RNA–Protein interactions for RNA: ENST00000259038.6

MRPL47-201, Transcript of mitochondrial ribosomal protein L47, humanhuman

TSL 1 (best) BASIC

Gene MRPL47, Length 1,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47-201ENST00000259038 AEBP2Q6ZN18 517 aaPredicted RBP31.52■■■□□ 2.64
MRPL47-201ENST00000259038 CHIC1Q5VXU3 224 aa30.69■■■□□ 2.5
MRPL47-201ENST00000259038 SENP3Q9H4L4 574 aaPredicted RBP27.02■■□□□ 1.92
MRPL47-201ENST00000259038 PHF23Q9BUL5 403 aaPredicted RBP26.84■■□□□ 1.89
MRPL47-201ENST00000259038 FOXD1Q16676 465 aa24.96■■□□□ 1.59
MRPL47-201ENST00000259038 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.58
MRPL47-201ENST00000259038 ADRA2BP18089 450 aa23.75■■□□□ 1.39
MRPL47-201ENST00000259038 PPP6R1Q9UPN7 881 aa23.75■■□□□ 1.39
MRPL47-201ENST00000259038 PIAS4Q8N2W9 510 aaPredicted RBP23.53■■□□□ 1.36
MRPL47-201ENST00000259038 MSH5O43196 834 aa23.29■■□□□ 1.32
MRPL47-201ENST00000259038 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
MRPL47-201ENST00000259038 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.09
MRPL47-201ENST00000259038 MAPK8IP2Q13387 824 aaPredicted RBP21.59■■□□□ 1.05
MRPL47-201ENST00000259038 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
MRPL47-201ENST00000259038 DMRT2Q9Y5R5 561 aa21.47■■□□□ 1.03
MRPL47-201ENST00000259038 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
MRPL47-201ENST00000259038 CNKSR2Q8WXI2 1034 aa21.34■■□□□ 1.01
MRPL47-201ENST00000259038 RNF216Q9NWF9 866 aaPredicted RBP20.98■□□□□ 0.95
MRPL47-201ENST00000259038 KCNA4P22459 653 aa20.95■□□□□ 0.94
MRPL47-201ENST00000259038 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
MRPL47-201ENST00000259038 NPM3O75607 178 aaKnown RBP20.83■□□□□ 0.93
MRPL47-201ENST00000259038 DCAF8L1A6NGE4 600 aa20.55■□□□□ 0.88
MRPL47-201ENST00000259038 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
MRPL47-201ENST00000259038 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
MRPL47-201ENST00000259038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
MRPL47-201ENST00000259038 RNF39Q9H2S5 420 aa19.84■□□□□ 0.77
MRPL47-201ENST00000259038 SLC4A2P04920 1241 aa19.69■□□□□ 0.74
MRPL47-201ENST00000259038 C1QBPQ07021 282 aaKnown RBP19.68■□□□□ 0.74
MRPL47-201ENST00000259038 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
MRPL47-201ENST00000259038 U3KPZ7 1027 aaPredicted RBP19.52■□□□□ 0.72
MRPL47-201ENST00000259038 FOXD4L1Q9NU39 408 aa19.47■□□□□ 0.71
MRPL47-201ENST00000259038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.44■□□□□ 0.7
MRPL47-201ENST00000259038 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
MRPL47-201ENST00000259038 MYCNP04198 464 aaPredicted RBP19.36■□□□□ 0.69
MRPL47-201ENST00000259038 APLP2Q06481 763 aa19.34■□□□□ 0.69
MRPL47-201ENST00000259038 SAMD1Q6SPF0 538 aaPredicted RBP19.3■□□□□ 0.68
MRPL47-201ENST00000259038 ZBTB22O15209 634 aa19.19■□□□□ 0.66
MRPL47-201ENST00000259038 CAPN15O75808 1086 aa19.07■□□□□ 0.64
MRPL47-201ENST00000259038 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
MRPL47-201ENST00000259038 SPINK5Q9NQ38 1064 aaPredicted RBP19.02■□□□□ 0.64
MRPL47-201ENST00000259038 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
MRPL47-201ENST00000259038 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
MRPL47-201ENST00000259038 ATXN8OSP0DMR3 200 aa18.9■□□□□ 0.62
MRPL47-201ENST00000259038 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
MRPL47-201ENST00000259038 DSG3P32926 999 aa18.76■□□□□ 0.59
MRPL47-201ENST00000259038 ATF5Q9Y2D1 282 aaPredicted RBP18.65■□□□□ 0.58
MRPL47-201ENST00000259038 ABCB7O75027 752 aa18.58■□□□□ 0.56
MRPL47-201ENST00000259038 POLA2Q14181 598 aa18.53■□□□□ 0.56
MRPL47-201ENST00000259038 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
MRPL47-201ENST00000259038 NISCHQ9Y2I1 1504 aa18.19■□□□□ 0.5
MRPL47-201ENST00000259038 FBLN2P98095 1184 aa18.15■□□□□ 0.5
MRPL47-201ENST00000259038 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
MRPL47-201ENST00000259038 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
MRPL47-201ENST00000259038 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
MRPL47-201ENST00000259038 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
MRPL47-201ENST00000259038 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
MRPL47-201ENST00000259038 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
MRPL47-201ENST00000259038 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
MRPL47-201ENST00000259038 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
MRPL47-201ENST00000259038 SSUH2Q9Y2M2 353 aa17.54■□□□□ 0.4
MRPL47-201ENST00000259038 SPDYE4A6NLX3 237 aa17.47■□□□□ 0.39
MRPL47-201ENST00000259038 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
MRPL47-201ENST00000259038 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
MRPL47-201ENST00000259038 SPDYE1Q8NFV5 336 aaPredicted RBP17.34■□□□□ 0.37
MRPL47-201ENST00000259038 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
MRPL47-201ENST00000259038 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
MRPL47-201ENST00000259038 FKBP8Q14318 412 aa17.19■□□□□ 0.34
MRPL47-201ENST00000259038 STAG3Q9UJ98 1225 aa17.18■□□□□ 0.34
MRPL47-201ENST00000259038 CLEC11AQ9Y240 323 aa17.18■□□□□ 0.34
MRPL47-201ENST00000259038 PROM2Q8N271 834 aa17.11■□□□□ 0.33
MRPL47-201ENST00000259038 PRR29P0C7W0 189 aa17.05■□□□□ 0.32
MRPL47-201ENST00000259038 POTEHQ6S545 545 aa17.03■□□□□ 0.32
MRPL47-201ENST00000259038 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
MRPL47-201ENST00000259038 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
MRPL47-201ENST00000259038 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
MRPL47-201ENST00000259038 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
MRPL47-201ENST00000259038 ABCC9O60706 1549 aa16.77■□□□□ 0.28
MRPL47-201ENST00000259038 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
MRPL47-201ENST00000259038 CHADLQ6NUI6 762 aa16.69■□□□□ 0.26
MRPL47-201ENST00000259038 CREBZFQ9NS37 354 aa16.68■□□□□ 0.26
MRPL47-201ENST00000259038 MIER1Q8N108 512 aa16.64■□□□□ 0.25
MRPL47-201ENST00000259038 FARP1Q9Y4F1 1045 aaPredicted RBP16.63■□□□□ 0.25
MRPL47-201ENST00000259038 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
MRPL47-201ENST00000259038 HAX1O00165 279 aa16.56■□□□□ 0.24
MRPL47-201ENST00000259038 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
MRPL47-201ENST00000259038 ZBTB47Q9UFB7 747 aaPredicted RBP16.54■□□□□ 0.24
MRPL47-201ENST00000259038 VASPP50552 380 aaPredicted RBP16.47■□□□□ 0.23
MRPL47-201ENST00000259038 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
MRPL47-201ENST00000259038 MNX1P50219 401 aaPredicted RBP16.44■□□□□ 0.22
MRPL47-201ENST00000259038 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
MRPL47-201ENST00000259038 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
MRPL47-201ENST00000259038 CD44P16070 742 aaKnown RBP16.35■□□□□ 0.21
MRPL47-201ENST00000259038 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
MRPL47-201ENST00000259038 SP7Q8TDD2 431 aaPredicted RBP16.27■□□□□ 0.2
MRPL47-201ENST00000259038 CLCN6P51797 869 aa16.24■□□□□ 0.19
MRPL47-201ENST00000259038 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
MRPL47-201ENST00000259038 EVX2Q03828 476 aa16.22■□□□□ 0.19
MRPL47-201ENST00000259038 NUBP1P53384 320 aa16.16■□□□□ 0.18
MRPL47-201ENST00000259038 IFNLR1Q8IU57 520 aaPredicted RBP16.16■□□□□ 0.18
MRPL47-201ENST00000259038 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms