RNA–Protein interactions for RNA: ENST00000261503.9

SPECC1-201, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPECC1, Length 3,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-201ENST00000261503 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
SPECC1-201ENST00000261503 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
SPECC1-201ENST00000261503 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
SPECC1-201ENST00000261503 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
SPECC1-201ENST00000261503 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
SPECC1-201ENST00000261503 FAM9AQ8IZU1 332 aaPredicted RBP16.57■□□□□ 0.24
SPECC1-201ENST00000261503 ABCC9O60706 1549 aa16.34■□□□□ 0.21
SPECC1-201ENST00000261503 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
SPECC1-201ENST00000261503 TRIM41Q8WV44 630 aa16.27■□□□□ 0.19
SPECC1-201ENST00000261503 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
SPECC1-201ENST00000261503 LOC105371045A0A1W2PR82 267 aa16.2■□□□□ 0.18
SPECC1-201ENST00000261503 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
SPECC1-201ENST00000261503 ZCCHC6Q5VYS8 1495 aaKnown RBP16.12■□□□□ 0.17
SPECC1-201ENST00000261503 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPECC1-201ENST00000261503 RANGAP1P46060 587 aaPredicted RBP16.04■□□□□ 0.16
SPECC1-201ENST00000261503 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
SPECC1-201ENST00000261503 CCDC180Q9P1Z9 1646 aa15.94■□□□□ 0.14
SPECC1-201ENST00000261503 UBTFP17480 764 aaKnown RBP15.84■□□□□ 0.13
SPECC1-201ENST00000261503 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
SPECC1-201ENST00000261503 APLP2Q06481 763 aa15.72■□□□□ 0.11
SPECC1-201ENST00000261503 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
SPECC1-201ENST00000261503 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
SPECC1-201ENST00000261503 CCER1Q8TC90 406 aaPredicted RBP15.55■□□□□ 0.08
SPECC1-201ENST00000261503 HRCP23327 699 aa15.52■□□□□ 0.08
SPECC1-201ENST00000261503 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
SPECC1-201ENST00000261503 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
SPECC1-201ENST00000261503 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
SPECC1-201ENST00000261503 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
SPECC1-201ENST00000261503 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
SPECC1-201ENST00000261503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
SPECC1-201ENST00000261503 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
SPECC1-201ENST00000261503 ITGAEP38570 1179 aa15.3■□□□□ 0.04
SPECC1-201ENST00000261503 NACADO15069 1562 aa15.27■□□□□ 0.03
SPECC1-201ENST00000261503 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
SPECC1-201ENST00000261503 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
SPECC1-201ENST00000261503 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
SPECC1-201ENST00000261503 P3H3Q8IVL6 736 aa15.07■□□□□ 0
SPECC1-201ENST00000261503 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
SPECC1-201ENST00000261503 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
SPECC1-201ENST00000261503 WIZO95785 1651 aa14.96□□□□□ -0.01
SPECC1-201ENST00000261503 FAM50AQ14320 339 aaKnown RBP14.92□□□□□ -0.02
SPECC1-201ENST00000261503 ARID3CA6NKF2 412 aa14.91□□□□□ -0.02
SPECC1-201ENST00000261503 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
SPECC1-201ENST00000261503 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
SPECC1-201ENST00000261503 SOGA1O94964 1423 aa14.88□□□□□ -0.03
SPECC1-201ENST00000261503 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
SPECC1-201ENST00000261503 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
SPECC1-201ENST00000261503 FBLN2P98095 1184 aa14.85□□□□□ -0.03
SPECC1-201ENST00000261503 CENPBP07199 599 aaPredicted RBP14.82□□□□□ -0.04
SPECC1-201ENST00000261503 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
SPECC1-201ENST00000261503 NEUROD1Q13562 356 aa14.78□□□□□ -0.04
SPECC1-201ENST00000261503 CEP162Q5TB80 1403 aa14.78□□□□□ -0.04
SPECC1-201ENST00000261503 CLIP1P30622 1438 aa14.73□□□□□ -0.05
SPECC1-201ENST00000261503 CNGB1Q14028 1251 aaPredicted RBP14.7□□□□□ -0.06
SPECC1-201ENST00000261503 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
SPECC1-201ENST00000261503 TNIKQ9UKE5 1360 aa14.66□□□□□ -0.06
SPECC1-201ENST00000261503 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
SPECC1-201ENST00000261503 GOLGA3Q08378 1498 aa14.65□□□□□ -0.06
SPECC1-201ENST00000261503 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
SPECC1-201ENST00000261503 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
SPECC1-201ENST00000261503 POLR3GLQ9BT43 218 aa14.63□□□□□ -0.07
SPECC1-201ENST00000261503 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
SPECC1-201ENST00000261503 EEA1Q15075 1411 aa14.61□□□□□ -0.07
SPECC1-201ENST00000261503 ZNF316A6NFI3 1004 aaPredicted RBP14.6□□□□□ -0.07
SPECC1-201ENST00000261503 MYT1LQ9UL68 1186 aa14.58□□□□□ -0.08
SPECC1-201ENST00000261503 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
SPECC1-201ENST00000261503 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
SPECC1-201ENST00000261503 CHIC2Q9UKJ5 165 aa14.52□□□□□ -0.08
SPECC1-201ENST00000261503 ZNF777Q9ULD5 760 aaPredicted RBP14.52□□□□□ -0.08
SPECC1-201ENST00000261503 SMARCA2P51531 1590 aa14.52□□□□□ -0.09
SPECC1-201ENST00000261503 KANK4Q5T7N3 995 aaPredicted RBP14.49□□□□□ -0.09
SPECC1-201ENST00000261503 CUX2O14529 1486 aa14.48□□□□□ -0.09
SPECC1-201ENST00000261503 ZNF326Q5BKZ1 582 aaKnown RBP14.45□□□□□ -0.1
SPECC1-201ENST00000261503 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
SPECC1-201ENST00000261503 CARMIL1Q5VZK9 1371 aa14.43□□□□□ -0.1
SPECC1-201ENST00000261503 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
SPECC1-201ENST00000261503 PELP1Q8IZL8 1130 aaKnown RBP14.42□□□□□ -0.1
SPECC1-201ENST00000261503 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
SPECC1-201ENST00000261503 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
SPECC1-201ENST00000261503 CHMP7Q8WUX9 453 aaPredicted RBP14.41□□□□□ -0.1
SPECC1-201ENST00000261503 CADPSQ9ULU8 1353 aa14.39□□□□□ -0.11
SPECC1-201ENST00000261503 MTUS2Q5JR59 1369 aa14.39□□□□□ -0.11
SPECC1-201ENST00000261503 RRP7BPQ9NSQ0 103 aa14.37□□□□□ -0.11
SPECC1-201ENST00000261503 MIER1Q8N108 512 aa14.35□□□□□ -0.11
SPECC1-201ENST00000261503 VPS8Q8N3P4 1428 aa14.33□□□□□ -0.11
SPECC1-201ENST00000261503 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.11
SPECC1-201ENST00000261503 DDX10Q13206 875 aaKnown RBP14.33□□□□□ -0.12
SPECC1-201ENST00000261503 DNAJC5BQ9UF47 199 aa14.32□□□□□ -0.12
SPECC1-201ENST00000261503 NEFLP07196 543 aa14.31□□□□□ -0.12
SPECC1-201ENST00000261503 SIN3AQ96ST3 1273 aa14.31□□□□□ -0.12
SPECC1-201ENST00000261503 CDK11AQ9UQ88 783 aaPredicted RBP14.31□□□□□ -0.12
SPECC1-201ENST00000261503 ACIN1Q9UKV3 1341 aaKnown RBP14.3□□□□□ -0.12
SPECC1-201ENST00000261503 EIF4G1Q04637 1599 aaKnown RBP14.28□□□□□ -0.12
SPECC1-201ENST00000261503 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
SPECC1-201ENST00000261503 BCANQ96GW7 911 aa14.25□□□□□ -0.13
SPECC1-201ENST00000261503 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
SPECC1-201ENST00000261503 SYNJ1O43426 1573 aa14.23□□□□□ -0.13
SPECC1-201ENST00000261503 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
SPECC1-201ENST00000261503 ANP32CO43423 234 aa14.22□□□□□ -0.13
SPECC1-201ENST00000261503 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms