RNA–Protein interactions for RNA: ENSMUST00000218359.1

Ptprk-203, Transcript of Receptor-type tyrosine-protein phosphatase kappa, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ptprk, Length 4,669 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprk-203ENSMUST00000218359 Rhox8Q6VSS7 320 aa23.5■■□□□ 1.35
Ptprk-203ENSMUST00000218359 NischQ80TM9 1593 aa22.03■■□□□ 1.12
Ptprk-203ENSMUST00000218359 Ehmt2Q9Z148 1263 aaKnown RBP21.32■■□□□ 1
Ptprk-203ENSMUST00000218359 Ccdc136Q3TVA9 1136 aa21.11■□□□□ 0.97
Ptprk-203ENSMUST00000218359 Abcc9P70170 1546 aa21.1■□□□□ 0.97
Ptprk-203ENSMUST00000218359 Gm35339A0A140LHH9 1649 aa21■□□□□ 0.95
Ptprk-203ENSMUST00000218359 Abcc8B2RUS7 1588 aa20.73■□□□□ 0.91
Ptprk-203ENSMUST00000218359 Cngb1E1AZ71 1325 aa20.62■□□□□ 0.89
Ptprk-203ENSMUST00000218359 Rpgrip1Q9EPQ2 1331 aa20.6■□□□□ 0.89
Ptprk-203ENSMUST00000218359 Esf1Q3V1V3 845 aaKnown RBP20.59■□□□□ 0.89
Ptprk-203ENSMUST00000218359 Gab3Q8BSM5 595 aa20.56■□□□□ 0.88
Ptprk-203ENSMUST00000218359 Trim41Q5NCC3 630 aa20.34■□□□□ 0.85
Ptprk-203ENSMUST00000218359 Zeb1Q64318 1117 aa20.18■□□□□ 0.82
Ptprk-203ENSMUST00000218359 Wdr66E9Q743 1299 aa20.15■□□□□ 0.82
Ptprk-203ENSMUST00000218359 Myt1lP97500 1187 aa20.1■□□□□ 0.81
Ptprk-203ENSMUST00000218359 Npm2Q80W85 207 aa20.05■□□□□ 0.8
Ptprk-203ENSMUST00000218359 Ube2uB1AUC4 352 aa19.97■□□□□ 0.79
Ptprk-203ENSMUST00000218359 Las1lA2BE28 776 aaKnown RBP19.93■□□□□ 0.78
Ptprk-203ENSMUST00000218359 Rtl1Q7M732 1744 aa19.77■□□□□ 0.76
Ptprk-203ENSMUST00000218359 UbtfP25976 765 aaKnown RBP19.7■□□□□ 0.74
Ptprk-203ENSMUST00000218359 Acin1Q9JIX8 1338 aaKnown RBP19.64■□□□□ 0.73
Ptprk-203ENSMUST00000218359 Il27Q8K3I6 234 aa19.54■□□□□ 0.72
Ptprk-203ENSMUST00000218359 Ccdc180J3QNE4 1664 aa19.49■□□□□ 0.71
Ptprk-203ENSMUST00000218359 HrcG5E8J6 738 aa19.43■□□□□ 0.7
Ptprk-203ENSMUST00000218359 Dcaf1Q80TR8 1506 aa19.4■□□□□ 0.7
Ptprk-203ENSMUST00000218359 NacadQ5SWP3 1504 aa19.35■□□□□ 0.69
Ptprk-203ENSMUST00000218359 Zcchc6Q5BLK4 1491 aaKnown RBP19.34■□□□□ 0.69
Ptprk-203ENSMUST00000218359 NefmP08553 848 aa19.3■□□□□ 0.68
Ptprk-203ENSMUST00000218359 Rb1cc1Q9ESK9 1588 aa19.3■□□□□ 0.68
Ptprk-203ENSMUST00000218359 Ppargc1bQ8VHJ7 1014 aa19.22■□□□□ 0.67
Ptprk-203ENSMUST00000218359 Ap3b1Q9Z1T1 1105 aa19.2■□□□□ 0.66
Ptprk-203ENSMUST00000218359 Slc24a1Q91WD8 1130 aa19.2■□□□□ 0.66
Ptprk-203ENSMUST00000218359 Pcgf6Q99NA9 353 aa19.11■□□□□ 0.65
Ptprk-203ENSMUST00000218359 Kdm5dQ62240 1548 aa19.1■□□□□ 0.65
Ptprk-203ENSMUST00000218359 Baz1aO88379 1555 aa19.05■□□□□ 0.64
Ptprk-203ENSMUST00000218359 Fam50aQ9WV03 339 aaKnown RBP19.04■□□□□ 0.64
Ptprk-203ENSMUST00000218359 ScribQ80U72 1612 aa19.02■□□□□ 0.64
Ptprk-203ENSMUST00000218359 Neurod1Q60867 357 aa18.93■□□□□ 0.62
Ptprk-203ENSMUST00000218359 Supt5hO55201 1082 aaKnown RBP18.91■□□□□ 0.62
Ptprk-203ENSMUST00000218359 Pelp1Q9DBD5 1123 aaKnown RBP18.85■□□□□ 0.61
Ptprk-203ENSMUST00000218359 Cdk11bP24788 784 aaKnown RBP18.85■□□□□ 0.61
Ptprk-203ENSMUST00000218359 Mier1Q5UAK0 511 aa18.82■□□□□ 0.6
Ptprk-203ENSMUST00000218359 CenpbP27790 599 aa18.81■□□□□ 0.6
Ptprk-203ENSMUST00000218359 NclP09405 707 aaKnown RBP18.79■□□□□ 0.6
Ptprk-203ENSMUST00000218359 Brd4Q9ESU6 1400 aaKnown RBP18.75■□□□□ 0.59
Ptprk-203ENSMUST00000218359 Plekhg3Q4VAC9 1341 aa18.74■□□□□ 0.59
Ptprk-203ENSMUST00000218359 Crybg2B7ZCC2 1516 aa18.73■□□□□ 0.59
Ptprk-203ENSMUST00000218359 Nop58Q6DFW4 536 aaKnown RBP18.73■□□□□ 0.59
Ptprk-203ENSMUST00000218359 Lmod2Q3UHZ5 550 aa18.72■□□□□ 0.59
Ptprk-203ENSMUST00000218359 Sycp2Q9CUU3 1500 aa18.7■□□□□ 0.58
Ptprk-203ENSMUST00000218359 Stra8P70278 393 aa18.69■□□□□ 0.58
Ptprk-203ENSMUST00000218359 Chic1Q8CBW7 227 aa18.64■□□□□ 0.57
Ptprk-203ENSMUST00000218359 TonslQ6NZL6 1363 aa18.62■□□□□ 0.57
Ptprk-203ENSMUST00000218359 Zbtb7cQ8VCZ7 619 aa18.57■□□□□ 0.56
Ptprk-203ENSMUST00000218359 Npm1Q61937 292 aaKnown RBP18.56■□□□□ 0.56
Ptprk-203ENSMUST00000218359 Eif5bQ05D44 1216 aaKnown RBP18.56■□□□□ 0.56
Ptprk-203ENSMUST00000218359 Eid3Q3V124 375 aa18.52■□□□□ 0.56
Ptprk-203ENSMUST00000218359 NrdcQ8BHG1 1161 aa18.51■□□□□ 0.55
Ptprk-203ENSMUST00000218359 Mapk8ip2Q9ERE9 830 aa18.49■□□□□ 0.55
Ptprk-203ENSMUST00000218359 Os9Q8K2C7 672 aa18.45■□□□□ 0.54
Ptprk-203ENSMUST00000218359 Amer1Q7TS75 1132 aa18.34■□□□□ 0.53
Ptprk-203ENSMUST00000218359 Zbtb4Q5F293 982 aa18.34■□□□□ 0.53
Ptprk-203ENSMUST00000218359 Ifnlr1Q8CGK5 535 aa18.34■□□□□ 0.53
Ptprk-203ENSMUST00000218359 Smarca2Q6DIC0 1577 aa18.33■□□□□ 0.52
Ptprk-203ENSMUST00000218359 Ttbk1Q6PCN3 1308 aa18.32■□□□□ 0.52
Ptprk-203ENSMUST00000218359 Anp32bQ9EST5 272 aaKnown RBP18.32■□□□□ 0.52
Ptprk-203ENSMUST00000218359 Hnrnpul2Q00PI9 745 aaKnown RBP18.3■□□□□ 0.52
Ptprk-203ENSMUST00000218359 Sall2Q9QX96 1004 aa18.28■□□□□ 0.52
Ptprk-203ENSMUST00000218359 Fkbp15Q6P9Q6 1216 aaKnown RBP18.25■□□□□ 0.51
Ptprk-203ENSMUST00000218359 Cep164Q5DU05 1446 aa18.25■□□□□ 0.51
Ptprk-203ENSMUST00000218359 Tnnt3Q9QZ47 272 aa18.25■□□□□ 0.51
Ptprk-203ENSMUST00000218359 Clip1Q922J3 1391 aa18.23■□□□□ 0.51
Ptprk-203ENSMUST00000218359 ClspnQ80YR7 1315 aa18.21■□□□□ 0.5
Ptprk-203ENSMUST00000218359 Golga3P55937 1487 aa18.19■□□□□ 0.5
Ptprk-203ENSMUST00000218359 Pds5bQ4VA53 1446 aaKnown RBP18.18■□□□□ 0.5
Ptprk-203ENSMUST00000218359 Gm38655A0A286YDK6 273 aa18.16■□□□□ 0.5
Ptprk-203ENSMUST00000218359 NeflP08551 543 aa18.13■□□□□ 0.49
Ptprk-203ENSMUST00000218359 Prdm10Q3UTQ7 1184 aa18.1■□□□□ 0.49
Ptprk-203ENSMUST00000218359 Ubl4bQ9CQ84 188 aa18.1■□□□□ 0.49
Ptprk-203ENSMUST00000218359 Erich6D3Z6S9 713 aa18.06■□□□□ 0.48
Ptprk-203ENSMUST00000218359 Ercc6F8VPZ5 1481 aa18.05■□□□□ 0.48
Ptprk-203ENSMUST00000218359 Chic2Q9D9G3 165 aa18.03■□□□□ 0.48
Ptprk-203ENSMUST00000218359 Cecr2E9Q2Z1 1453 aa18.03■□□□□ 0.48
Ptprk-203ENSMUST00000218359 CftrP26361 1476 aa17.99■□□□□ 0.47
Ptprk-203ENSMUST00000218359 4933416C03RikQ3V063 378 aa17.97■□□□□ 0.47
Ptprk-203ENSMUST00000218359 Atad2bE9Q166 1460 aaKnown RBP17.97■□□□□ 0.47
Ptprk-203ENSMUST00000218359 Smarca4Q3TKT4 1613 aaKnown RBP17.96■□□□□ 0.47
Ptprk-203ENSMUST00000218359 Csrnp3P59055 597 aa17.92■□□□□ 0.46
Ptprk-203ENSMUST00000218359 Rsf1E9PWW9 1441 aaKnown RBP17.91■□□□□ 0.46
Ptprk-203ENSMUST00000218359 Gm13697A2AK42 830 aa17.89■□□□□ 0.45
Ptprk-203ENSMUST00000218359 Atp1b4Q99ME6 356 aa17.88■□□□□ 0.45
Ptprk-203ENSMUST00000218359 BlmO88700 1416 aa17.87■□□□□ 0.45
Ptprk-203ENSMUST00000218359 Synj1Q8CHC4 1574 aa17.87■□□□□ 0.45
Ptprk-203ENSMUST00000218359 Cttnbp2B9EJA2 1648 aa17.84■□□□□ 0.45
Ptprk-203ENSMUST00000218359 BicraF8VPZ9 1578 aa17.84■□□□□ 0.45
Ptprk-203ENSMUST00000218359 Aebp2Q9Z248 504 aaKnown RBP17.84■□□□□ 0.45
Ptprk-203ENSMUST00000218359 Plppr3Q7TPB0 716 aa17.83■□□□□ 0.44
Ptprk-203ENSMUST00000218359 Kif15Q6P9L6 1387 aa17.78■□□□□ 0.44
Ptprk-203ENSMUST00000218359 Setd5Q5XJV7 1441 aa17.78■□□□□ 0.44
Ptprk-203ENSMUST00000218359 Fmn1Q05860 1466 aa17.77■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms