RNA–Protein interactions for RNA: ENST00000229332.11

CLEC4A-201, Transcript of C-type lectin domain family 4 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLEC4A, Length 1,281 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC4A-201ENST00000229332 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
CLEC4A-201ENST00000229332 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
CLEC4A-201ENST00000229332 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
CLEC4A-201ENST00000229332 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
CLEC4A-201ENST00000229332 FOXD1Q16676 465 aa23.27■■□□□ 1.32
CLEC4A-201ENST00000229332 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.25
CLEC4A-201ENST00000229332 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
CLEC4A-201ENST00000229332 ADRA2BP18089 450 aa21.99■■□□□ 1.11
CLEC4A-201ENST00000229332 PIAS4Q8N2W9 510 aaPredicted RBP21.91■■□□□ 1.1
CLEC4A-201ENST00000229332 MSH5O43196 834 aa21.76■■□□□ 1.07
CLEC4A-201ENST00000229332 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
CLEC4A-201ENST00000229332 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
CLEC4A-201ENST00000229332 PPP4R3CPQ6ZMV5 832 aa20.07■□□□□ 0.8
CLEC4A-201ENST00000229332 MAPK8IP2Q13387 824 aaPredicted RBP20.04■□□□□ 0.8
CLEC4A-201ENST00000229332 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
CLEC4A-201ENST00000229332 CNKSR2Q8WXI2 1034 aa19.65■□□□□ 0.74
CLEC4A-201ENST00000229332 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
CLEC4A-201ENST00000229332 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
CLEC4A-201ENST00000229332 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
CLEC4A-201ENST00000229332 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
CLEC4A-201ENST00000229332 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
CLEC4A-201ENST00000229332 KCNA4P22459 653 aa19.07■□□□□ 0.64
CLEC4A-201ENST00000229332 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
CLEC4A-201ENST00000229332 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
CLEC4A-201ENST00000229332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLEC4A-201ENST00000229332 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
CLEC4A-201ENST00000229332 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
CLEC4A-201ENST00000229332 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
CLEC4A-201ENST00000229332 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
CLEC4A-201ENST00000229332 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
CLEC4A-201ENST00000229332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
CLEC4A-201ENST00000229332 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
CLEC4A-201ENST00000229332 APLP2Q06481 763 aa17.81■□□□□ 0.44
CLEC4A-201ENST00000229332 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
CLEC4A-201ENST00000229332 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
CLEC4A-201ENST00000229332 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
CLEC4A-201ENST00000229332 CAPN15O75808 1086 aa17.72■□□□□ 0.43
CLEC4A-201ENST00000229332 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
CLEC4A-201ENST00000229332 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
CLEC4A-201ENST00000229332 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
CLEC4A-201ENST00000229332 ZBTB22O15209 634 aa17.47■□□□□ 0.39
CLEC4A-201ENST00000229332 DSG3P32926 999 aa17.47■□□□□ 0.39
CLEC4A-201ENST00000229332 ABCB7O75027 752 aa17.29■□□□□ 0.36
CLEC4A-201ENST00000229332 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
CLEC4A-201ENST00000229332 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
CLEC4A-201ENST00000229332 POLA2Q14181 598 aa17.12■□□□□ 0.33
CLEC4A-201ENST00000229332 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
CLEC4A-201ENST00000229332 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
CLEC4A-201ENST00000229332 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
CLEC4A-201ENST00000229332 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
CLEC4A-201ENST00000229332 FBLN2P98095 1184 aa16.65■□□□□ 0.26
CLEC4A-201ENST00000229332 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
CLEC4A-201ENST00000229332 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
CLEC4A-201ENST00000229332 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
CLEC4A-201ENST00000229332 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
CLEC4A-201ENST00000229332 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
CLEC4A-201ENST00000229332 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
CLEC4A-201ENST00000229332 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
CLEC4A-201ENST00000229332 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
CLEC4A-201ENST00000229332 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
CLEC4A-201ENST00000229332 POTEHQ6S545 545 aa16.15■□□□□ 0.18
CLEC4A-201ENST00000229332 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
CLEC4A-201ENST00000229332 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
CLEC4A-201ENST00000229332 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
CLEC4A-201ENST00000229332 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLEC4A-201ENST00000229332 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
CLEC4A-201ENST00000229332 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
CLEC4A-201ENST00000229332 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
CLEC4A-201ENST00000229332 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLEC4A-201ENST00000229332 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
CLEC4A-201ENST00000229332 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
CLEC4A-201ENST00000229332 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
CLEC4A-201ENST00000229332 PROM2Q8N271 834 aa15.56■□□□□ 0.08
CLEC4A-201ENST00000229332 FKBP8Q14318 412 aa15.51■□□□□ 0.07
CLEC4A-201ENST00000229332 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
CLEC4A-201ENST00000229332 HAX1O00165 279 aa15.5■□□□□ 0.07
CLEC4A-201ENST00000229332 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
CLEC4A-201ENST00000229332 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
CLEC4A-201ENST00000229332 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
CLEC4A-201ENST00000229332 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
CLEC4A-201ENST00000229332 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
CLEC4A-201ENST00000229332 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLEC4A-201ENST00000229332 EVX2Q03828 476 aa15.2■□□□□ 0.02
CLEC4A-201ENST00000229332 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
CLEC4A-201ENST00000229332 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
CLEC4A-201ENST00000229332 MIER1Q8N108 512 aa15.17■□□□□ 0.02
CLEC4A-201ENST00000229332 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
CLEC4A-201ENST00000229332 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CLEC4A-201ENST00000229332 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
CLEC4A-201ENST00000229332 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
CLEC4A-201ENST00000229332 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
CLEC4A-201ENST00000229332 CLCN6P51797 869 aa15.02■□□□□ -0
CLEC4A-201ENST00000229332 GABBR2O75899 941 aa14.97□□□□□ -0.01
CLEC4A-201ENST00000229332 ZNF579Q8NAF0 562 aaKnown RBP14.97□□□□□ -0.01
CLEC4A-201ENST00000229332 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
CLEC4A-201ENST00000229332 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
CLEC4A-201ENST00000229332 PHF12Q96QT6 1004 aa14.8□□□□□ -0.04
CLEC4A-201ENST00000229332 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
CLEC4A-201ENST00000229332 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
CLEC4A-201ENST00000229332 NUBP1P53384 320 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms