RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
PTPN23-201ENST00000265562 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
PTPN23-201ENST00000265562 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.21
PTPN23-201ENST00000265562 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
PTPN23-201ENST00000265562 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.14
PTPN23-201ENST00000265562 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
PTPN23-201ENST00000265562 PCGF6Q9BYE7 350 aa21.88■■□□□ 1.09
PTPN23-201ENST00000265562 CENPBP07199 599 aaPredicted RBP21.71■■□□□ 1.07
PTPN23-201ENST00000265562 MYT1Q01538 1121 aa21.64■■□□□ 1.05
PTPN23-201ENST00000265562 ZEB1P37275 1124 aaPredicted RBP21.62■■□□□ 1.05
PTPN23-201ENST00000265562 APLP2Q06481 763 aa21.6■■□□□ 1.05
PTPN23-201ENST00000265562 ERICH6Q7L0X2 663 aa21.47■■□□□ 1.03
PTPN23-201ENST00000265562 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
PTPN23-201ENST00000265562 CCER1Q8TC90 406 aaPredicted RBP21.36■■□□□ 1.01
PTPN23-201ENST00000265562 TTBK1Q5TCY1 1321 aaPredicted RBP21.34■■□□□ 1.01
PTPN23-201ENST00000265562 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.96
PTPN23-201ENST00000265562 HRCP23327 699 aa21.06■□□□□ 0.96
PTPN23-201ENST00000265562 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
PTPN23-201ENST00000265562 NEFLP07196 543 aa21.03■□□□□ 0.96
PTPN23-201ENST00000265562 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
PTPN23-201ENST00000265562 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.92
PTPN23-201ENST00000265562 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
PTPN23-201ENST00000265562 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
PTPN23-201ENST00000265562 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.88
PTPN23-201ENST00000265562 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
PTPN23-201ENST00000265562 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
PTPN23-201ENST00000265562 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
PTPN23-201ENST00000265562 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
PTPN23-201ENST00000265562 HNRNPUL2Q1KMD3 747 aaKnown RBP20.2■□□□□ 0.82
PTPN23-201ENST00000265562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
PTPN23-201ENST00000265562 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
PTPN23-201ENST00000265562 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
PTPN23-201ENST00000265562 ITGAEP38570 1179 aa20.15■□□□□ 0.82
PTPN23-201ENST00000265562 POLR3GLQ9BT43 218 aa20.05■□□□□ 0.8
PTPN23-201ENST00000265562 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
PTPN23-201ENST00000265562 ACIN1Q9UKV3 1341 aaKnown RBP19.9■□□□□ 0.78
PTPN23-201ENST00000265562 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
PTPN23-201ENST00000265562 BCANQ96GW7 911 aa19.89■□□□□ 0.77
PTPN23-201ENST00000265562 CDK11AQ9UQ88 783 aaPredicted RBP19.79■□□□□ 0.76
PTPN23-201ENST00000265562 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
PTPN23-201ENST00000265562 ANP32CO43423 234 aa19.67■□□□□ 0.74
PTPN23-201ENST00000265562 NEUROD1Q13562 356 aa19.61■□□□□ 0.73
PTPN23-201ENST00000265562 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
PTPN23-201ENST00000265562 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
PTPN23-201ENST00000265562 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
PTPN23-201ENST00000265562 TRIM52Q96A61 297 aa19.47■□□□□ 0.71
PTPN23-201ENST00000265562 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
PTPN23-201ENST00000265562 SCAF1Q9H7N4 1312 aaKnown RBP19.37■□□□□ 0.69
PTPN23-201ENST00000265562 FKBP8Q14318 412 aa19.36■□□□□ 0.69
PTPN23-201ENST00000265562 ABCC9O60706 1549 aa19.33■□□□□ 0.69
PTPN23-201ENST00000265562 EIF5BO60841 1220 aaKnown RBP19.31■□□□□ 0.68
PTPN23-201ENST00000265562 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
PTPN23-201ENST00000265562 ZNF326Q5BKZ1 582 aaKnown RBP19.27■□□□□ 0.68
PTPN23-201ENST00000265562 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
PTPN23-201ENST00000265562 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
PTPN23-201ENST00000265562 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
PTPN23-201ENST00000265562 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
PTPN23-201ENST00000265562 GLIPR1L2Q4G1C9 344 aa19.12■□□□□ 0.65
PTPN23-201ENST00000265562 HNRNPUQ00839 825 aaKnown RBP eCLIP19.11■□□□□ 0.65
PTPN23-201ENST00000265562 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
PTPN23-201ENST00000265562 NBR1Q14596 966 aa19.07■□□□□ 0.64
PTPN23-201ENST00000265562 DDX10Q13206 875 aaKnown RBP19.06■□□□□ 0.64
PTPN23-201ENST00000265562 ANP32BQ92688 251 aaKnown RBP19.05■□□□□ 0.64
PTPN23-201ENST00000265562 MIER1Q8N108 512 aa19.03■□□□□ 0.64
PTPN23-201ENST00000265562 BCL11AQ9H165 835 aa18.99■□□□□ 0.63
PTPN23-201ENST00000265562 TONSLQ96HA7 1378 aa18.98■□□□□ 0.63
PTPN23-201ENST00000265562 FAM9BQ8IZU0 186 aa18.97■□□□□ 0.63
PTPN23-201ENST00000265562 CCDC136Q96JN2 1154 aa18.97■□□□□ 0.63
PTPN23-201ENST00000265562 ANP32EQ9BTT0 268 aa18.95■□□□□ 0.62
PTPN23-201ENST00000265562 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
PTPN23-201ENST00000265562 HSP90AA1P07900 732 aaKnown RBP18.9■□□□□ 0.62
PTPN23-201ENST00000265562 NEFMP07197 916 aa18.9■□□□□ 0.62
PTPN23-201ENST00000265562 P3H3Q8IVL6 736 aa18.88■□□□□ 0.61
PTPN23-201ENST00000265562 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
PTPN23-201ENST00000265562 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
PTPN23-201ENST00000265562 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
PTPN23-201ENST00000265562 SALL2Q9Y467 1007 aaPredicted RBP18.77■□□□□ 0.6
PTPN23-201ENST00000265562 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
PTPN23-201ENST00000265562 ARXQ96QS3 562 aa18.76■□□□□ 0.59
PTPN23-201ENST00000265562 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
PTPN23-201ENST00000265562 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
PTPN23-201ENST00000265562 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
PTPN23-201ENST00000265562 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
PTPN23-201ENST00000265562 DDRGK1Q96HY6 314 aa18.69■□□□□ 0.58
PTPN23-201ENST00000265562 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
PTPN23-201ENST00000265562 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
PTPN23-201ENST00000265562 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
PTPN23-201ENST00000265562 HIRIP3Q9BW71 556 aaPredicted RBP18.63■□□□□ 0.57
PTPN23-201ENST00000265562 FBLN2P98095 1184 aa18.59■□□□□ 0.57
PTPN23-201ENST00000265562 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPN23-201ENST00000265562 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.57
PTPN23-201ENST00000265562 BECN1Q14457 450 aa18.58■□□□□ 0.56
PTPN23-201ENST00000265562 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
PTPN23-201ENST00000265562 TRIM44Q96DX7 344 aaPredicted RBP18.56■□□□□ 0.56
PTPN23-201ENST00000265562 EIF4G2P78344 907 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTPN23-201ENST00000265562 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
PTPN23-201ENST00000265562 ERICH6BQ5W0A0 696 aa18.52■□□□□ 0.56
PTPN23-201ENST00000265562 NOP58Q9Y2X3 529 aaKnown RBP18.5■□□□□ 0.55
PTPN23-201ENST00000265562 PPP4R2Q9NY27 417 aa18.49■□□□□ 0.55
PTPN23-201ENST00000265562 CLIP1P30622 1438 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms