RNA–Protein interactions for RNA: ENST00000246891.8

CSN1S1-201, Transcript of casein alpha s1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSN1S1, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN1S1-201ENST00000246891 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
CSN1S1-201ENST00000246891 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
CSN1S1-201ENST00000246891 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
CSN1S1-201ENST00000246891 PHF23Q9BUL5 403 aaPredicted RBP23.98■■□□□ 1.43
CSN1S1-201ENST00000246891 FOXD1Q16676 465 aa22.51■■□□□ 1.19
CSN1S1-201ENST00000246891 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
CSN1S1-201ENST00000246891 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
CSN1S1-201ENST00000246891 ADRA2BP18089 450 aa21.26■□□□□ 0.99
CSN1S1-201ENST00000246891 PIAS4Q8N2W9 510 aaPredicted RBP21.19■□□□□ 0.98
CSN1S1-201ENST00000246891 MSH5O43196 834 aa21.06■□□□□ 0.96
CSN1S1-201ENST00000246891 POTEDQ86YR6 584 aa19.79■□□□□ 0.76
CSN1S1-201ENST00000246891 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
CSN1S1-201ENST00000246891 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
CSN1S1-201ENST00000246891 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
CSN1S1-201ENST00000246891 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
CSN1S1-201ENST00000246891 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
CSN1S1-201ENST00000246891 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
CSN1S1-201ENST00000246891 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
CSN1S1-201ENST00000246891 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
CSN1S1-201ENST00000246891 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
CSN1S1-201ENST00000246891 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
CSN1S1-201ENST00000246891 KCNA4P22459 653 aa18.43■□□□□ 0.54
CSN1S1-201ENST00000246891 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
CSN1S1-201ENST00000246891 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
CSN1S1-201ENST00000246891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.89■□□□□ 0.45
CSN1S1-201ENST00000246891 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
CSN1S1-201ENST00000246891 C1QBPQ07021 282 aaKnown RBP17.76■□□□□ 0.43
CSN1S1-201ENST00000246891 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
CSN1S1-201ENST00000246891 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
CSN1S1-201ENST00000246891 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
CSN1S1-201ENST00000246891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
CSN1S1-201ENST00000246891 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
CSN1S1-201ENST00000246891 APLP2Q06481 763 aa17.24■□□□□ 0.35
CSN1S1-201ENST00000246891 MYCNP04198 464 aaPredicted RBP17.16■□□□□ 0.34
CSN1S1-201ENST00000246891 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
CSN1S1-201ENST00000246891 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
CSN1S1-201ENST00000246891 CAPN15O75808 1086 aa17.12■□□□□ 0.33
CSN1S1-201ENST00000246891 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
CSN1S1-201ENST00000246891 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
CSN1S1-201ENST00000246891 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
CSN1S1-201ENST00000246891 ZBTB22O15209 634 aa16.9■□□□□ 0.3
CSN1S1-201ENST00000246891 DSG3P32926 999 aa16.9■□□□□ 0.3
CSN1S1-201ENST00000246891 ABCB7O75027 752 aa16.7■□□□□ 0.26
CSN1S1-201ENST00000246891 ATXN8OSP0DMR3 200 aa16.64■□□□□ 0.25
CSN1S1-201ENST00000246891 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
CSN1S1-201ENST00000246891 POLA2Q14181 598 aa16.55■□□□□ 0.24
CSN1S1-201ENST00000246891 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
CSN1S1-201ENST00000246891 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
CSN1S1-201ENST00000246891 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
CSN1S1-201ENST00000246891 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
CSN1S1-201ENST00000246891 FBLN2P98095 1184 aa16.1■□□□□ 0.17
CSN1S1-201ENST00000246891 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
CSN1S1-201ENST00000246891 AKT1S1Q96B36 256 aa15.89■□□□□ 0.13
CSN1S1-201ENST00000246891 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
CSN1S1-201ENST00000246891 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
CSN1S1-201ENST00000246891 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
CSN1S1-201ENST00000246891 SPDYE2Q495Y8 402 aa15.83■□□□□ 0.12
CSN1S1-201ENST00000246891 REM2Q8IYK8 340 aaPredicted RBP15.69■□□□□ 0.1
CSN1S1-201ENST00000246891 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
CSN1S1-201ENST00000246891 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
CSN1S1-201ENST00000246891 POTEHQ6S545 545 aa15.62■□□□□ 0.09
CSN1S1-201ENST00000246891 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
CSN1S1-201ENST00000246891 PITPNM1O00562 1244 aa15.5■□□□□ 0.07
CSN1S1-201ENST00000246891 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
CSN1S1-201ENST00000246891 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
CSN1S1-201ENST00000246891 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
CSN1S1-201ENST00000246891 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
CSN1S1-201ENST00000246891 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
CSN1S1-201ENST00000246891 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
CSN1S1-201ENST00000246891 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
CSN1S1-201ENST00000246891 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
CSN1S1-201ENST00000246891 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
CSN1S1-201ENST00000246891 PROM2Q8N271 834 aa15.06■□□□□ 0
CSN1S1-201ENST00000246891 HAX1O00165 279 aa14.98□□□□□ -0.01
CSN1S1-201ENST00000246891 FKBP8Q14318 412 aa14.98□□□□□ -0.01
CSN1S1-201ENST00000246891 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
CSN1S1-201ENST00000246891 FARP1Q9Y4F1 1045 aaPredicted RBP14.87□□□□□ -0.03
CSN1S1-201ENST00000246891 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
CSN1S1-201ENST00000246891 SP7Q8TDD2 431 aaPredicted RBP14.84□□□□□ -0.03
CSN1S1-201ENST00000246891 C19orf67A6NJJ6 358 aa14.8□□□□□ -0.04
CSN1S1-201ENST00000246891 PLEKHG5O94827 1062 aa14.74□□□□□ -0.05
CSN1S1-201ENST00000246891 NPM1P06748 294 aaKnown RBP eCLIP14.71□□□□□ -0.05
CSN1S1-201ENST00000246891 EVX2Q03828 476 aa14.7□□□□□ -0.06
CSN1S1-201ENST00000246891 CD44P16070 742 aaKnown RBP14.69□□□□□ -0.06
CSN1S1-201ENST00000246891 FBXO3Q9UK99 471 aa14.69□□□□□ -0.06
CSN1S1-201ENST00000246891 MIER1Q8N108 512 aa14.66□□□□□ -0.06
CSN1S1-201ENST00000246891 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
CSN1S1-201ENST00000246891 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
CSN1S1-201ENST00000246891 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
CSN1S1-201ENST00000246891 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
CSN1S1-201ENST00000246891 CLCN6P51797 869 aa14.55□□□□□ -0.08
CSN1S1-201ENST00000246891 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
CSN1S1-201ENST00000246891 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
CSN1S1-201ENST00000246891 GABBR2O75899 941 aa14.47□□□□□ -0.09
CSN1S1-201ENST00000246891 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
CSN1S1-201ENST00000246891 TSPYL2Q9H2G4 693 aaPredicted RBP14.36□□□□□ -0.11
CSN1S1-201ENST00000246891 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
CSN1S1-201ENST00000246891 PHF12Q96QT6 1004 aa14.31□□□□□ -0.12
CSN1S1-201ENST00000246891 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
CSN1S1-201ENST00000246891 NUBP1P53384 320 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms