RNA–Protein interactions for RNA: ENST00000229633.6

HINT3-201, Transcript of histidine triad nucleotide binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HINT3, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3-201ENST00000229633 NISCHQ9Y2I1 1504 aa27.44■■□□□ 1.98
HINT3-201ENST00000229633 SHROOM4Q9ULL8 1493 aa24.49■■□□□ 1.51
HINT3-201ENST00000229633 SUPT5HO00267 1087 aaKnown RBP24.06■■□□□ 1.44
HINT3-201ENST00000229633 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
HINT3-201ENST00000229633 ZCCHC6Q5VYS8 1495 aaKnown RBP23.12■■□□□ 1.29
HINT3-201ENST00000229633 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
HINT3-201ENST00000229633 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
HINT3-201ENST00000229633 MYO15BQ96JP2 1530 aa22.79■■□□□ 1.24
HINT3-201ENST00000229633 PCGF6Q9BYE7 350 aa22.69■■□□□ 1.22
HINT3-201ENST00000229633 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
HINT3-201ENST00000229633 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
HINT3-201ENST00000229633 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
HINT3-201ENST00000229633 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
HINT3-201ENST00000229633 HRCP23327 699 aa22.29■■□□□ 1.16
HINT3-201ENST00000229633 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
HINT3-201ENST00000229633 ABCC9O60706 1549 aa22.13■■□□□ 1.13
HINT3-201ENST00000229633 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
HINT3-201ENST00000229633 DCAF1Q9Y4B6 1507 aa22.04■■□□□ 1.12
HINT3-201ENST00000229633 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
HINT3-201ENST00000229633 TTBK1Q5TCY1 1321 aaPredicted RBP21.81■■□□□ 1.08
HINT3-201ENST00000229633 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
HINT3-201ENST00000229633 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
HINT3-201ENST00000229633 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
HINT3-201ENST00000229633 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
HINT3-201ENST00000229633 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
HINT3-201ENST00000229633 WIZO95785 1651 aa21.42■■□□□ 1.02
HINT3-201ENST00000229633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
HINT3-201ENST00000229633 NACADO15069 1562 aa21.34■■□□□ 1.01
HINT3-201ENST00000229633 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
HINT3-201ENST00000229633 CCER1Q8TC90 406 aaPredicted RBP21.23■□□□□ 0.99
HINT3-201ENST00000229633 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
HINT3-201ENST00000229633 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
HINT3-201ENST00000229633 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
HINT3-201ENST00000229633 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
HINT3-201ENST00000229633 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
HINT3-201ENST00000229633 SOGA1O94964 1423 aa21.03■□□□□ 0.96
HINT3-201ENST00000229633 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
HINT3-201ENST00000229633 CSRNP3Q8WYN3 585 aa20.92■□□□□ 0.94
HINT3-201ENST00000229633 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
HINT3-201ENST00000229633 CEP162Q5TB80 1403 aa20.86■□□□□ 0.93
HINT3-201ENST00000229633 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
HINT3-201ENST00000229633 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
HINT3-201ENST00000229633 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
HINT3-201ENST00000229633 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
HINT3-201ENST00000229633 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
HINT3-201ENST00000229633 EIF4G1Q04637 1599 aaKnown RBP20.69■□□□□ 0.9
HINT3-201ENST00000229633 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
HINT3-201ENST00000229633 YTHDC1Q96MU7 727 aaKnown RBP20.69■□□□□ 0.9
HINT3-201ENST00000229633 APLP2Q06481 763 aa20.68■□□□□ 0.9
HINT3-201ENST00000229633 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.9
HINT3-201ENST00000229633 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
HINT3-201ENST00000229633 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
HINT3-201ENST00000229633 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
HINT3-201ENST00000229633 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
HINT3-201ENST00000229633 ITGAEP38570 1179 aa20.52■□□□□ 0.87
HINT3-201ENST00000229633 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
HINT3-201ENST00000229633 CLIP1P30622 1438 aa20.49■□□□□ 0.87
HINT3-201ENST00000229633 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
HINT3-201ENST00000229633 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
HINT3-201ENST00000229633 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
HINT3-201ENST00000229633 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
HINT3-201ENST00000229633 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
HINT3-201ENST00000229633 EEA1Q15075 1411 aa20.41■□□□□ 0.86
HINT3-201ENST00000229633 ZNF316A6NFI3 1004 aaPredicted RBP20.38■□□□□ 0.85
HINT3-201ENST00000229633 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
HINT3-201ENST00000229633 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
HINT3-201ENST00000229633 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
HINT3-201ENST00000229633 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
HINT3-201ENST00000229633 MIER1Q8N108 512 aa20.29■□□□□ 0.84
HINT3-201ENST00000229633 P3H3Q8IVL6 736 aa20.25■□□□□ 0.83
HINT3-201ENST00000229633 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
HINT3-201ENST00000229633 KIF21BO75037 1637 aa20.11■□□□□ 0.81
HINT3-201ENST00000229633 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
HINT3-201ENST00000229633 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
HINT3-201ENST00000229633 KIF27Q86VH2 1401 aa20■□□□□ 0.79
HINT3-201ENST00000229633 ARAP1Q96P48 1450 aa20■□□□□ 0.79
HINT3-201ENST00000229633 TOP2BQ02880 1626 aa19.99■□□□□ 0.79
HINT3-201ENST00000229633 CUX1P39880 1505 aa19.99■□□□□ 0.79
HINT3-201ENST00000229633 CUX2O14529 1486 aa19.95■□□□□ 0.78
HINT3-201ENST00000229633 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
HINT3-201ENST00000229633 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
HINT3-201ENST00000229633 DHX57Q6P158 1386 aaKnown RBP19.91■□□□□ 0.78
HINT3-201ENST00000229633 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
HINT3-201ENST00000229633 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
HINT3-201ENST00000229633 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
HINT3-201ENST00000229633 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
HINT3-201ENST00000229633 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
HINT3-201ENST00000229633 ARHGAP35Q9NRY4 1499 aa19.81■□□□□ 0.76
HINT3-201ENST00000229633 CARMIL1Q5VZK9 1371 aa19.81■□□□□ 0.76
HINT3-201ENST00000229633 IGF1RP08069 1367 aa19.81■□□□□ 0.76
HINT3-201ENST00000229633 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
HINT3-201ENST00000229633 CFTRP13569 1480 aa19.8■□□□□ 0.76
HINT3-201ENST00000229633 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.75
HINT3-201ENST00000229633 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
HINT3-201ENST00000229633 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
HINT3-201ENST00000229633 CADPSQ9ULU8 1353 aa19.74■□□□□ 0.75
HINT3-201ENST00000229633 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
HINT3-201ENST00000229633 DDX10Q13206 875 aaKnown RBP19.73■□□□□ 0.75
HINT3-201ENST00000229633 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
HINT3-201ENST00000229633 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms