RNA–Protein interactions for RNA: ENSMUST00000227200.1

Ccdc187-203, Transcript of Coiled-coil domain-containing protein 187, mousemouse

APPRIS ALT2 BASIC

Gene Ccdc187, Length 9,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187-203ENSMUST00000227200 Rhox8Q6VSS7 320 aa14.76□□□□□ -0.05
Ccdc187-203ENSMUST00000227200 Rpgrip1Q9EPQ2 1331 aa14.7□□□□□ -0.06
Ccdc187-203ENSMUST00000227200 Las1lA2BE28 776 aaKnown RBP14.17□□□□□ -0.14
Ccdc187-203ENSMUST00000227200 Cngb1E1AZ71 1325 aa14.1□□□□□ -0.15
Ccdc187-203ENSMUST00000227200 Pelp1Q9DBD5 1123 aaKnown RBP14.03□□□□□ -0.16
Ccdc187-203ENSMUST00000227200 Wdr66E9Q743 1299 aa13.46□□□□□ -0.25
Ccdc187-203ENSMUST00000227200 4930567H17RikQ3V0K5 233 aa13.41□□□□□ -0.26
Ccdc187-203ENSMUST00000227200 Myt1Q8CFC2 1127 aa13.39□□□□□ -0.27
Ccdc187-203ENSMUST00000227200 CenpbP27790 599 aa13.33□□□□□ -0.27
Ccdc187-203ENSMUST00000227200 Rtl1Q7M732 1744 aa13.32□□□□□ -0.28
Ccdc187-203ENSMUST00000227200 Esf1Q3V1V3 845 aaKnown RBP13.3□□□□□ -0.28
Ccdc187-203ENSMUST00000227200 Ube2uB1AUC4 352 aa13.28□□□□□ -0.28
Ccdc187-203ENSMUST00000227200 Amer1Q7TS75 1132 aa13.27□□□□□ -0.28
Ccdc187-203ENSMUST00000227200 Ehmt2Q9Z148 1263 aaKnown RBP13.22□□□□□ -0.29
Ccdc187-203ENSMUST00000227200 Acin1Q9JIX8 1338 aaKnown RBP13.19□□□□□ -0.3
Ccdc187-203ENSMUST00000227200 Zeb1Q64318 1117 aa13.16□□□□□ -0.3
Ccdc187-203ENSMUST00000227200 Ccdc180J3QNE4 1664 aa13.11□□□□□ -0.31
Ccdc187-203ENSMUST00000227200 Stra8P70278 393 aa13.03□□□□□ -0.32
Ccdc187-203ENSMUST00000227200 Npm2Q80W85 207 aa13.03□□□□□ -0.32
Ccdc187-203ENSMUST00000227200 NefmP08553 848 aa13□□□□□ -0.33
Ccdc187-203ENSMUST00000227200 Trim41Q5NCC3 630 aa12.98□□□□□ -0.33
Ccdc187-203ENSMUST00000227200 Ccdc136Q3TVA9 1136 aa12.91□□□□□ -0.34
Ccdc187-203ENSMUST00000227200 NischQ80TM9 1593 aa12.88□□□□□ -0.35
Ccdc187-203ENSMUST00000227200 Tnnt3Q9QZ47 272 aa12.76□□□□□ -0.37
Ccdc187-203ENSMUST00000227200 Rtl5Q5DTT4 599 aa12.75□□□□□ -0.37
Ccdc187-203ENSMUST00000227200 Pcgf6Q99NA9 353 aa12.71□□□□□ -0.37
Ccdc187-203ENSMUST00000227200 Myt1lP97500 1187 aa12.71□□□□□ -0.37
Ccdc187-203ENSMUST00000227200 Cdk11bP24788 784 aaKnown RBP12.7□□□□□ -0.38
Ccdc187-203ENSMUST00000227200 Gab3Q8BSM5 595 aa12.65□□□□□ -0.38
Ccdc187-203ENSMUST00000227200 HrcG5E8J6 738 aa12.57□□□□□ -0.4
Ccdc187-203ENSMUST00000227200 DiexfQ8BTT6 772 aaKnown RBP12.56□□□□□ -0.4
Ccdc187-203ENSMUST00000227200 Anp32bQ9EST5 272 aaKnown RBP12.52□□□□□ -0.4
Ccdc187-203ENSMUST00000227200 4933416C03RikQ3V063 378 aa12.5□□□□□ -0.41
Ccdc187-203ENSMUST00000227200 Nop58Q6DFW4 536 aaKnown RBP12.48□□□□□ -0.41
Ccdc187-203ENSMUST00000227200 Ttbk1Q6PCN3 1308 aa12.46□□□□□ -0.42
Ccdc187-203ENSMUST00000227200 NeflP08551 543 aa12.38□□□□□ -0.43
Ccdc187-203ENSMUST00000227200 UbtfP25976 765 aaKnown RBP12.35□□□□□ -0.43
Ccdc187-203ENSMUST00000227200 Os9Q8K2C7 672 aa12.31□□□□□ -0.44
Ccdc187-203ENSMUST00000227200 NrdcQ8BHG1 1161 aa12.31□□□□□ -0.44
Ccdc187-203ENSMUST00000227200 Slc24a1Q91WD8 1130 aa12.29□□□□□ -0.44
Ccdc187-203ENSMUST00000227200 Supt5hO55201 1082 aaKnown RBP12.29□□□□□ -0.44
Ccdc187-203ENSMUST00000227200 Anp32aO35381 247 aa12.26□□□□□ -0.45
Ccdc187-203ENSMUST00000227200 Neurod1Q60867 357 aa12.23□□□□□ -0.45
Ccdc187-203ENSMUST00000227200 NclP09405 707 aaKnown RBP12.23□□□□□ -0.45
Ccdc187-203ENSMUST00000227200 Il27Q8K3I6 234 aa12.21□□□□□ -0.45
Ccdc187-203ENSMUST00000227200 Ythdc1E9Q5K9 736 aaKnown RBP12.2□□□□□ -0.46
Ccdc187-203ENSMUST00000227200 TonslQ6NZL6 1363 aa12.18□□□□□ -0.46
Ccdc187-203ENSMUST00000227200 ClspnQ80YR7 1315 aa12.15□□□□□ -0.46
Ccdc187-203ENSMUST00000227200 Aplp2Q06335 707 aa12.14□□□□□ -0.47
Ccdc187-203ENSMUST00000227200 Ccdc9Q8VC31 543 aaKnown RBP12.12□□□□□ -0.47
Ccdc187-203ENSMUST00000227200 Fam50aQ9WV03 339 aaKnown RBP12.12□□□□□ -0.47
Ccdc187-203ENSMUST00000227200 Anks4bQ8K3X6 423 aa12.11□□□□□ -0.47
Ccdc187-203ENSMUST00000227200 Zcchc6Q5BLK4 1491 aaKnown RBP12.1□□□□□ -0.47
Ccdc187-203ENSMUST00000227200 Hdac5Q9Z2V6 1113 aa12.1□□□□□ -0.47
Ccdc187-203ENSMUST00000227200 Gm13697A2AK42 830 aa12.07□□□□□ -0.48
Ccdc187-203ENSMUST00000227200 Dcaf1Q80TR8 1506 aa12.05□□□□□ -0.48
Ccdc187-203ENSMUST00000227200 Eif5bQ05D44 1216 aaKnown RBP12.03□□□□□ -0.48
Ccdc187-203ENSMUST00000227200 Gm35339A0A140LHH9 1649 aa12.03□□□□□ -0.48
Ccdc187-203ENSMUST00000227200 Abcc9P70170 1546 aa12.01□□□□□ -0.49
Ccdc187-203ENSMUST00000227200 DaxxO35613 739 aa11.99□□□□□ -0.49
Ccdc187-203ENSMUST00000227200 Mier1Q5UAK0 511 aa11.95□□□□□ -0.5
Ccdc187-203ENSMUST00000227200 Ap3b1Q9Z1T1 1105 aa11.92□□□□□ -0.5
Ccdc187-203ENSMUST00000227200 Npm1Q61937 292 aaKnown RBP11.89□□□□□ -0.51
Ccdc187-203ENSMUST00000227200 CatipB9EKE5 520 aa11.89□□□□□ -0.51
Ccdc187-203ENSMUST00000227200 Csrnp3P59055 597 aa11.88□□□□□ -0.51
Ccdc187-203ENSMUST00000227200 Gm13695A2AK44 830 aa11.85□□□□□ -0.51
Ccdc187-203ENSMUST00000227200 Hnrnpul2Q00PI9 745 aaKnown RBP11.83□□□□□ -0.52
Ccdc187-203ENSMUST00000227200 Atp1b4Q99ME6 356 aa11.8□□□□□ -0.52
Ccdc187-203ENSMUST00000227200 Nlrp6Q91WS2 869 aa11.8□□□□□ -0.52
Ccdc187-203ENSMUST00000227200 Hsp90aa1P07901 733 aaKnown RBP11.78□□□□□ -0.52
Ccdc187-203ENSMUST00000227200 Ppargc1bQ8VHJ7 1014 aa11.76□□□□□ -0.53
Ccdc187-203ENSMUST00000227200 Upf2A2AT37 1269 aaKnown RBP11.75□□□□□ -0.53
Ccdc187-203ENSMUST00000227200 Calr4Q3TQS0 420 aa11.73□□□□□ -0.53
Ccdc187-203ENSMUST00000227200 Cep164Q5DU05 1446 aa11.71□□□□□ -0.53
Ccdc187-203ENSMUST00000227200 Sall2Q9QX96 1004 aa11.71□□□□□ -0.53
Ccdc187-203ENSMUST00000227200 Erich6D3Z6S9 713 aa11.71□□□□□ -0.54
Ccdc187-203ENSMUST00000227200 Zbtb7cQ8VCZ7 619 aa11.69□□□□□ -0.54
Ccdc187-203ENSMUST00000227200 Wdr43Q6ZQL4 677 aaKnown RBP11.68□□□□□ -0.54
Ccdc187-203ENSMUST00000227200 Chic1Q8CBW7 227 aa11.67□□□□□ -0.54
Ccdc187-203ENSMUST00000227200 Ifnlr1Q8CGK5 535 aa11.64□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 Ccer2J3QPU5 274 aa11.64□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 1700123L14RikQ3V2K7 440 aa11.64□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 Brd4Q9ESU6 1400 aaKnown RBP11.63□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 Ppp4r2Q0VGB7 417 aa11.63□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 Ccdc27Q3V036 639 aa11.62□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 Bcl11aQ9QYE3 773 aa11.61□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 Gm38655A0A286YDK6 273 aa11.59□□□□□ -0.55
Ccdc187-203ENSMUST00000227200 Safb2Q80YR5 991 aaKnown RBP11.58□□□□□ -0.56
Ccdc187-203ENSMUST00000227200 Rb1cc1Q9ESK9 1588 aa11.57□□□□□ -0.56
Ccdc187-203ENSMUST00000227200 Trim44Q9QXA7 346 aa11.56□□□□□ -0.56
Ccdc187-203ENSMUST00000227200 Polr3glQ8R0C0 218 aa11.55□□□□□ -0.56
Ccdc187-203ENSMUST00000227200 Fam71e1A1L3C1 212 aa11.52□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Lmod2Q3UHZ5 550 aa11.51□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Irx3P81067 507 aa11.51□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Htatsf1Q8BGC0 757 aa11.49□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Znf326O88291 580 aa11.49□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Clstn2Q9ER65 966 aa11.49□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Plppr3Q7TPB0 716 aa11.48□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Plekhg3Q4VAC9 1341 aa11.46□□□□□ -0.57
Ccdc187-203ENSMUST00000227200 Clip1Q922J3 1391 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms