RNA–Protein interactions for RNA: ENSMUST00000223690.1

Vti1a-202, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

BASIC

Gene Vti1a, Length 4,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1a-202ENSMUST00000223690 NischQ80TM9 1593 aa17.69■□□□□ 0.42
Vti1a-202ENSMUST00000223690 Rhox8Q6VSS7 320 aa17.27■□□□□ 0.35
Vti1a-202ENSMUST00000223690 Abcc9P70170 1546 aa16.93■□□□□ 0.3
Vti1a-202ENSMUST00000223690 Gm35339A0A140LHH9 1649 aa16.83■□□□□ 0.28
Vti1a-202ENSMUST00000223690 Abcc8B2RUS7 1588 aa16.69■□□□□ 0.26
Vti1a-202ENSMUST00000223690 Ube2uB1AUC4 352 aa16.09■□□□□ 0.17
Vti1a-202ENSMUST00000223690 Ccdc136Q3TVA9 1136 aa15.89■□□□□ 0.13
Vti1a-202ENSMUST00000223690 ScribQ80U72 1612 aa15.51■□□□□ 0.07
Vti1a-202ENSMUST00000223690 Zcchc6Q5BLK4 1491 aaKnown RBP15.5■□□□□ 0.07
Vti1a-202ENSMUST00000223690 Rb1cc1Q9ESK9 1588 aa15.48■□□□□ 0.07
Vti1a-202ENSMUST00000223690 Rtl1Q7M732 1744 aa15.43■□□□□ 0.06
Vti1a-202ENSMUST00000223690 NacadQ5SWP3 1504 aa15.43■□□□□ 0.06
Vti1a-202ENSMUST00000223690 Kdm5dQ62240 1548 aa15.43■□□□□ 0.06
Vti1a-202ENSMUST00000223690 Trim41Q5NCC3 630 aa15.41■□□□□ 0.06
Vti1a-202ENSMUST00000223690 Ehmt2Q9Z148 1263 aaKnown RBP15.37■□□□□ 0.05
Vti1a-202ENSMUST00000223690 Dcaf1Q80TR8 1506 aa15.35■□□□□ 0.05
Vti1a-202ENSMUST00000223690 Ccdc180J3QNE4 1664 aa15.32■□□□□ 0.04
Vti1a-202ENSMUST00000223690 Cngb1E1AZ71 1325 aa15.32■□□□□ 0.04
Vti1a-202ENSMUST00000223690 Esf1Q3V1V3 845 aaKnown RBP15.31■□□□□ 0.04
Vti1a-202ENSMUST00000223690 Baz1aO88379 1555 aa15.21■□□□□ 0.03
Vti1a-202ENSMUST00000223690 Gab3Q8BSM5 595 aa15.04■□□□□ -0
Vti1a-202ENSMUST00000223690 Sycp2Q9CUU3 1500 aa15.01□□□□□ -0.01
Vti1a-202ENSMUST00000223690 Rpgrip1Q9EPQ2 1331 aa14.99□□□□□ -0.01
Vti1a-202ENSMUST00000223690 HrcG5E8J6 738 aa14.99□□□□□ -0.01
Vti1a-202ENSMUST00000223690 Ppargc1bQ8VHJ7 1014 aa14.92□□□□□ -0.02
Vti1a-202ENSMUST00000223690 Kcna4Q61423 654 aa14.83□□□□□ -0.04
Vti1a-202ENSMUST00000223690 Brd4Q9ESU6 1400 aaKnown RBP14.82□□□□□ -0.04
Vti1a-202ENSMUST00000223690 Crybg2B7ZCC2 1516 aa14.8□□□□□ -0.04
Vti1a-202ENSMUST00000223690 Smarca2Q6DIC0 1577 aa14.71□□□□□ -0.05
Vti1a-202ENSMUST00000223690 Ttbk1Q6PCN3 1308 aa14.71□□□□□ -0.05
Vti1a-202ENSMUST00000223690 Cecr2E9Q2Z1 1453 aa14.69□□□□□ -0.06
Vti1a-202ENSMUST00000223690 Npm2Q80W85 207 aa14.68□□□□□ -0.06
Vti1a-202ENSMUST00000223690 Chic1Q8CBW7 227 aa14.67□□□□□ -0.06
Vti1a-202ENSMUST00000223690 Il27Q8K3I6 234 aa14.67□□□□□ -0.06
Vti1a-202ENSMUST00000223690 Myt1lP97500 1187 aa14.65□□□□□ -0.06
Vti1a-202ENSMUST00000223690 Mapk8ip2Q9ERE9 830 aa14.6□□□□□ -0.07
Vti1a-202ENSMUST00000223690 Acin1Q9JIX8 1338 aaKnown RBP14.58□□□□□ -0.08
Vti1a-202ENSMUST00000223690 Zeb1Q64318 1117 aa14.56□□□□□ -0.08
Vti1a-202ENSMUST00000223690 Plppr3Q7TPB0 716 aa14.56□□□□□ -0.08
Vti1a-202ENSMUST00000223690 BicraF8VPZ9 1578 aa14.53□□□□□ -0.08
Vti1a-202ENSMUST00000223690 Golga3P55937 1487 aa14.5□□□□□ -0.09
Vti1a-202ENSMUST00000223690 Cep164Q5DU05 1446 aa14.48□□□□□ -0.09
Vti1a-202ENSMUST00000223690 CftrP26361 1476 aa14.45□□□□□ -0.1
Vti1a-202ENSMUST00000223690 Synj1Q8CHC4 1574 aa14.44□□□□□ -0.1
Vti1a-202ENSMUST00000223690 Rsf1E9PWW9 1441 aaKnown RBP14.41□□□□□ -0.1
Vti1a-202ENSMUST00000223690 Pds5bQ4VA53 1446 aaKnown RBP14.41□□□□□ -0.1
Vti1a-202ENSMUST00000223690 DiexfQ8BTT6 772 aaKnown RBP14.36□□□□□ -0.11
Vti1a-202ENSMUST00000223690 Smarca4Q3TKT4 1613 aaKnown RBP14.36□□□□□ -0.11
Vti1a-202ENSMUST00000223690 Ccdc88bQ4QRL3 1481 aa14.34□□□□□ -0.11
Vti1a-202ENSMUST00000223690 Ubl4bQ9CQ84 188 aa14.33□□□□□ -0.12
Vti1a-202ENSMUST00000223690 Atad2bE9Q166 1460 aaKnown RBP14.32□□□□□ -0.12
Vti1a-202ENSMUST00000223690 Npm1Q61937 292 aaKnown RBP14.3□□□□□ -0.12
Vti1a-202ENSMUST00000223690 UbtfP25976 765 aaKnown RBP14.28□□□□□ -0.12
Vti1a-202ENSMUST00000223690 Ercc6F8VPZ5 1481 aa14.28□□□□□ -0.12
Vti1a-202ENSMUST00000223690 Kif15Q6P9L6 1387 aa14.23□□□□□ -0.13
Vti1a-202ENSMUST00000223690 Cttnbp2B9EJA2 1648 aa14.23□□□□□ -0.13
Vti1a-202ENSMUST00000223690 Iqgap2Q3UQ44 1575 aa14.23□□□□□ -0.13
Vti1a-202ENSMUST00000223690 Pcgf6Q99NA9 353 aa14.22□□□□□ -0.13
Vti1a-202ENSMUST00000223690 Ap3b1Q9Z1T1 1105 aa14.21□□□□□ -0.14
Vti1a-202ENSMUST00000223690 Las1lA2BE28 776 aaKnown RBP14.12□□□□□ -0.15
Vti1a-202ENSMUST00000223690 Fmn1Q05860 1466 aa14.11□□□□□ -0.15
Vti1a-202ENSMUST00000223690 Plekhg3Q4VAC9 1341 aa14.05□□□□□ -0.16
Vti1a-202ENSMUST00000223690 ArxO35085 564 aa14.03□□□□□ -0.16
Vti1a-202ENSMUST00000223690 Phldb1Q6PDH0 1371 aaKnown RBP13.99□□□□□ -0.17
Vti1a-202ENSMUST00000223690 Frmpd1A2AKB4 1549 aa13.99□□□□□ -0.17
Vti1a-202ENSMUST00000223690 Ccdc18Q640L5 1455 aa13.98□□□□□ -0.17
Vti1a-202ENSMUST00000223690 Clip1Q922J3 1391 aa13.97□□□□□ -0.17
Vti1a-202ENSMUST00000223690 Mier1Q5UAK0 511 aa13.97□□□□□ -0.17
Vti1a-202ENSMUST00000223690 Cc2d2aQ8CFW7 1633 aa13.97□□□□□ -0.17
Vti1a-202ENSMUST00000223690 Supt5hO55201 1082 aaKnown RBP13.94□□□□□ -0.18
Vti1a-202ENSMUST00000223690 Arid3aQ62431 601 aa13.94□□□□□ -0.18
Vti1a-202ENSMUST00000223690 Cux2P70298 1426 aa13.93□□□□□ -0.18
Vti1a-202ENSMUST00000223690 Lmod2Q3UHZ5 550 aa13.93□□□□□ -0.18
Vti1a-202ENSMUST00000223690 Myt1Q8CFC2 1127 aa13.91□□□□□ -0.18
Vti1a-202ENSMUST00000223690 Top2bQ64511 1612 aa13.9□□□□□ -0.18
Vti1a-202ENSMUST00000223690 NefmP08553 848 aa13.9□□□□□ -0.18
Vti1a-202ENSMUST00000223690 Cep162Q6ZQ06 1403 aa13.89□□□□□ -0.19
Vti1a-202ENSMUST00000223690 Wdr62Q3U3T8 1523 aa13.88□□□□□ -0.19
Vti1a-202ENSMUST00000223690 Rapgef2Q8CHG7 1496 aa13.86□□□□□ -0.19
Vti1a-202ENSMUST00000223690 Wdr66E9Q743 1299 aa13.85□□□□□ -0.19
Vti1a-202ENSMUST00000223690 Fam50aQ9WV03 339 aaKnown RBP13.83□□□□□ -0.19
Vti1a-202ENSMUST00000223690 Setd5Q5XJV7 1441 aa13.81□□□□□ -0.2
Vti1a-202ENSMUST00000223690 Dnajc5bQ9CQ94 199 aa13.8□□□□□ -0.2
Vti1a-202ENSMUST00000223690 Top2aQ01320 1528 aaKnown RBP13.79□□□□□ -0.2
Vti1a-202ENSMUST00000223690 CenpbP27790 599 aa13.77□□□□□ -0.21
Vti1a-202ENSMUST00000223690 Phf23Q8BSN5 401 aa13.77□□□□□ -0.21
Vti1a-202ENSMUST00000223690 LrpprcQ6PB66 1392 aaKnown RBP13.73□□□□□ -0.21
Vti1a-202ENSMUST00000223690 Eea1Q8BL66 1411 aa13.72□□□□□ -0.21
Vti1a-202ENSMUST00000223690 Prdm10Q3UTQ7 1184 aa13.72□□□□□ -0.21
Vti1a-202ENSMUST00000223690 Baz1bQ9Z277 1479 aa13.7□□□□□ -0.22
Vti1a-202ENSMUST00000223690 BlmO88700 1416 aa13.69□□□□□ -0.22
Vti1a-202ENSMUST00000223690 Dhx29Q6PGC1 1365 aaKnown RBP13.68□□□□□ -0.22
Vti1a-202ENSMUST00000223690 PtprkP35822 1457 aa13.68□□□□□ -0.22
Vti1a-202ENSMUST00000223690 Neurod1Q60867 357 aa13.66□□□□□ -0.22
Vti1a-202ENSMUST00000223690 Lamc3Q9R0B6 1581 aa13.65□□□□□ -0.22
Vti1a-202ENSMUST00000223690 Fkbp15Q6P9Q6 1216 aaKnown RBP13.64□□□□□ -0.23
Vti1a-202ENSMUST00000223690 Shroom4Q1W617 1475 aa13.62□□□□□ -0.23
Vti1a-202ENSMUST00000223690 Eid3Q3V124 375 aa13.61□□□□□ -0.23
Vti1a-202ENSMUST00000223690 Camsap1A2AHC3 1581 aa13.6□□□□□ -0.23
Vti1a-202ENSMUST00000223690 Grin2bQ01097 1482 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 103.9 ms