RNA–Protein interactions for RNA: ENST00000261211.7

CDK17-201, Transcript of cyclin dependent kinase 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK17, Length 4,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-201ENST00000261211 NISCHQ9Y2I1 1504 aa27.39■■□□□ 1.98
CDK17-201ENST00000261211 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
CDK17-201ENST00000261211 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
CDK17-201ENST00000261211 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
CDK17-201ENST00000261211 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
CDK17-201ENST00000261211 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
CDK17-201ENST00000261211 ABCC9O60706 1549 aa23.36■■□□□ 1.33
CDK17-201ENST00000261211 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
CDK17-201ENST00000261211 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
CDK17-201ENST00000261211 PCGF6Q9BYE7 350 aa23.01■■□□□ 1.27
CDK17-201ENST00000261211 RANGAP1P46060 587 aaPredicted RBP22.97■■□□□ 1.27
CDK17-201ENST00000261211 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
CDK17-201ENST00000261211 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
CDK17-201ENST00000261211 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
CDK17-201ENST00000261211 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
CDK17-201ENST00000261211 APLP2Q06481 763 aa22.75■■□□□ 1.23
CDK17-201ENST00000261211 UBTFP17480 764 aaKnown RBP22.71■■□□□ 1.23
CDK17-201ENST00000261211 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
CDK17-201ENST00000261211 CCDC180Q9P1Z9 1646 aa22.61■■□□□ 1.21
CDK17-201ENST00000261211 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
CDK17-201ENST00000261211 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
CDK17-201ENST00000261211 CCER1Q8TC90 406 aaPredicted RBP22.21■■□□□ 1.15
CDK17-201ENST00000261211 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
CDK17-201ENST00000261211 ITGAEP38570 1179 aa21.9■■□□□ 1.1
CDK17-201ENST00000261211 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.09
CDK17-201ENST00000261211 HNRNPUL2Q1KMD3 747 aaKnown RBP21.86■■□□□ 1.09
CDK17-201ENST00000261211 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
CDK17-201ENST00000261211 HRCP23327 699 aa21.84■■□□□ 1.09
CDK17-201ENST00000261211 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
CDK17-201ENST00000261211 NACADO15069 1562 aa21.77■■□□□ 1.07
CDK17-201ENST00000261211 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
CDK17-201ENST00000261211 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
CDK17-201ENST00000261211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.71■■□□□ 1.07
CDK17-201ENST00000261211 CECR2Q9BXF3 1484 aa21.7■■□□□ 1.06
CDK17-201ENST00000261211 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
CDK17-201ENST00000261211 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
CDK17-201ENST00000261211 FBLN2P98095 1184 aa21.44■■□□□ 1.02
CDK17-201ENST00000261211 YTHDC1Q96MU7 727 aaKnown RBP21.4■■□□□ 1.02
CDK17-201ENST00000261211 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
CDK17-201ENST00000261211 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
CDK17-201ENST00000261211 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
CDK17-201ENST00000261211 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
CDK17-201ENST00000261211 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■□□□□ 0.99
CDK17-201ENST00000261211 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
CDK17-201ENST00000261211 MYT1LQ9UL68 1186 aa21.22■□□□□ 0.99
CDK17-201ENST00000261211 WRNQ14191 1432 aaPredicted RBP eCLIP21.16■□□□□ 0.98
CDK17-201ENST00000261211 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
CDK17-201ENST00000261211 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
CDK17-201ENST00000261211 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
CDK17-201ENST00000261211 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
CDK17-201ENST00000261211 WIZO95785 1651 aa21.05■□□□□ 0.96
CDK17-201ENST00000261211 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
CDK17-201ENST00000261211 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
CDK17-201ENST00000261211 SOGA1O94964 1423 aa20.99■□□□□ 0.95
CDK17-201ENST00000261211 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
CDK17-201ENST00000261211 CLIP1P30622 1438 aa20.97■□□□□ 0.95
CDK17-201ENST00000261211 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
CDK17-201ENST00000261211 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
CDK17-201ENST00000261211 ZNF777Q9ULD5 760 aaPredicted RBP20.88■□□□□ 0.93
CDK17-201ENST00000261211 EEA1Q15075 1411 aa20.86■□□□□ 0.93
CDK17-201ENST00000261211 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
CDK17-201ENST00000261211 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
CDK17-201ENST00000261211 TNIKQ9UKE5 1360 aa20.79■□□□□ 0.92
CDK17-201ENST00000261211 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
CDK17-201ENST00000261211 CHMP7Q8WUX9 453 aaPredicted RBP20.76■□□□□ 0.91
CDK17-201ENST00000261211 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
CDK17-201ENST00000261211 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
CDK17-201ENST00000261211 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
CDK17-201ENST00000261211 SMARCA4P51532 1647 aa20.74■□□□□ 0.91
CDK17-201ENST00000261211 CHIC2Q9UKJ5 165 aa20.73■□□□□ 0.91
CDK17-201ENST00000261211 CEP164Q9UPV0 1460 aa20.72■□□□□ 0.91
CDK17-201ENST00000261211 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
CDK17-201ENST00000261211 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
CDK17-201ENST00000261211 NEFLP07196 543 aa20.67■□□□□ 0.9
CDK17-201ENST00000261211 CUX2O14529 1486 aa20.66■□□□□ 0.9
CDK17-201ENST00000261211 MTUS2Q5JR59 1369 aa20.64■□□□□ 0.89
CDK17-201ENST00000261211 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.89
CDK17-201ENST00000261211 CARMIL1Q5VZK9 1371 aa20.58■□□□□ 0.89
CDK17-201ENST00000261211 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
CDK17-201ENST00000261211 CADPSQ9ULU8 1353 aa20.53■□□□□ 0.88
CDK17-201ENST00000261211 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
CDK17-201ENST00000261211 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
CDK17-201ENST00000261211 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
CDK17-201ENST00000261211 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
CDK17-201ENST00000261211 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
CDK17-201ENST00000261211 KCNH8Q96L42 1107 aa20.41■□□□□ 0.86
CDK17-201ENST00000261211 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
CDK17-201ENST00000261211 RAPGEF2Q9Y4G8 1499 aa20.38■□□□□ 0.85
CDK17-201ENST00000261211 ANP32CO43423 234 aa20.38■□□□□ 0.85
CDK17-201ENST00000261211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.38■□□□□ 0.856e-6■□□□□ 8.2
CDK17-201ENST00000261211 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
CDK17-201ENST00000261211 DDX10Q13206 875 aaKnown RBP20.35■□□□□ 0.85
CDK17-201ENST00000261211 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
CDK17-201ENST00000261211 GTF3C3Q9Y5Q9 886 aa20.34■□□□□ 0.85
CDK17-201ENST00000261211 TSPY4P0CV99 314 aa20.33■□□□□ 0.85
CDK17-201ENST00000261211 TSPY10P0CW01 314 aa20.33■□□□□ 0.85
CDK17-201ENST00000261211 PLEKHD1A6NEE1 506 aa20.32■□□□□ 0.84
CDK17-201ENST00000261211 NPM1P06748 294 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDK17-201ENST00000261211 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
CDK17-201ENST00000261211 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms