RNA–Protein interactions for RNA: ENSMUST00000209423.1

Chd9-205, Transcript of Chromodomain-helicase-DNA-binding protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chd9, Length 9,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9-205ENSMUST00000209423 Rpgrip1Q9EPQ2 1331 aa12.15□□□□□ -0.46
Chd9-205ENSMUST00000209423 Rtl1Q7M732 1744 aa11.86□□□□□ -0.51
Chd9-205ENSMUST00000209423 Cngb1E1AZ71 1325 aa11.65□□□□□ -0.54
Chd9-205ENSMUST00000209423 Rhox8Q6VSS7 320 aa11.42□□□□□ -0.58
Chd9-205ENSMUST00000209423 Ccdc180J3QNE4 1664 aa11.41□□□□□ -0.58
Chd9-205ENSMUST00000209423 Las1lA2BE28 776 aaKnown RBP11.4□□□□□ -0.58
Chd9-205ENSMUST00000209423 NischQ80TM9 1593 aa11.1□□□□□ -0.63
Chd9-205ENSMUST00000209423 Pelp1Q9DBD5 1123 aaKnown RBP11.04□□□□□ -0.64
Chd9-205ENSMUST00000209423 Myt1Q8CFC2 1127 aa11.03□□□□□ -0.64
Chd9-205ENSMUST00000209423 Wdr66E9Q743 1299 aa10.98□□□□□ -0.65
Chd9-205ENSMUST00000209423 Acin1Q9JIX8 1338 aaKnown RBP10.82□□□□□ -0.68
Chd9-205ENSMUST00000209423 NefmP08553 848 aa10.64□□□□□ -0.71
Chd9-205ENSMUST00000209423 CenpbP27790 599 aa10.63□□□□□ -0.71
Chd9-205ENSMUST00000209423 Stra8P70278 393 aa10.58□□□□□ -0.72
Chd9-205ENSMUST00000209423 Abcc9P70170 1546 aa10.56□□□□□ -0.72
Chd9-205ENSMUST00000209423 HrcG5E8J6 738 aa10.55□□□□□ -0.72
Chd9-205ENSMUST00000209423 Gm35339A0A140LHH9 1649 aa10.49□□□□□ -0.73
Chd9-205ENSMUST00000209423 Trim41Q5NCC3 630 aa10.47□□□□□ -0.73
Chd9-205ENSMUST00000209423 Rtl5Q5DTT4 599 aa10.4□□□□□ -0.74
Chd9-205ENSMUST00000209423 Tnnt3Q9QZ47 272 aa10.36□□□□□ -0.75
Chd9-205ENSMUST00000209423 Dcaf1Q80TR8 1506 aa10.32□□□□□ -0.76
Chd9-205ENSMUST00000209423 Ehmt2Q9Z148 1263 aaKnown RBP10.27□□□□□ -0.77
Chd9-205ENSMUST00000209423 Pcgf6Q99NA9 353 aa10.26□□□□□ -0.77
Chd9-205ENSMUST00000209423 Neurod1Q60867 357 aa10.22□□□□□ -0.77
Chd9-205ENSMUST00000209423 Zeb1Q64318 1117 aa10.22□□□□□ -0.77
Chd9-205ENSMUST00000209423 Cdk11bP24788 784 aaKnown RBP10.17□□□□□ -0.78
Chd9-205ENSMUST00000209423 Amer1Q7TS75 1132 aa10.15□□□□□ -0.78
Chd9-205ENSMUST00000209423 Abcc8B2RUS7 1588 aa10.11□□□□□ -0.79
Chd9-205ENSMUST00000209423 Hdac5Q9Z2V6 1113 aa10.1□□□□□ -0.79
Chd9-205ENSMUST00000209423 Ccdc136Q3TVA9 1136 aa10.07□□□□□ -0.8
Chd9-205ENSMUST00000209423 4930567H17RikQ3V0K5 233 aa10.05□□□□□ -0.8
Chd9-205ENSMUST00000209423 Ccdc9Q8VC31 543 aaKnown RBP10□□□□□ -0.81
Chd9-205ENSMUST00000209423 Esf1Q3V1V3 845 aaKnown RBP9.99□□□□□ -0.81
Chd9-205ENSMUST00000209423 Nop58Q6DFW4 536 aaKnown RBP9.99□□□□□ -0.81
Chd9-205ENSMUST00000209423 Eif5bQ05D44 1216 aaKnown RBP9.98□□□□□ -0.81
Chd9-205ENSMUST00000209423 Cep164Q5DU05 1446 aa9.98□□□□□ -0.81
Chd9-205ENSMUST00000209423 DiexfQ8BTT6 772 aaKnown RBP9.97□□□□□ -0.81
Chd9-205ENSMUST00000209423 Anp32bQ9EST5 272 aaKnown RBP9.96□□□□□ -0.82
Chd9-205ENSMUST00000209423 Aplp2Q06335 707 aa9.94□□□□□ -0.82
Chd9-205ENSMUST00000209423 ClspnQ80YR7 1315 aa9.94□□□□□ -0.82
Chd9-205ENSMUST00000209423 Anks4bQ8K3X6 423 aa9.92□□□□□ -0.82
Chd9-205ENSMUST00000209423 Ube2uB1AUC4 352 aa9.88□□□□□ -0.83
Chd9-205ENSMUST00000209423 Npm2Q80W85 207 aa9.88□□□□□ -0.83
Chd9-205ENSMUST00000209423 Rb1cc1Q9ESK9 1588 aa9.87□□□□□ -0.83
Chd9-205ENSMUST00000209423 Anp32aO35381 247 aa9.87□□□□□ -0.83
Chd9-205ENSMUST00000209423 NeflP08551 543 aa9.84□□□□□ -0.83
Chd9-205ENSMUST00000209423 TonslQ6NZL6 1363 aa9.83□□□□□ -0.84
Chd9-205ENSMUST00000209423 Supt5hO55201 1082 aaKnown RBP9.82□□□□□ -0.84
Chd9-205ENSMUST00000209423 Brd4Q9ESU6 1400 aaKnown RBP9.8□□□□□ -0.84
Chd9-205ENSMUST00000209423 Ttbk1Q6PCN3 1308 aa9.8□□□□□ -0.84
Chd9-205ENSMUST00000209423 Gab3Q8BSM5 595 aa9.79□□□□□ -0.84
Chd9-205ENSMUST00000209423 Zcchc6Q5BLK4 1491 aaKnown RBP9.76□□□□□ -0.85
Chd9-205ENSMUST00000209423 NrdcQ8BHG1 1161 aa9.76□□□□□ -0.85
Chd9-205ENSMUST00000209423 UbtfP25976 765 aaKnown RBP9.73□□□□□ -0.85
Chd9-205ENSMUST00000209423 Baz1aO88379 1555 aa9.72□□□□□ -0.85
Chd9-205ENSMUST00000209423 4933416C03RikQ3V063 378 aa9.68□□□□□ -0.86
Chd9-205ENSMUST00000209423 Myt1lP97500 1187 aa9.66□□□□□ -0.86
Chd9-205ENSMUST00000209423 Ccer2J3QPU5 274 aa9.66□□□□□ -0.86
Chd9-205ENSMUST00000209423 Mier1Q5UAK0 511 aa9.63□□□□□ -0.87
Chd9-205ENSMUST00000209423 Arid4bA2CG63 1314 aaKnown RBP9.63□□□□□ -0.87
Chd9-205ENSMUST00000209423 NclP09405 707 aaKnown RBP9.62□□□□□ -0.87
Chd9-205ENSMUST00000209423 Upf2A2AT37 1269 aaKnown RBP9.6□□□□□ -0.87
Chd9-205ENSMUST00000209423 Zfp777B9EKF4 885 aa9.56□□□□□ -0.88
Chd9-205ENSMUST00000209423 Slc24a1Q91WD8 1130 aa9.55□□□□□ -0.88
Chd9-205ENSMUST00000209423 Ythdc1E9Q5K9 736 aaKnown RBP9.51□□□□□ -0.89
Chd9-205ENSMUST00000209423 NacadQ5SWP3 1504 aa9.5□□□□□ -0.89
Chd9-205ENSMUST00000209423 Crybg2B7ZCC2 1516 aa9.49□□□□□ -0.89
Chd9-205ENSMUST00000209423 Hoxa7P02830 229 aa9.48□□□□□ -0.89
Chd9-205ENSMUST00000209423 Eea1Q8BL66 1411 aa9.46□□□□□ -0.89
Chd9-205ENSMUST00000209423 Csrnp3P59055 597 aa9.45□□□□□ -0.9
Chd9-205ENSMUST00000209423 Ccdc27Q3V036 639 aa9.43□□□□□ -0.9
Chd9-205ENSMUST00000209423 Golga3P55937 1487 aa9.42□□□□□ -0.9
Chd9-205ENSMUST00000209423 Hsp90aa1P07901 733 aaKnown RBP9.42□□□□□ -0.9
Chd9-205ENSMUST00000209423 Calr4Q3TQS0 420 aa9.41□□□□□ -0.9
Chd9-205ENSMUST00000209423 1700123L14RikQ3V2K7 440 aa9.41□□□□□ -0.9
Chd9-205ENSMUST00000209423 Sall2Q9QX96 1004 aa9.41□□□□□ -0.9
Chd9-205ENSMUST00000209423 Wdr43Q6ZQL4 677 aaKnown RBP9.4□□□□□ -0.9
Chd9-205ENSMUST00000209423 Fam50aQ9WV03 339 aaKnown RBP9.39□□□□□ -0.91
Chd9-205ENSMUST00000209423 Clip1Q922J3 1391 aa9.38□□□□□ -0.91
Chd9-205ENSMUST00000209423 DaxxO35613 739 aa9.38□□□□□ -0.91
Chd9-205ENSMUST00000209423 Smarca2Q6DIC0 1577 aa9.36□□□□□ -0.91
Chd9-205ENSMUST00000209423 Mia2Q91ZV0 1396 aa9.33□□□□□ -0.92
Chd9-205ENSMUST00000209423 Chmp4bQ9D8B3 224 aaKnown RBP9.33□□□□□ -0.92
Chd9-205ENSMUST00000209423 4933402E13RikQ9D4D2 429 aa9.32□□□□□ -0.92
Chd9-205ENSMUST00000209423 Adam1bQ8R534 806 aa9.31□□□□□ -0.92
Chd9-205ENSMUST00000209423 Htatsf1Q8BGC0 757 aa9.31□□□□□ -0.92
Chd9-205ENSMUST00000209423 Mbd3Q9Z2D8 285 aaKnown RBP9.31□□□□□ -0.92
Chd9-205ENSMUST00000209423 Bcl11aQ9QYE3 773 aa9.3□□□□□ -0.92
Chd9-205ENSMUST00000209423 Fkbp15Q6P9Q6 1216 aaKnown RBP9.3□□□□□ -0.92
Chd9-205ENSMUST00000209423 Irx3P81067 507 aa9.28□□□□□ -0.92
Chd9-205ENSMUST00000209423 PtmsQ9D0J8 101 aaKnown RBP9.27□□□□□ -0.93
Chd9-205ENSMUST00000209423 Clstn2Q9ER65 966 aa9.26□□□□□ -0.93
Chd9-205ENSMUST00000209423 Baz1bQ9Z277 1479 aa9.24□□□□□ -0.93
Chd9-205ENSMUST00000209423 Kdm5dQ62240 1548 aa9.24□□□□□ -0.93
Chd9-205ENSMUST00000209423 Cttnbp2B9EJA2 1648 aa9.24□□□□□ -0.93
Chd9-205ENSMUST00000209423 Ppm1gQ61074 542 aa9.23□□□□□ -0.93
Chd9-205ENSMUST00000209423 AampJ3QN89 436 aa9.23□□□□□ -0.93
Chd9-205ENSMUST00000209423 Ccdc18Q640L5 1455 aa9.23□□□□□ -0.93
Chd9-205ENSMUST00000209423 Fmn1Q05860 1466 aa9.22□□□□□ -0.93
Chd9-205ENSMUST00000209423 Ppp4r2Q0VGB7 417 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms