00000271620 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
PRUNE1-201ENST00000271620 SOGA1O94964 1423 aa16.93■□□□□ 0.3
PRUNE1-201ENST00000271620 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
PRUNE1-201ENST00000271620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
PRUNE1-201ENST00000271620 UBTFP17480 764 aaKnown RBP16.86■□□□□ 0.29
PRUNE1-201ENST00000271620 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
PRUNE1-201ENST00000271620 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
PRUNE1-201ENST00000271620 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
PRUNE1-201ENST00000271620 CEP162Q5TB80 1403 aa16.76■□□□□ 0.27
PRUNE1-201ENST00000271620 CCER1Q8TC90 406 aaPredicted RBP16.75■□□□□ 0.27
PRUNE1-201ENST00000271620 RANGAP1P46060 587 aaPredicted RBP16.74■□□□□ 0.27
PRUNE1-201ENST00000271620 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
PRUNE1-201ENST00000271620 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
PRUNE1-201ENST00000271620 TNIKQ9UKE5 1360 aa16.66■□□□□ 0.26
PRUNE1-201ENST00000271620 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
PRUNE1-201ENST00000271620 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
PRUNE1-201ENST00000271620 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
PRUNE1-201ENST00000271620 EEA1Q15075 1411 aa16.58■□□□□ 0.24
PRUNE1-201ENST00000271620 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
PRUNE1-201ENST00000271620 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
PRUNE1-201ENST00000271620 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
PRUNE1-201ENST00000271620 RAPGEF2Q9Y4G8 1499 aa16.47■□□□□ 0.23
PRUNE1-201ENST00000271620 CLIP1P30622 1438 aa16.46■□□□□ 0.23
PRUNE1-201ENST00000271620 APLP2Q06481 763 aa16.41■□□□□ 0.22
PRUNE1-201ENST00000271620 KIF21BO75037 1637 aa16.35■□□□□ 0.21
PRUNE1-201ENST00000271620 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
PRUNE1-201ENST00000271620 VPS8Q8N3P4 1428 aa16.32■□□□□ 0.2
PRUNE1-201ENST00000271620 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
PRUNE1-201ENST00000271620 TOP2BQ02880 1626 aa16.32■□□□□ 0.2
PRUNE1-201ENST00000271620 NCAPD3P42695 1498 aa16.3■□□□□ 0.2
PRUNE1-201ENST00000271620 CUX1P39880 1505 aa16.26■□□□□ 0.19
PRUNE1-201ENST00000271620 KANK4Q5T7N3 995 aaPredicted RBP16.24■□□□□ 0.19
PRUNE1-201ENST00000271620 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
PRUNE1-201ENST00000271620 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
PRUNE1-201ENST00000271620 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
PRUNE1-201ENST00000271620 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
PRUNE1-201ENST00000271620 CFTRP13569 1480 aa16.19■□□□□ 0.18
PRUNE1-201ENST00000271620 KIF27Q86VH2 1401 aa16.18■□□□□ 0.18
PRUNE1-201ENST00000271620 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
PRUNE1-201ENST00000271620 ITGAEP38570 1179 aa16.16■□□□□ 0.18
PRUNE1-201ENST00000271620 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
PRUNE1-201ENST00000271620 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.17
PRUNE1-201ENST00000271620 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
PRUNE1-201ENST00000271620 CUX2O14529 1486 aa16.1■□□□□ 0.17
PRUNE1-201ENST00000271620 ERICH3Q5RHP9 1530 aa16.1■□□□□ 0.17
PRUNE1-201ENST00000271620 P3H3Q8IVL6 736 aa16.08■□□□□ 0.17
PRUNE1-201ENST00000271620 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
PRUNE1-201ENST00000271620 IGF1RP08069 1367 aa16.06■□□□□ 0.16
PRUNE1-201ENST00000271620 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
PRUNE1-201ENST00000271620 MIER1Q8N108 512 aa16.04■□□□□ 0.16
PRUNE1-201ENST00000271620 ARHGAP35Q9NRY4 1499 aa16.04■□□□□ 0.16
PRUNE1-201ENST00000271620 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
PRUNE1-201ENST00000271620 CENPBP07199 599 aaPredicted RBP16.01■□□□□ 0.15
PRUNE1-201ENST00000271620 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
PRUNE1-201ENST00000271620 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
PRUNE1-201ENST00000271620 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
PRUNE1-201ENST00000271620 DHX57Q6P158 1386 aaKnown RBP15.98■□□□□ 0.15
PRUNE1-201ENST00000271620 NESP48681 1621 aa15.94■□□□□ 0.14
PRUNE1-201ENST00000271620 RAD54L2Q9Y4B4 1467 aa15.94■□□□□ 0.14
PRUNE1-201ENST00000271620 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
PRUNE1-201ENST00000271620 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
PRUNE1-201ENST00000271620 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
PRUNE1-201ENST00000271620 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
PRUNE1-201ENST00000271620 RRBP1Q9P2E9 1410 aaKnown RBP15.89■□□□□ 0.13
PRUNE1-201ENST00000271620 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
PRUNE1-201ENST00000271620 FHOD3Q2V2M9 1422 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms