RNA–Protein interactions for RNA: ENST00000261303.12

PSMC1-201, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC1, Length 4,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-201ENST00000261303 NISCHQ9Y2I1 1504 aa25.16■■□□□ 1.62
PSMC1-201ENST00000261303 DCAF8L2P0C7V8 631 aa24.76■■□□□ 1.55
PSMC1-201ENST00000261303 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.39
PSMC1-201ENST00000261303 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
PSMC1-201ENST00000261303 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
PSMC1-201ENST00000261303 FAM9AQ8IZU1 332 aaPredicted RBP22.28■■□□□ 1.16
PSMC1-201ENST00000261303 APLP2Q06481 763 aa22.09■■□□□ 1.13
PSMC1-201ENST00000261303 TRIM41Q8WV44 630 aa22.08■■□□□ 1.12
PSMC1-201ENST00000261303 PCGF6Q9BYE7 350 aa22.08■■□□□ 1.12
PSMC1-201ENST00000261303 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
PSMC1-201ENST00000261303 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
PSMC1-201ENST00000261303 RANGAP1P46060 587 aaPredicted RBP21.62■■□□□ 1.05
PSMC1-201ENST00000261303 ZEB1P37275 1124 aaPredicted RBP21.6■■□□□ 1.05
PSMC1-201ENST00000261303 CHIC1Q5VXU3 224 aa21.6■■□□□ 1.05
PSMC1-201ENST00000261303 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
PSMC1-201ENST00000261303 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
PSMC1-201ENST00000261303 LOC105371045A0A1W2PR82 267 aa21.36■■□□□ 1.01
PSMC1-201ENST00000261303 TRIM26Q12899 539 aaPredicted RBP21.34■■□□□ 1.01
PSMC1-201ENST00000261303 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
PSMC1-201ENST00000261303 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
PSMC1-201ENST00000261303 ABCC9O60706 1549 aa21.25■□□□□ 0.99
PSMC1-201ENST00000261303 CENPBP07199 599 aaPredicted RBP21.17■□□□□ 0.98
PSMC1-201ENST00000261303 HRCP23327 699 aa21.14■□□□□ 0.98
PSMC1-201ENST00000261303 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
PSMC1-201ENST00000261303 ZCCHC6Q5VYS8 1495 aaKnown RBP20.91■□□□□ 0.94
PSMC1-201ENST00000261303 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
PSMC1-201ENST00000261303 ITGAEP38570 1179 aa20.79■□□□□ 0.92
PSMC1-201ENST00000261303 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
PSMC1-201ENST00000261303 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
PSMC1-201ENST00000261303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
PSMC1-201ENST00000261303 NEFLP07196 543 aa20.57■□□□□ 0.88
PSMC1-201ENST00000261303 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
PSMC1-201ENST00000261303 CSRNP3Q8WYN3 585 aa20.48■□□□□ 0.87
PSMC1-201ENST00000261303 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
PSMC1-201ENST00000261303 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
PSMC1-201ENST00000261303 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
PSMC1-201ENST00000261303 MYT1LQ9UL68 1186 aa20.28■□□□□ 0.84
PSMC1-201ENST00000261303 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
PSMC1-201ENST00000261303 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
PSMC1-201ENST00000261303 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
PSMC1-201ENST00000261303 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
PSMC1-201ENST00000261303 NEUROD1Q13562 356 aa20.11■□□□□ 0.81
PSMC1-201ENST00000261303 P3H3Q8IVL6 736 aa20.09■□□□□ 0.81
PSMC1-201ENST00000261303 CNGB1Q14028 1251 aaPredicted RBP20.07■□□□□ 0.8
PSMC1-201ENST00000261303 RB1CC1Q8TDY2 1594 aa20.06■□□□□ 0.8
PSMC1-201ENST00000261303 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
PSMC1-201ENST00000261303 FBLN2P98095 1184 aa20.02■□□□□ 0.8
PSMC1-201ENST00000261303 NACADO15069 1562 aa20.01■□□□□ 0.79
PSMC1-201ENST00000261303 MYT1Q01538 1121 aa19.99■□□□□ 0.79
PSMC1-201ENST00000261303 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
PSMC1-201ENST00000261303 ARID3CA6NKF2 412 aa19.86■□□□□ 0.77
PSMC1-201ENST00000261303 ANP32CO43423 234 aa19.84■□□□□ 0.77
PSMC1-201ENST00000261303 GTF3C3Q9Y5Q9 886 aa19.82■□□□□ 0.76
PSMC1-201ENST00000261303 EEA1Q15075 1411 aa19.81■□□□□ 0.76
PSMC1-201ENST00000261303 ZNF326Q5BKZ1 582 aaKnown RBP19.81■□□□□ 0.76
PSMC1-201ENST00000261303 CDK11AQ9UQ88 783 aaPredicted RBP19.8■□□□□ 0.76
PSMC1-201ENST00000261303 CLIP1P30622 1438 aa19.77■□□□□ 0.76
PSMC1-201ENST00000261303 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
PSMC1-201ENST00000261303 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
PSMC1-201ENST00000261303 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
PSMC1-201ENST00000261303 BAZ1AQ9NRL2 1556 aaPredicted RBP19.71■□□□□ 0.75
PSMC1-201ENST00000261303 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
PSMC1-201ENST00000261303 ACIN1Q9UKV3 1341 aaKnown RBP19.69■□□□□ 0.74
PSMC1-201ENST00000261303 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
PSMC1-201ENST00000261303 DAXXQ9UER7 740 aaPredicted RBP19.68■□□□□ 0.74
PSMC1-201ENST00000261303 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
PSMC1-201ENST00000261303 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
PSMC1-201ENST00000261303 TONSLQ96HA7 1378 aa19.61■□□□□ 0.73
PSMC1-201ENST00000261303 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
PSMC1-201ENST00000261303 BCANQ96GW7 911 aa19.59■□□□□ 0.73
PSMC1-201ENST00000261303 MTUS2Q5JR59 1369 aa19.55■□□□□ 0.72
PSMC1-201ENST00000261303 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
PSMC1-201ENST00000261303 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
PSMC1-201ENST00000261303 CHIC2Q9UKJ5 165 aa19.51■□□□□ 0.71
PSMC1-201ENST00000261303 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
PSMC1-201ENST00000261303 DDX10Q13206 875 aaKnown RBP19.48■□□□□ 0.71
PSMC1-201ENST00000261303 CLSPNQ9HAW4 1339 aa19.46■□□□□ 0.71
PSMC1-201ENST00000261303 CHMP7Q8WUX9 453 aaPredicted RBP19.43■□□□□ 0.7
PSMC1-201ENST00000261303 SOGA1O94964 1423 aa19.39■□□□□ 0.69
PSMC1-201ENST00000261303 TSPY4P0CV99 314 aa19.37■□□□□ 0.69
PSMC1-201ENST00000261303 TSPY10P0CW01 314 aa19.37■□□□□ 0.69
PSMC1-201ENST00000261303 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
PSMC1-201ENST00000261303 MIER1Q8N108 512 aa19.32■□□□□ 0.68
PSMC1-201ENST00000261303 RTL5Q5HYW3 569 aaPredicted RBP19.31■□□□□ 0.68
PSMC1-201ENST00000261303 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
PSMC1-201ENST00000261303 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
PSMC1-201ENST00000261303 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
PSMC1-201ENST00000261303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.67
PSMC1-201ENST00000261303 FKBP8Q14318 412 aa19.24■□□□□ 0.67
PSMC1-201ENST00000261303 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
PSMC1-201ENST00000261303 FAM9BQ8IZU0 186 aa19.22■□□□□ 0.67
PSMC1-201ENST00000261303 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
PSMC1-201ENST00000261303 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
PSMC1-201ENST00000261303 PLEKHD1A6NEE1 506 aa19.21■□□□□ 0.67
PSMC1-201ENST00000261303 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
PSMC1-201ENST00000261303 CUX2O14529 1486 aa19.2■□□□□ 0.66
PSMC1-201ENST00000261303 EIF4G2P78344 907 aaKnown RBP eCLIP19.19■□□□□ 0.66
PSMC1-201ENST00000261303 SMARCA2P51531 1590 aa19.19■□□□□ 0.66
PSMC1-201ENST00000261303 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
PSMC1-201ENST00000261303 KDM2AQ9Y2K7 1162 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms