RNA–Protein interactions for RNA: ENST00000270815.4

C1orf216-201, Transcript of chromosome 1 open reading frame 216, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf216, Length 3,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf216-201ENST00000270815 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
C1orf216-201ENST00000270815 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
C1orf216-201ENST00000270815 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
C1orf216-201ENST00000270815 SUPT5HO00267 1087 aaKnown RBP21.85■■□□□ 1.09
C1orf216-201ENST00000270815 CCDC180Q9P1Z9 1646 aa21.68■■□□□ 1.06
C1orf216-201ENST00000270815 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
C1orf216-201ENST00000270815 HRCP23327 699 aa21.22■□□□□ 0.99
C1orf216-201ENST00000270815 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
C1orf216-201ENST00000270815 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
C1orf216-201ENST00000270815 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
C1orf216-201ENST00000270815 PPARGC1BQ86YN6 1023 aaKnown RBP20.97■□□□□ 0.95
C1orf216-201ENST00000270815 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
C1orf216-201ENST00000270815 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
C1orf216-201ENST00000270815 ABCC9O60706 1549 aa20.63■□□□□ 0.89
C1orf216-201ENST00000270815 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
C1orf216-201ENST00000270815 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
C1orf216-201ENST00000270815 TRIM26Q12899 539 aaPredicted RBP20.35■□□□□ 0.85
C1orf216-201ENST00000270815 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
C1orf216-201ENST00000270815 TRIM41Q8WV44 630 aa20.27■□□□□ 0.83
C1orf216-201ENST00000270815 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
C1orf216-201ENST00000270815 NACADO15069 1562 aa20.2■□□□□ 0.82
C1orf216-201ENST00000270815 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
C1orf216-201ENST00000270815 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
C1orf216-201ENST00000270815 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
C1orf216-201ENST00000270815 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
C1orf216-201ENST00000270815 PELP1Q8IZL8 1130 aaKnown RBP19.97■□□□□ 0.79
C1orf216-201ENST00000270815 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
C1orf216-201ENST00000270815 WIZO95785 1651 aa19.9■□□□□ 0.78
C1orf216-201ENST00000270815 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
C1orf216-201ENST00000270815 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
C1orf216-201ENST00000270815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
C1orf216-201ENST00000270815 CCER1Q8TC90 406 aaPredicted RBP19.61■□□□□ 0.73
C1orf216-201ENST00000270815 NEUROD1Q13562 356 aa19.57■□□□□ 0.72
C1orf216-201ENST00000270815 SMARCA4P51532 1647 aa19.55■□□□□ 0.72
C1orf216-201ENST00000270815 CCDC88BA6NC98 1476 aa19.55■□□□□ 0.72
C1orf216-201ENST00000270815 ACIN1Q9UKV3 1341 aaKnown RBP19.55■□□□□ 0.72
C1orf216-201ENST00000270815 TTBK1Q5TCY1 1321 aaPredicted RBP19.54■□□□□ 0.72
C1orf216-201ENST00000270815 ABCC8Q09428 1581 aa19.52■□□□□ 0.71
C1orf216-201ENST00000270815 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
C1orf216-201ENST00000270815 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
C1orf216-201ENST00000270815 GTF3C3Q9Y5Q9 886 aa19.47■□□□□ 0.71
C1orf216-201ENST00000270815 DIEXFQ68CQ4 756 aaKnown RBP19.44■□□□□ 0.7
C1orf216-201ENST00000270815 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
C1orf216-201ENST00000270815 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
C1orf216-201ENST00000270815 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
C1orf216-201ENST00000270815 SOGA1O94964 1423 aa19.36■□□□□ 0.69
C1orf216-201ENST00000270815 EIF4G1Q04637 1599 aaKnown RBP19.36■□□□□ 0.69
C1orf216-201ENST00000270815 BICRAQ9NZM4 1560 aa19.35■□□□□ 0.69
C1orf216-201ENST00000270815 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
C1orf216-201ENST00000270815 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
C1orf216-201ENST00000270815 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
C1orf216-201ENST00000270815 RANGAP1P46060 587 aaPredicted RBP19.24■□□□□ 0.67
C1orf216-201ENST00000270815 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
C1orf216-201ENST00000270815 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
C1orf216-201ENST00000270815 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
C1orf216-201ENST00000270815 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
C1orf216-201ENST00000270815 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
C1orf216-201ENST00000270815 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
C1orf216-201ENST00000270815 EEA1Q15075 1411 aa19.07■□□□□ 0.64
C1orf216-201ENST00000270815 MYT1Q01538 1121 aa19.06■□□□□ 0.64
C1orf216-201ENST00000270815 PEG3Q9GZU2 1588 aa19.03■□□□□ 0.64
C1orf216-201ENST00000270815 GOLGA3Q08378 1498 aa19.03■□□□□ 0.64
C1orf216-201ENST00000270815 SYNJ1O43426 1573 aa19■□□□□ 0.63
C1orf216-201ENST00000270815 MIER1Q8N108 512 aa18.97■□□□□ 0.63
C1orf216-201ENST00000270815 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
C1orf216-201ENST00000270815 APLP2Q06481 763 aa18.95■□□□□ 0.62
C1orf216-201ENST00000270815 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
C1orf216-201ENST00000270815 CLIP1P30622 1438 aa18.89■□□□□ 0.61
C1orf216-201ENST00000270815 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
C1orf216-201ENST00000270815 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
C1orf216-201ENST00000270815 KIF21BO75037 1637 aa18.74■□□□□ 0.59
C1orf216-201ENST00000270815 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
C1orf216-201ENST00000270815 TOP2BQ02880 1626 aa18.71■□□□□ 0.59
C1orf216-201ENST00000270815 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
C1orf216-201ENST00000270815 CUX1P39880 1505 aa18.63■□□□□ 0.57
C1orf216-201ENST00000270815 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
C1orf216-201ENST00000270815 CFTRP13569 1480 aa18.59■□□□□ 0.57
C1orf216-201ENST00000270815 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
C1orf216-201ENST00000270815 ITGAEP38570 1179 aa18.57■□□□□ 0.56
C1orf216-201ENST00000270815 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
C1orf216-201ENST00000270815 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
C1orf216-201ENST00000270815 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
C1orf216-201ENST00000270815 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
C1orf216-201ENST00000270815 CUX2O14529 1486 aa18.51■□□□□ 0.55
C1orf216-201ENST00000270815 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
C1orf216-201ENST00000270815 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
C1orf216-201ENST00000270815 ARAP1Q96P48 1450 aa18.47■□□□□ 0.55
C1orf216-201ENST00000270815 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
C1orf216-201ENST00000270815 IGF1RP08069 1367 aa18.42■□□□□ 0.54
C1orf216-201ENST00000270815 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
C1orf216-201ENST00000270815 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.53
C1orf216-201ENST00000270815 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
C1orf216-201ENST00000270815 BCANQ96GW7 911 aa18.37■□□□□ 0.53
C1orf216-201ENST00000270815 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
C1orf216-201ENST00000270815 TSHZ2Q9NRE2 1034 aa18.36■□□□□ 0.53
C1orf216-201ENST00000270815 DHX57Q6P158 1386 aaKnown RBP18.33■□□□□ 0.53
C1orf216-201ENST00000270815 KCNH8Q96L42 1107 aa18.33■□□□□ 0.52
C1orf216-201ENST00000270815 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
C1orf216-201ENST00000270815 CLSPNQ9HAW4 1339 aa18.32■□□□□ 0.52
C1orf216-201ENST00000270815 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms