RNA–Protein interactions for RNA: ENSMUST00000197859.4

Ube2d3-212, Transcript of Ubiquitin-conjugating enzyme E2 D3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ube2d3, Length 3,833 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3-212ENSMUST00000197859 Rhox8Q6VSS7 320 aa27.05■■□□□ 1.92
Ube2d3-212ENSMUST00000197859 NischQ80TM9 1593 aa25.88■■□□□ 1.73
Ube2d3-212ENSMUST00000197859 Rpgrip1Q9EPQ2 1331 aa25.82■■□□□ 1.72
Ube2d3-212ENSMUST00000197859 Ehmt2Q9Z148 1263 aaKnown RBP25.76■■□□□ 1.71
Ube2d3-212ENSMUST00000197859 Acin1Q9JIX8 1338 aaKnown RBP25■■□□□ 1.59
Ube2d3-212ENSMUST00000197859 Ccdc136Q3TVA9 1136 aa24.74■■□□□ 1.55
Ube2d3-212ENSMUST00000197859 Abcc9P70170 1546 aa24.68■■□□□ 1.54
Ube2d3-212ENSMUST00000197859 Ccdc180J3QNE4 1664 aa24.68■■□□□ 1.54
Ube2d3-212ENSMUST00000197859 Pcgf6Q99NA9 353 aa24.63■■□□□ 1.53
Ube2d3-212ENSMUST00000197859 Rtl1Q7M732 1744 aa24.49■■□□□ 1.51
Ube2d3-212ENSMUST00000197859 Zeb1Q64318 1117 aa24.3■■□□□ 1.48
Ube2d3-212ENSMUST00000197859 Gm35339A0A140LHH9 1649 aa24.25■■□□□ 1.47
Ube2d3-212ENSMUST00000197859 Trim41Q5NCC3 630 aa24.25■■□□□ 1.47
Ube2d3-212ENSMUST00000197859 Supt5hO55201 1082 aaKnown RBP24.12■■□□□ 1.45
Ube2d3-212ENSMUST00000197859 HrcG5E8J6 738 aa24.1■■□□□ 1.45
Ube2d3-212ENSMUST00000197859 Abcc8B2RUS7 1588 aa24.02■■□□□ 1.44
Ube2d3-212ENSMUST00000197859 Gab3Q8BSM5 595 aa23.98■■□□□ 1.43
Ube2d3-212ENSMUST00000197859 Las1lA2BE28 776 aaKnown RBP23.97■■□□□ 1.43
Ube2d3-212ENSMUST00000197859 Wdr66E9Q743 1299 aa23.77■■□□□ 1.4
Ube2d3-212ENSMUST00000197859 Cngb1E1AZ71 1325 aa23.74■■□□□ 1.39
Ube2d3-212ENSMUST00000197859 Neurod1Q60867 357 aa23.68■■□□□ 1.38
Ube2d3-212ENSMUST00000197859 Dcaf1Q80TR8 1506 aa23.58■■□□□ 1.36
Ube2d3-212ENSMUST00000197859 NefmP08553 848 aa23.48■■□□□ 1.35
Ube2d3-212ENSMUST00000197859 Zcchc6Q5BLK4 1491 aaKnown RBP23.38■■□□□ 1.33
Ube2d3-212ENSMUST00000197859 Ppargc1bQ8VHJ7 1014 aa23.35■■□□□ 1.33
Ube2d3-212ENSMUST00000197859 UbtfP25976 765 aaKnown RBP23.28■■□□□ 1.32
Ube2d3-212ENSMUST00000197859 Mier1Q5UAK0 511 aa23.25■■□□□ 1.31
Ube2d3-212ENSMUST00000197859 Sall2Q9QX96 1004 aa23.22■■□□□ 1.31
Ube2d3-212ENSMUST00000197859 Esf1Q3V1V3 845 aaKnown RBP23.18■■□□□ 1.3
Ube2d3-212ENSMUST00000197859 CenpbP27790 599 aa23.11■■□□□ 1.29
Ube2d3-212ENSMUST00000197859 Cdk11bP24788 784 aaKnown RBP23.11■■□□□ 1.29
Ube2d3-212ENSMUST00000197859 Csrnp3P59055 597 aa23.1■■□□□ 1.29
Ube2d3-212ENSMUST00000197859 Myt1lP97500 1187 aa23.05■■□□□ 1.28
Ube2d3-212ENSMUST00000197859 Nop58Q6DFW4 536 aaKnown RBP23.03■■□□□ 1.28
Ube2d3-212ENSMUST00000197859 Gm38655A0A286YDK6 273 aa22.94■■□□□ 1.26
Ube2d3-212ENSMUST00000197859 1700123L14RikQ3V2K7 440 aa22.93■■□□□ 1.26
Ube2d3-212ENSMUST00000197859 Chic1Q8CBW7 227 aa22.92■■□□□ 1.26
Ube2d3-212ENSMUST00000197859 Anks4bQ8K3X6 423 aa22.89■■□□□ 1.25
Ube2d3-212ENSMUST00000197859 Cep164Q5DU05 1446 aa22.88■■□□□ 1.25
Ube2d3-212ENSMUST00000197859 Rb1cc1Q9ESK9 1588 aa22.74■■□□□ 1.23
Ube2d3-212ENSMUST00000197859 Npm2Q80W85 207 aa22.73■■□□□ 1.23
Ube2d3-212ENSMUST00000197859 Aebp2Q9Z248 504 aaKnown RBP22.66■■□□□ 1.22
Ube2d3-212ENSMUST00000197859 ClspnQ80YR7 1315 aa22.61■■□□□ 1.21
Ube2d3-212ENSMUST00000197859 Myt1Q8CFC2 1127 aa22.59■■□□□ 1.21
Ube2d3-212ENSMUST00000197859 TonslQ6NZL6 1363 aa22.56■■□□□ 1.2
Ube2d3-212ENSMUST00000197859 Aplp2Q06335 707 aa22.5■■□□□ 1.19
Ube2d3-212ENSMUST00000197859 Rsf1E9PWW9 1441 aaKnown RBP22.37■■□□□ 1.17
Ube2d3-212ENSMUST00000197859 Slc24a1Q91WD8 1130 aa22.34■■□□□ 1.17
Ube2d3-212ENSMUST00000197859 Plekhg3Q4VAC9 1341 aa22.34■■□□□ 1.17
Ube2d3-212ENSMUST00000197859 Mapk8ip2Q9ERE9 830 aa22.33■■□□□ 1.16
Ube2d3-212ENSMUST00000197859 Baz1aO88379 1555 aa22.31■■□□□ 1.16
Ube2d3-212ENSMUST00000197859 Eid3Q3V124 375 aa22.27■■□□□ 1.16
Ube2d3-212ENSMUST00000197859 Ap3b1Q9Z1T1 1105 aa22.25■■□□□ 1.15
Ube2d3-212ENSMUST00000197859 ScribQ80U72 1612 aa22.24■■□□□ 1.15
Ube2d3-212ENSMUST00000197859 DiexfQ8BTT6 772 aaKnown RBP22.24■■□□□ 1.15
Ube2d3-212ENSMUST00000197859 Ube2uB1AUC4 352 aa22.22■■□□□ 1.15
Ube2d3-212ENSMUST00000197859 Tnnt3Q9QZ47 272 aa22.22■■□□□ 1.15
Ube2d3-212ENSMUST00000197859 Pelp1Q9DBD5 1123 aaKnown RBP22.15■■□□□ 1.14
Ube2d3-212ENSMUST00000197859 NclP09405 707 aaKnown RBP22.1■■□□□ 1.13
Ube2d3-212ENSMUST00000197859 Ccdc88bQ4QRL3 1481 aa22.09■■□□□ 1.13
Ube2d3-212ENSMUST00000197859 Stra8P70278 393 aa22.08■■□□□ 1.13
Ube2d3-212ENSMUST00000197859 Brd4Q9ESU6 1400 aaKnown RBP22.07■■□□□ 1.12
Ube2d3-212ENSMUST00000197859 Fam71e1A1L3C1 212 aa22.07■■□□□ 1.12
Ube2d3-212ENSMUST00000197859 SafbD3YXK2 937 aaKnown RBP22.05■■□□□ 1.12
Ube2d3-212ENSMUST00000197859 Fam50aQ9WV03 339 aaKnown RBP22.03■■□□□ 1.12
Ube2d3-212ENSMUST00000197859 Ttbk1Q6PCN3 1308 aa22.01■■□□□ 1.11
Ube2d3-212ENSMUST00000197859 Il27Q8K3I6 234 aa22■■□□□ 1.11
Ube2d3-212ENSMUST00000197859 Kdm5dQ62240 1548 aa21.97■■□□□ 1.11
Ube2d3-212ENSMUST00000197859 Hnrnpul2Q00PI9 745 aaKnown RBP21.97■■□□□ 1.11
Ube2d3-212ENSMUST00000197859 Eif5bQ05D44 1216 aaKnown RBP21.92■■□□□ 1.1
Ube2d3-212ENSMUST00000197859 Golga3P55937 1487 aa21.91■■□□□ 1.1
Ube2d3-212ENSMUST00000197859 Clip1Q922J3 1391 aa21.91■■□□□ 1.1
Ube2d3-212ENSMUST00000197859 Anp32aO35381 247 aa21.87■■□□□ 1.09
Ube2d3-212ENSMUST00000197859 NacadQ5SWP3 1504 aa21.81■■□□□ 1.08
Ube2d3-212ENSMUST00000197859 Bcl11aQ9QYE3 773 aa21.74■■□□□ 1.07
Ube2d3-212ENSMUST00000197859 Lmod2Q3UHZ5 550 aa21.7■■□□□ 1.06
Ube2d3-212ENSMUST00000197859 Calr4Q3TQS0 420 aa21.66■■□□□ 1.06
Ube2d3-212ENSMUST00000197859 Smarca2Q6DIC0 1577 aa21.63■■□□□ 1.05
Ube2d3-212ENSMUST00000197859 Amer1Q7TS75 1132 aa21.58■■□□□ 1.04
Ube2d3-212ENSMUST00000197859 Ppp4r2Q0VGB7 417 aa21.54■■□□□ 1.04
Ube2d3-212ENSMUST00000197859 Rtl5Q5DTT4 599 aa21.54■■□□□ 1.04
Ube2d3-212ENSMUST00000197859 NrdcQ8BHG1 1161 aa21.53■■□□□ 1.04
Ube2d3-212ENSMUST00000197859 Cecr2E9Q2Z1 1453 aa21.5■■□□□ 1.03
Ube2d3-212ENSMUST00000197859 Cep162Q6ZQ06 1403 aa21.43■■□□□ 1.02
Ube2d3-212ENSMUST00000197859 Wdr43Q6ZQL4 677 aaKnown RBP21.35■■□□□ 1.01
Ube2d3-212ENSMUST00000197859 P3h3Q8CG70 732 aa21.34■■□□□ 1.01
Ube2d3-212ENSMUST00000197859 BlmO88700 1416 aa21.32■■□□□ 1
Ube2d3-212ENSMUST00000197859 Crybg2B7ZCC2 1516 aa21.31■■□□□ 1
Ube2d3-212ENSMUST00000197859 Setd5Q5XJV7 1441 aa21.31■■□□□ 1
Ube2d3-212ENSMUST00000197859 4933416C03RikQ3V063 378 aa21.3■■□□□ 1
Ube2d3-212ENSMUST00000197859 Synj1Q8CHC4 1574 aa21.29■■□□□ 1
Ube2d3-212ENSMUST00000197859 Nolc1E9Q5C9 702 aaKnown RBP21.29■■□□□ 1
Ube2d3-212ENSMUST00000197859 Rapgef2Q8CHG7 1496 aa21.28■■□□□ 1
Ube2d3-212ENSMUST00000197859 Mrs2Q5NCE8 434 aa21.27■■□□□ 1
Ube2d3-212ENSMUST00000197859 Ifnlr1Q8CGK5 535 aa21.27■■□□□ 1
Ube2d3-212ENSMUST00000197859 Hspa5P20029 655 aaKnown RBP21.23■□□□□ 0.99
Ube2d3-212ENSMUST00000197859 CftrP26361 1476 aa21.21■□□□□ 0.99
Ube2d3-212ENSMUST00000197859 Supt16hQ920B9 1047 aa21.19■□□□□ 0.98
Ube2d3-212ENSMUST00000197859 Eea1Q8BL66 1411 aa21.18■□□□□ 0.98
Ube2d3-212ENSMUST00000197859 Sin3aQ60520 1274 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms