RNA–Protein interactions for RNA: ENST00000254029.7

WDR44-201, Transcript of WD repeat domain 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR44, Length 4,111 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR44-201ENST00000254029 NISCHQ9Y2I1 1504 aa14.49□□□□□ -0.09
WDR44-201ENST00000254029 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
WDR44-201ENST00000254029 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
WDR44-201ENST00000254029 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
WDR44-201ENST00000254029 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
WDR44-201ENST00000254029 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.33
WDR44-201ENST00000254029 PCGF6Q9BYE7 350 aa12.79□□□□□ -0.36
WDR44-201ENST00000254029 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.36
WDR44-201ENST00000254029 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
WDR44-201ENST00000254029 RANGAP1P46060 587 aaPredicted RBP12.6□□□□□ -0.39
WDR44-201ENST00000254029 ABCC9O60706 1549 aa12.56□□□□□ -0.4
WDR44-201ENST00000254029 LOC105371045A0A1W2PR82 267 aa12.56□□□□□ -0.4
WDR44-201ENST00000254029 PPARGC1BQ86YN6 1023 aaKnown RBP12.56□□□□□ -0.4
WDR44-201ENST00000254029 CHIC1Q5VXU3 224 aa12.51□□□□□ -0.41
WDR44-201ENST00000254029 UBTFP17480 764 aaKnown RBP12.34□□□□□ -0.43
WDR44-201ENST00000254029 APLP2Q06481 763 aa12.33□□□□□ -0.44
WDR44-201ENST00000254029 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
WDR44-201ENST00000254029 CCER1Q8TC90 406 aaPredicted RBP12.24□□□□□ -0.45
WDR44-201ENST00000254029 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
WDR44-201ENST00000254029 ATP1B4Q9UN42 357 aaPredicted RBP12.21□□□□□ -0.46
WDR44-201ENST00000254029 HRCP23327 699 aa12.13□□□□□ -0.47
WDR44-201ENST00000254029 TRIM26Q12899 539 aaPredicted RBP12.13□□□□□ -0.47
WDR44-201ENST00000254029 ZCCHC6Q5VYS8 1495 aaKnown RBP12.04□□□□□ -0.48
WDR44-201ENST00000254029 ITGAEP38570 1179 aa12.01□□□□□ -0.49
WDR44-201ENST00000254029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
WDR44-201ENST00000254029 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
WDR44-201ENST00000254029 YTHDC1Q96MU7 727 aaKnown RBP11.98□□□□□ -0.49
WDR44-201ENST00000254029 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
WDR44-201ENST00000254029 SCRIBQ14160 1630 aa11.94□□□□□ -0.5
WDR44-201ENST00000254029 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
WDR44-201ENST00000254029 MYT1Q01538 1121 aa11.9□□□□□ -0.5
WDR44-201ENST00000254029 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
WDR44-201ENST00000254029 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
WDR44-201ENST00000254029 CNGB1Q14028 1251 aaPredicted RBP11.69□□□□□ -0.54
WDR44-201ENST00000254029 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
WDR44-201ENST00000254029 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
WDR44-201ENST00000254029 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
WDR44-201ENST00000254029 RSF1Q96T23 1441 aaPredicted RBP11.66□□□□□ -0.54
WDR44-201ENST00000254029 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
WDR44-201ENST00000254029 FAM50AQ14320 339 aaKnown RBP11.63□□□□□ -0.55
WDR44-201ENST00000254029 ARID3CA6NKF2 412 aa11.62□□□□□ -0.55
WDR44-201ENST00000254029 POLR3GLQ9BT43 218 aa11.59□□□□□ -0.55
WDR44-201ENST00000254029 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.55
WDR44-201ENST00000254029 NEUROD1Q13562 356 aa11.57□□□□□ -0.56
WDR44-201ENST00000254029 NACADO15069 1562 aa11.56□□□□□ -0.56
WDR44-201ENST00000254029 FBLN2P98095 1184 aa11.51□□□□□ -0.57
WDR44-201ENST00000254029 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
WDR44-201ENST00000254029 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
WDR44-201ENST00000254029 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.58
WDR44-201ENST00000254029 TRIM52Q96A61 297 aa11.44□□□□□ -0.58
WDR44-201ENST00000254029 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
WDR44-201ENST00000254029 NEFLP07196 543 aa11.41□□□□□ -0.58
WDR44-201ENST00000254029 ZNF316A6NFI3 1004 aaPredicted RBP11.39□□□□□ -0.59
WDR44-201ENST00000254029 MROH2BQ7Z745 1585 aa11.38□□□□□ -0.59
WDR44-201ENST00000254029 ZNF326Q5BKZ1 582 aaKnown RBP11.37□□□□□ -0.59
WDR44-201ENST00000254029 BCANQ96GW7 911 aa11.34□□□□□ -0.59
WDR44-201ENST00000254029 SOGA1O94964 1423 aa11.32□□□□□ -0.6
WDR44-201ENST00000254029 CEP162Q5TB80 1403 aa11.32□□□□□ -0.6
WDR44-201ENST00000254029 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
WDR44-201ENST00000254029 ZNF777Q9ULD5 760 aaPredicted RBP11.3□□□□□ -0.6
WDR44-201ENST00000254029 CLIP1P30622 1438 aa11.29□□□□□ -0.6
WDR44-201ENST00000254029 WRNQ14191 1432 aaPredicted RBP eCLIP11.29□□□□□ -0.6
WDR44-201ENST00000254029 ABCC8Q09428 1581 aa11.29□□□□□ -0.6
WDR44-201ENST00000254029 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
WDR44-201ENST00000254029 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
WDR44-201ENST00000254029 ACIN1Q9UKV3 1341 aaKnown RBP11.25□□□□□ -0.61
WDR44-201ENST00000254029 BAZ1BQ9UIG0 1483 aaKnown RBP11.24□□□□□ -0.61
WDR44-201ENST00000254029 WIZO95785 1651 aa11.24□□□□□ -0.61
WDR44-201ENST00000254029 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
WDR44-201ENST00000254029 CCDC88BA6NC98 1476 aa11.24□□□□□ -0.61
WDR44-201ENST00000254029 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
WDR44-201ENST00000254029 MIER1Q8N108 512 aa11.21□□□□□ -0.62
WDR44-201ENST00000254029 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
WDR44-201ENST00000254029 GOLGA3Q08378 1498 aa11.18□□□□□ -0.62
WDR44-201ENST00000254029 ANP32CO43423 234 aa11.16□□□□□ -0.62
WDR44-201ENST00000254029 TNIKQ9UKE5 1360 aa11.16□□□□□ -0.62
WDR44-201ENST00000254029 RRP7BPQ9NSQ0 103 aa11.13□□□□□ -0.63
WDR44-201ENST00000254029 RUSC2Q8N2Y8 1516 aa11.12□□□□□ -0.63
WDR44-201ENST00000254029 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
WDR44-201ENST00000254029 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
WDR44-201ENST00000254029 ERCC6Q03468 1493 aa11.1□□□□□ -0.63
WDR44-201ENST00000254029 MTUS2Q5JR59 1369 aa11.1□□□□□ -0.63
WDR44-201ENST00000254029 SIN3AQ96ST3 1273 aa11.09□□□□□ -0.63
WDR44-201ENST00000254029 EEA1Q15075 1411 aa11.09□□□□□ -0.63
WDR44-201ENST00000254029 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
WDR44-201ENST00000254029 CEP164Q9UPV0 1460 aa11.08□□□□□ -0.64
WDR44-201ENST00000254029 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
WDR44-201ENST00000254029 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
WDR44-201ENST00000254029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.04□□□□□ -0.64
WDR44-201ENST00000254029 CDK11AQ9UQ88 783 aaPredicted RBP11.04□□□□□ -0.64
WDR44-201ENST00000254029 SENP3Q9H4L4 574 aaPredicted RBP11.03□□□□□ -0.64
WDR44-201ENST00000254029 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
WDR44-201ENST00000254029 KDM2AQ9Y2K7 1162 aa11.03□□□□□ -0.64
WDR44-201ENST00000254029 CUX2O14529 1486 aa11.02□□□□□ -0.64
WDR44-201ENST00000254029 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.64
WDR44-201ENST00000254029 FKBP8Q14318 412 aa11.01□□□□□ -0.65
WDR44-201ENST00000254029 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
WDR44-201ENST00000254029 IRX6P78412 446 aaPredicted RBP10.99□□□□□ -0.65
WDR44-201ENST00000254029 BCL11AQ9H165 835 aa10.99□□□□□ -0.65
WDR44-201ENST00000254029 CARMIL1Q5VZK9 1371 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms