RNA–Protein interactions for RNA: ENST00000252050.8

CUL9-201, Transcript of cullin 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUL9, Length 7,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9-201ENST00000252050 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
CUL9-201ENST00000252050 DCAF8L2P0C7V8 631 aa21.14■□□□□ 0.97
CUL9-201ENST00000252050 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
CUL9-201ENST00000252050 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
CUL9-201ENST00000252050 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
CUL9-201ENST00000252050 APLP2Q06481 763 aa19.19■□□□□ 0.66
CUL9-201ENST00000252050 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
CUL9-201ENST00000252050 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
CUL9-201ENST00000252050 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
CUL9-201ENST00000252050 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
CUL9-201ENST00000252050 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
CUL9-201ENST00000252050 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
CUL9-201ENST00000252050 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
CUL9-201ENST00000252050 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
CUL9-201ENST00000252050 UBTFP17480 764 aaKnown RBP18.54■□□□□ 0.56
CUL9-201ENST00000252050 CENPBP07199 599 aaPredicted RBP18.48■□□□□ 0.55
CUL9-201ENST00000252050 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
CUL9-201ENST00000252050 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
CUL9-201ENST00000252050 ERICH6Q7L0X2 663 aa18.13■□□□□ 0.49
CUL9-201ENST00000252050 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.48
CUL9-201ENST00000252050 NEFLP07196 543 aa18.05■□□□□ 0.48
CUL9-201ENST00000252050 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
CUL9-201ENST00000252050 LOC105371045A0A1W2PR82 267 aa17.96■□□□□ 0.47
CUL9-201ENST00000252050 HRCP23327 699 aa17.94■□□□□ 0.46
CUL9-201ENST00000252050 YTHDC1Q96MU7 727 aaKnown RBP17.94■□□□□ 0.46
CUL9-201ENST00000252050 ABCC9O60706 1549 aa17.92■□□□□ 0.46
CUL9-201ENST00000252050 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
CUL9-201ENST00000252050 ITGAEP38570 1179 aa17.82■□□□□ 0.44
CUL9-201ENST00000252050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
CUL9-201ENST00000252050 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
CUL9-201ENST00000252050 MYT1Q01538 1121 aa17.72■□□□□ 0.43
CUL9-201ENST00000252050 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
CUL9-201ENST00000252050 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.411e-7■■■□□ 15.6
CUL9-201ENST00000252050 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
CUL9-201ENST00000252050 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
CUL9-201ENST00000252050 ZCCHC6Q5VYS8 1495 aaKnown RBP17.55■□□□□ 0.4
CUL9-201ENST00000252050 FAM50AQ14320 339 aaKnown RBP17.51■□□□□ 0.39
CUL9-201ENST00000252050 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
CUL9-201ENST00000252050 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
CUL9-201ENST00000252050 TRIM52Q96A61 297 aa17.35■□□□□ 0.37
CUL9-201ENST00000252050 CNGB1Q14028 1251 aaPredicted RBP17.32■□□□□ 0.36
CUL9-201ENST00000252050 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
CUL9-201ENST00000252050 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
CUL9-201ENST00000252050 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
CUL9-201ENST00000252050 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
CUL9-201ENST00000252050 ANP32CO43423 234 aa17.19■□□□□ 0.34
CUL9-201ENST00000252050 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
CUL9-201ENST00000252050 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
CUL9-201ENST00000252050 FBLN2P98095 1184 aa17.14■□□□□ 0.33
CUL9-201ENST00000252050 CLSPNQ9HAW4 1339 aa17.09■□□□□ 0.33
CUL9-201ENST00000252050 NACADO15069 1562 aa17.06■□□□□ 0.32
CUL9-201ENST00000252050 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
CUL9-201ENST00000252050 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
CUL9-201ENST00000252050 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.32
CUL9-201ENST00000252050 CDK11AQ9UQ88 783 aaPredicted RBP17.02■□□□□ 0.31
CUL9-201ENST00000252050 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
CUL9-201ENST00000252050 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
CUL9-201ENST00000252050 ZNF777Q9ULD5 760 aaPredicted RBP16.88■□□□□ 0.29
CUL9-201ENST00000252050 BCANQ96GW7 911 aa16.88■□□□□ 0.29
CUL9-201ENST00000252050 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
CUL9-201ENST00000252050 ZBTB47Q9UFB7 747 aaPredicted RBP16.84■□□□□ 0.29
CUL9-201ENST00000252050 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.29
CUL9-201ENST00000252050 EEA1Q15075 1411 aa16.83■□□□□ 0.28
CUL9-201ENST00000252050 NEFMP07197 916 aa16.81■□□□□ 0.28
CUL9-201ENST00000252050 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
CUL9-201ENST00000252050 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
CUL9-201ENST00000252050 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
CUL9-201ENST00000252050 CLIP1P30622 1438 aa16.76■□□□□ 0.27
CUL9-201ENST00000252050 BAZ1BQ9UIG0 1483 aaKnown RBP16.75■□□□□ 0.27
CUL9-201ENST00000252050 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
CUL9-201ENST00000252050 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
CUL9-201ENST00000252050 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
CUL9-201ENST00000252050 CEP162Q5TB80 1403 aa16.66■□□□□ 0.26
CUL9-201ENST00000252050 ANP32AP39687 249 aaKnown RBP16.65■□□□□ 0.26
CUL9-201ENST00000252050 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
CUL9-201ENST00000252050 SLC24A1O60721 1099 aa16.64■□□□□ 0.26
CUL9-201ENST00000252050 ESF1Q9H501 851 aaKnown RBP16.63■□□□□ 0.25
CUL9-201ENST00000252050 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.25
CUL9-201ENST00000252050 CEP164Q9UPV0 1460 aa16.62■□□□□ 0.25
CUL9-201ENST00000252050 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
CUL9-201ENST00000252050 CHIC2Q9UKJ5 165 aa16.59■□□□□ 0.25
CUL9-201ENST00000252050 KIF27Q86VH2 1401 aa16.59■□□□□ 0.25
CUL9-201ENST00000252050 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.25
CUL9-201ENST00000252050 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.24
CUL9-201ENST00000252050 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
CUL9-201ENST00000252050 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
CUL9-201ENST00000252050 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
CUL9-201ENST00000252050 FKBP8Q14318 412 aa16.56■□□□□ 0.24
CUL9-201ENST00000252050 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
CUL9-201ENST00000252050 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
CUL9-201ENST00000252050 FAM9BQ8IZU0 186 aa16.53■□□□□ 0.24
CUL9-201ENST00000252050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
CUL9-201ENST00000252050 TMC1Q8TDI8 760 aa16.52■□□□□ 0.24
CUL9-201ENST00000252050 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
CUL9-201ENST00000252050 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
CUL9-201ENST00000252050 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
CUL9-201ENST00000252050 EIF4G2P78344 907 aaKnown RBP eCLIP16.44■□□□□ 0.22
CUL9-201ENST00000252050 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
CUL9-201ENST00000252050 UPF2Q9HAU5 1272 aaKnown RBP16.44■□□□□ 0.22
CUL9-201ENST00000252050 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms