RNA–Protein interactions for RNA: ENST00000196371.9

OXCT1-201, Transcript of 3-oxoacid CoA-transferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OXCT1, Length 3,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OXCT1-201ENST00000196371 NISCHQ9Y2I1 1504 aa22.05■■□□□ 1.12
OXCT1-201ENST00000196371 SHROOM4Q9ULL8 1493 aa19.23■□□□□ 0.67
OXCT1-201ENST00000196371 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.61
OXCT1-201ENST00000196371 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
OXCT1-201ENST00000196371 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
OXCT1-201ENST00000196371 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
OXCT1-201ENST00000196371 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
OXCT1-201ENST00000196371 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
OXCT1-201ENST00000196371 DCAF1Q9Y4B6 1507 aa17.87■□□□□ 0.45
OXCT1-201ENST00000196371 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
OXCT1-201ENST00000196371 SCRIBQ14160 1630 aa17.73■□□□□ 0.43
OXCT1-201ENST00000196371 PCGF6Q9BYE7 350 aa17.7■□□□□ 0.42
OXCT1-201ENST00000196371 ABCC9O60706 1549 aa17.63■□□□□ 0.41
OXCT1-201ENST00000196371 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
OXCT1-201ENST00000196371 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
OXCT1-201ENST00000196371 HRCP23327 699 aa17.49■□□□□ 0.39
OXCT1-201ENST00000196371 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
OXCT1-201ENST00000196371 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
OXCT1-201ENST00000196371 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
OXCT1-201ENST00000196371 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
OXCT1-201ENST00000196371 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
OXCT1-201ENST00000196371 MROH2BQ7Z745 1585 aa17.25■□□□□ 0.35
OXCT1-201ENST00000196371 NACADO15069 1562 aa17.23■□□□□ 0.35
OXCT1-201ENST00000196371 WIZO95785 1651 aa17.16■□□□□ 0.34
OXCT1-201ENST00000196371 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
OXCT1-201ENST00000196371 PABPN1Q86U42 306 aaKnown RBP eCLIP16.99■□□□□ 0.31
OXCT1-201ENST00000196371 TTBK1Q5TCY1 1321 aaPredicted RBP16.91■□□□□ 0.3
OXCT1-201ENST00000196371 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
OXCT1-201ENST00000196371 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
OXCT1-201ENST00000196371 CCDC88BA6NC98 1476 aa16.8■□□□□ 0.28
OXCT1-201ENST00000196371 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
OXCT1-201ENST00000196371 SMARCA4P51532 1647 aa16.79■□□□□ 0.28
OXCT1-201ENST00000196371 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
OXCT1-201ENST00000196371 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
OXCT1-201ENST00000196371 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
OXCT1-201ENST00000196371 SOGA1O94964 1423 aa16.7■□□□□ 0.26
OXCT1-201ENST00000196371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
OXCT1-201ENST00000196371 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
OXCT1-201ENST00000196371 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
OXCT1-201ENST00000196371 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
OXCT1-201ENST00000196371 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
OXCT1-201ENST00000196371 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
OXCT1-201ENST00000196371 RANGAP1P46060 587 aaPredicted RBP16.56■□□□□ 0.24
OXCT1-201ENST00000196371 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
OXCT1-201ENST00000196371 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
OXCT1-201ENST00000196371 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
OXCT1-201ENST00000196371 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
OXCT1-201ENST00000196371 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
OXCT1-201ENST00000196371 BAZ1BQ9UIG0 1483 aaKnown RBP16.39■□□□□ 0.21
OXCT1-201ENST00000196371 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
OXCT1-201ENST00000196371 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
OXCT1-201ENST00000196371 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
OXCT1-201ENST00000196371 EEA1Q15075 1411 aa16.32■□□□□ 0.2
OXCT1-201ENST00000196371 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
OXCT1-201ENST00000196371 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
OXCT1-201ENST00000196371 CLIP1P30622 1438 aa16.24■□□□□ 0.19
OXCT1-201ENST00000196371 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
OXCT1-201ENST00000196371 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
OXCT1-201ENST00000196371 APLP2Q06481 763 aa16.18■□□□□ 0.18
OXCT1-201ENST00000196371 DIEXFQ68CQ4 756 aaKnown RBP16.18■□□□□ 0.18
OXCT1-201ENST00000196371 KIF21BO75037 1637 aa16.13■□□□□ 0.17
OXCT1-201ENST00000196371 VPS8Q8N3P4 1428 aa16.1■□□□□ 0.17
OXCT1-201ENST00000196371 TOP2BQ02880 1626 aa16.08■□□□□ 0.16
OXCT1-201ENST00000196371 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
OXCT1-201ENST00000196371 KANK4Q5T7N3 995 aaPredicted RBP16.03■□□□□ 0.16
OXCT1-201ENST00000196371 CUX1P39880 1505 aa16.02■□□□□ 0.16
OXCT1-201ENST00000196371 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
OXCT1-201ENST00000196371 NCAPD3P42695 1498 aa16.01■□□□□ 0.15
OXCT1-201ENST00000196371 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
OXCT1-201ENST00000196371 ITGAEP38570 1179 aa15.98■□□□□ 0.15
OXCT1-201ENST00000196371 ACIN1Q9UKV3 1341 aaKnown RBP15.98■□□□□ 0.15
OXCT1-201ENST00000196371 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
OXCT1-201ENST00000196371 PRXQ9BXM0 1461 aa15.96■□□□□ 0.14
OXCT1-201ENST00000196371 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
OXCT1-201ENST00000196371 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
OXCT1-201ENST00000196371 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
OXCT1-201ENST00000196371 CFTRP13569 1480 aa15.91■□□□□ 0.14
OXCT1-201ENST00000196371 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
OXCT1-201ENST00000196371 MIER1Q8N108 512 aa15.89■□□□□ 0.13
OXCT1-201ENST00000196371 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
OXCT1-201ENST00000196371 CUX2O14529 1486 aa15.87■□□□□ 0.13
OXCT1-201ENST00000196371 ERICH3Q5RHP9 1530 aa15.86■□□□□ 0.13
OXCT1-201ENST00000196371 ATP1B4Q9UN42 357 aaPredicted RBP15.86■□□□□ 0.13
OXCT1-201ENST00000196371 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
OXCT1-201ENST00000196371 ARHGAP35Q9NRY4 1499 aa15.82■□□□□ 0.12
OXCT1-201ENST00000196371 IGF1RP08069 1367 aa15.81■□□□□ 0.12
OXCT1-201ENST00000196371 CADPSQ9ULU8 1353 aa15.8■□□□□ 0.12
OXCT1-201ENST00000196371 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
OXCT1-201ENST00000196371 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.12
OXCT1-201ENST00000196371 CARMIL1Q5VZK9 1371 aa15.75■□□□□ 0.11
OXCT1-201ENST00000196371 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
OXCT1-201ENST00000196371 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
OXCT1-201ENST00000196371 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
OXCT1-201ENST00000196371 FAM50AQ14320 339 aaKnown RBP15.7■□□□□ 0.1
OXCT1-201ENST00000196371 NESP48681 1621 aa15.7■□□□□ 0.1
OXCT1-201ENST00000196371 RRBP1Q9P2E9 1410 aaKnown RBP15.68■□□□□ 0.1
OXCT1-201ENST00000196371 FANCD2Q9BXW9 1451 aa15.67■□□□□ 0.1
OXCT1-201ENST00000196371 DNAJC5BQ9UF47 199 aa15.66■□□□□ 0.1
OXCT1-201ENST00000196371 FHOD3Q2V2M9 1422 aa15.63■□□□□ 0.09
OXCT1-201ENST00000196371 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms