RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
TUBGCP3-201ENST00000261965 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
TUBGCP3-201ENST00000261965 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
TUBGCP3-201ENST00000261965 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
TUBGCP3-201ENST00000261965 PCGF6Q9BYE7 350 aa23.25■■□□□ 1.31
TUBGCP3-201ENST00000261965 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
TUBGCP3-201ENST00000261965 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.29
TUBGCP3-201ENST00000261965 PPARGC1BQ86YN6 1023 aaKnown RBP22.88■■□□□ 1.25
TUBGCP3-201ENST00000261965 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
TUBGCP3-201ENST00000261965 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
TUBGCP3-201ENST00000261965 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
TUBGCP3-201ENST00000261965 HRCP23327 699 aa22.78■■□□□ 1.24
TUBGCP3-201ENST00000261965 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
TUBGCP3-201ENST00000261965 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
TUBGCP3-201ENST00000261965 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
TUBGCP3-201ENST00000261965 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
TUBGCP3-201ENST00000261965 TRIM26Q12899 539 aaPredicted RBP22.14■■□□□ 1.13
TUBGCP3-201ENST00000261965 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
TUBGCP3-201ENST00000261965 SCRIBQ14160 1630 aa21.87■■□□□ 1.09
TUBGCP3-201ENST00000261965 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
TUBGCP3-201ENST00000261965 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.07
TUBGCP3-201ENST00000261965 RSF1Q96T23 1441 aaPredicted RBP21.75■■□□□ 1.07
TUBGCP3-201ENST00000261965 ABCC9O60706 1549 aa21.73■■□□□ 1.07
TUBGCP3-201ENST00000261965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.66■■□□□ 1.06
TUBGCP3-201ENST00000261965 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
TUBGCP3-201ENST00000261965 RANGAP1P46060 587 aaPredicted RBP21.6■■□□□ 1.05
TUBGCP3-201ENST00000261965 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
TUBGCP3-201ENST00000261965 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
TUBGCP3-201ENST00000261965 PELP1Q8IZL8 1130 aaKnown RBP21.47■■□□□ 1.03
TUBGCP3-201ENST00000261965 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
TUBGCP3-201ENST00000261965 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
TUBGCP3-201ENST00000261965 SCAF1Q9H7N4 1312 aaKnown RBP21.36■■□□□ 1.01
TUBGCP3-201ENST00000261965 GTF3C3Q9Y5Q9 886 aa21.3■■□□□ 1
TUBGCP3-201ENST00000261965 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
TUBGCP3-201ENST00000261965 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
TUBGCP3-201ENST00000261965 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
TUBGCP3-201ENST00000261965 HNRNPUL2Q1KMD3 747 aaKnown RBP21.14■□□□□ 0.97
TUBGCP3-201ENST00000261965 WIZO95785 1651 aa21.13■□□□□ 0.97
TUBGCP3-201ENST00000261965 NEUROD1Q13562 356 aa21.11■□□□□ 0.97
TUBGCP3-201ENST00000261965 ACIN1Q9UKV3 1341 aaKnown RBP21.01■□□□□ 0.95
TUBGCP3-201ENST00000261965 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
TUBGCP3-201ENST00000261965 APLP2Q06481 763 aa21.01■□□□□ 0.95
TUBGCP3-201ENST00000261965 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
TUBGCP3-201ENST00000261965 CCDC88BA6NC98 1476 aa20.95■□□□□ 0.94
TUBGCP3-201ENST00000261965 SOGA1O94964 1423 aa20.95■□□□□ 0.94
TUBGCP3-201ENST00000261965 NACADO15069 1562 aa20.92■□□□□ 0.94
TUBGCP3-201ENST00000261965 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
TUBGCP3-201ENST00000261965 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.92
TUBGCP3-201ENST00000261965 ITGAEP38570 1179 aa20.82■□□□□ 0.92
TUBGCP3-201ENST00000261965 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
TUBGCP3-201ENST00000261965 ZNF316A6NFI3 1004 aaPredicted RBP20.74■□□□□ 0.91
TUBGCP3-201ENST00000261965 BCANQ96GW7 911 aa20.71■□□□□ 0.91
TUBGCP3-201ENST00000261965 MIER1Q8N108 512 aa20.65■□□□□ 0.9
TUBGCP3-201ENST00000261965 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.89
TUBGCP3-201ENST00000261965 ATP1B4Q9UN42 357 aaPredicted RBP20.63■□□□□ 0.89
TUBGCP3-201ENST00000261965 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
TUBGCP3-201ENST00000261965 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
TUBGCP3-201ENST00000261965 SMARCA2P51531 1590 aa20.52■□□□□ 0.87
TUBGCP3-201ENST00000261965 CLIP1P30622 1438 aa20.5■□□□□ 0.87
TUBGCP3-201ENST00000261965 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
TUBGCP3-201ENST00000261965 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
TUBGCP3-201ENST00000261965 MYT1Q01538 1121 aa20.49■□□□□ 0.87
TUBGCP3-201ENST00000261965 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
TUBGCP3-201ENST00000261965 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
TUBGCP3-201ENST00000261965 EEA1Q15075 1411 aa20.37■□□□□ 0.85
TUBGCP3-201ENST00000261965 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
TUBGCP3-201ENST00000261965 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
TUBGCP3-201ENST00000261965 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
TUBGCP3-201ENST00000261965 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
TUBGCP3-201ENST00000261965 NEFLP07196 543 aa20.3■□□□□ 0.84
TUBGCP3-201ENST00000261965 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
TUBGCP3-201ENST00000261965 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
TUBGCP3-201ENST00000261965 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
TUBGCP3-201ENST00000261965 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
TUBGCP3-201ENST00000261965 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
TUBGCP3-201ENST00000261965 HIRIP3Q9BW71 556 aaPredicted RBP20.17■□□□□ 0.82
TUBGCP3-201ENST00000261965 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
TUBGCP3-201ENST00000261965 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
TUBGCP3-201ENST00000261965 KCNH8Q96L42 1107 aa20.07■□□□□ 0.8
TUBGCP3-201ENST00000261965 FKBP8Q14318 412 aa20.07■□□□□ 0.8
TUBGCP3-201ENST00000261965 TRIM52Q96A61 297 aa20.04■□□□□ 0.8
TUBGCP3-201ENST00000261965 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
TUBGCP3-201ENST00000261965 BICRAQ9NZM4 1560 aa20.03■□□□□ 0.8
TUBGCP3-201ENST00000261965 KIF21BO75037 1637 aa20.03■□□□□ 0.8
TUBGCP3-201ENST00000261965 DDX10Q13206 875 aaKnown RBP20.02■□□□□ 0.8
TUBGCP3-201ENST00000261965 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
TUBGCP3-201ENST00000261965 SIN3AQ96ST3 1273 aa20.02■□□□□ 0.8
TUBGCP3-201ENST00000261965 IRX6P78412 446 aaPredicted RBP19.97■□□□□ 0.79
TUBGCP3-201ENST00000261965 SUPT16HQ9Y5B9 1047 aaKnown RBP19.93■□□□□ 0.78
TUBGCP3-201ENST00000261965 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
TUBGCP3-201ENST00000261965 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.78
TUBGCP3-201ENST00000261965 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
TUBGCP3-201ENST00000261965 SENP3-EIF4A1A0A087X0R7 540 aa19.88■□□□□ 0.77
TUBGCP3-201ENST00000261965 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
TUBGCP3-201ENST00000261965 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
TUBGCP3-201ENST00000261965 CUX2O14529 1486 aa19.8■□□□□ 0.76
TUBGCP3-201ENST00000261965 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
TUBGCP3-201ENST00000261965 PRXQ9BXM0 1461 aa19.75■□□□□ 0.75
TUBGCP3-201ENST00000261965 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
TUBGCP3-201ENST00000261965 ANP32CO43423 234 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms