RNA–Protein interactions for RNA: ENSMUST00000196060.4

Cspg5-202, Transcript of Chondroitin sulfate proteoglycan 5, mousemouse

TSL 1 (best) BASIC

Gene Cspg5, Length 3,790 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5-202ENSMUST00000196060 Rhox8Q6VSS7 320 aa31.17■■■□□ 2.58
Cspg5-202ENSMUST00000196060 NischQ80TM9 1593 aa30.47■■■□□ 2.47
Cspg5-202ENSMUST00000196060 Ehmt2Q9Z148 1263 aaKnown RBP29.19■■■□□ 2.26
Cspg5-202ENSMUST00000196060 Abcc9P70170 1546 aa29.08■■■□□ 2.25
Cspg5-202ENSMUST00000196060 Ccdc136Q3TVA9 1136 aa28.66■■■□□ 2.18
Cspg5-202ENSMUST00000196060 Abcc8B2RUS7 1588 aa28.43■■■□□ 2.14
Cspg5-202ENSMUST00000196060 Rpgrip1Q9EPQ2 1331 aa28.41■■■□□ 2.14
Cspg5-202ENSMUST00000196060 Gm35339A0A140LHH9 1649 aa28.2■■■□□ 2.1
Cspg5-202ENSMUST00000196060 Ccdc180J3QNE4 1664 aa28.1■■■□□ 2.09
Cspg5-202ENSMUST00000196060 Rtl1Q7M732 1744 aa27.95■■■□□ 2.06
Cspg5-202ENSMUST00000196060 Acin1Q9JIX8 1338 aaKnown RBP27.91■■■□□ 2.06
Cspg5-202ENSMUST00000196060 Trim41Q5NCC3 630 aa27.8■■■□□ 2.04
Cspg5-202ENSMUST00000196060 Gab3Q8BSM5 595 aa27.57■■■□□ 2
Cspg5-202ENSMUST00000196060 Cngb1E1AZ71 1325 aa27.45■■□□□ 1.99
Cspg5-202ENSMUST00000196060 HrcG5E8J6 738 aa27.44■■□□□ 1.98
Cspg5-202ENSMUST00000196060 Pcgf6Q99NA9 353 aa27.33■■□□□ 1.97
Cspg5-202ENSMUST00000196060 Zeb1Q64318 1117 aa27.3■■□□□ 1.96
Cspg5-202ENSMUST00000196060 Zcchc6Q5BLK4 1491 aaKnown RBP27.02■■□□□ 1.92
Cspg5-202ENSMUST00000196060 Supt5hO55201 1082 aaKnown RBP26.96■■□□□ 1.91
Cspg5-202ENSMUST00000196060 Esf1Q3V1V3 845 aaKnown RBP26.94■■□□□ 1.9
Cspg5-202ENSMUST00000196060 Dcaf1Q80TR8 1506 aa26.78■■□□□ 1.88
Cspg5-202ENSMUST00000196060 Rb1cc1Q9ESK9 1588 aa26.74■■□□□ 1.87
Cspg5-202ENSMUST00000196060 Wdr66E9Q743 1299 aa26.67■■□□□ 1.86
Cspg5-202ENSMUST00000196060 Chic1Q8CBW7 227 aa26.56■■□□□ 1.84
Cspg5-202ENSMUST00000196060 UbtfP25976 765 aaKnown RBP26.56■■□□□ 1.84
Cspg5-202ENSMUST00000196060 Myt1lP97500 1187 aa26.56■■□□□ 1.84
Cspg5-202ENSMUST00000196060 Ppargc1bQ8VHJ7 1014 aa26.46■■□□□ 1.83
Cspg5-202ENSMUST00000196060 Mier1Q5UAK0 511 aa26.39■■□□□ 1.81
Cspg5-202ENSMUST00000196060 NefmP08553 848 aa26.32■■□□□ 1.8
Cspg5-202ENSMUST00000196060 Las1lA2BE28 776 aaKnown RBP26.3■■□□□ 1.8
Cspg5-202ENSMUST00000196060 Cep164Q5DU05 1446 aa26.25■■□□□ 1.79
Cspg5-202ENSMUST00000196060 Neurod1Q60867 357 aa26.25■■□□□ 1.79
Cspg5-202ENSMUST00000196060 Npm2Q80W85 207 aa26.22■■□□□ 1.79
Cspg5-202ENSMUST00000196060 Baz1aO88379 1555 aa26.2■■□□□ 1.78
Cspg5-202ENSMUST00000196060 Kdm5dQ62240 1548 aa26.12■■□□□ 1.77
Cspg5-202ENSMUST00000196060 Sall2Q9QX96 1004 aa26.08■■□□□ 1.77
Cspg5-202ENSMUST00000196060 ScribQ80U72 1612 aa26.06■■□□□ 1.76
Cspg5-202ENSMUST00000196060 Rsf1E9PWW9 1441 aaKnown RBP25.95■■□□□ 1.74
Cspg5-202ENSMUST00000196060 NacadQ5SWP3 1504 aa25.88■■□□□ 1.73
Cspg5-202ENSMUST00000196060 Il27Q8K3I6 234 aa25.73■■□□□ 1.71
Cspg5-202ENSMUST00000196060 Ap3b1Q9Z1T1 1105 aa25.73■■□□□ 1.71
Cspg5-202ENSMUST00000196060 Brd4Q9ESU6 1400 aaKnown RBP25.73■■□□□ 1.71
Cspg5-202ENSMUST00000196060 Plekhg3Q4VAC9 1341 aa25.72■■□□□ 1.71
Cspg5-202ENSMUST00000196060 Ccdc88bQ4QRL3 1481 aa25.7■■□□□ 1.71
Cspg5-202ENSMUST00000196060 Cdk11bP24788 784 aaKnown RBP25.7■■□□□ 1.71
Cspg5-202ENSMUST00000196060 Nop58Q6DFW4 536 aaKnown RBP25.69■■□□□ 1.7
Cspg5-202ENSMUST00000196060 Aebp2Q9Z248 504 aaKnown RBP25.64■■□□□ 1.69
Cspg5-202ENSMUST00000196060 Csrnp3P59055 597 aa25.6■■□□□ 1.69
Cspg5-202ENSMUST00000196060 Gm38655A0A286YDK6 273 aa25.57■■□□□ 1.68
Cspg5-202ENSMUST00000196060 TonslQ6NZL6 1363 aa25.49■■□□□ 1.67
Cspg5-202ENSMUST00000196060 Golga3P55937 1487 aa25.48■■□□□ 1.67
Cspg5-202ENSMUST00000196060 Eid3Q3V124 375 aa25.48■■□□□ 1.67
Cspg5-202ENSMUST00000196060 Smarca2Q6DIC0 1577 aa25.42■■□□□ 1.66
Cspg5-202ENSMUST00000196060 Cecr2E9Q2Z1 1453 aa25.42■■□□□ 1.66
Cspg5-202ENSMUST00000196060 Ube2uB1AUC4 352 aa25.4■■□□□ 1.66
Cspg5-202ENSMUST00000196060 Mapk8ip2Q9ERE9 830 aa25.4■■□□□ 1.66
Cspg5-202ENSMUST00000196060 ClspnQ80YR7 1315 aa25.35■■□□□ 1.65
Cspg5-202ENSMUST00000196060 Anks4bQ8K3X6 423 aa25.31■■□□□ 1.64
Cspg5-202ENSMUST00000196060 Fam50aQ9WV03 339 aaKnown RBP25.27■■□□□ 1.64
Cspg5-202ENSMUST00000196060 1700123L14RikQ3V2K7 440 aa25.26■■□□□ 1.63
Cspg5-202ENSMUST00000196060 CenpbP27790 599 aa25.25■■□□□ 1.63
Cspg5-202ENSMUST00000196060 Clip1Q922J3 1391 aa25.21■■□□□ 1.63
Cspg5-202ENSMUST00000196060 Slc24a1Q91WD8 1130 aa25.2■■□□□ 1.63
Cspg5-202ENSMUST00000196060 Sycp2Q9CUU3 1500 aa25.17■■□□□ 1.62
Cspg5-202ENSMUST00000196060 Lmod2Q3UHZ5 550 aa25.11■■□□□ 1.61
Cspg5-202ENSMUST00000196060 Crybg2B7ZCC2 1516 aa25.08■■□□□ 1.6
Cspg5-202ENSMUST00000196060 NclP09405 707 aaKnown RBP25.06■■□□□ 1.6
Cspg5-202ENSMUST00000196060 Synj1Q8CHC4 1574 aa25.05■■□□□ 1.6
Cspg5-202ENSMUST00000196060 CftrP26361 1476 aa24.94■■□□□ 1.58
Cspg5-202ENSMUST00000196060 Cep162Q6ZQ06 1403 aa24.81■■□□□ 1.56
Cspg5-202ENSMUST00000196060 Rapgef2Q8CHG7 1496 aa24.75■■□□□ 1.55
Cspg5-202ENSMUST00000196060 Aplp2Q06335 707 aa24.72■■□□□ 1.55
Cspg5-202ENSMUST00000196060 SafbD3YXK2 937 aaKnown RBP24.66■■□□□ 1.54
Cspg5-202ENSMUST00000196060 Eif5bQ05D44 1216 aaKnown RBP24.65■■□□□ 1.54
Cspg5-202ENSMUST00000196060 Setd5Q5XJV7 1441 aa24.64■■□□□ 1.54
Cspg5-202ENSMUST00000196060 BlmO88700 1416 aa24.59■■□□□ 1.53
Cspg5-202ENSMUST00000196060 Hnrnpul2Q00PI9 745 aaKnown RBP24.59■■□□□ 1.53
Cspg5-202ENSMUST00000196060 Tnnt3Q9QZ47 272 aa24.57■■□□□ 1.52
Cspg5-202ENSMUST00000196060 Fmn1Q05860 1466 aa24.56■■□□□ 1.52
Cspg5-202ENSMUST00000196060 Stra8P70278 393 aa24.55■■□□□ 1.52
Cspg5-202ENSMUST00000196060 Cc2d2aQ8CFW7 1633 aa24.51■■□□□ 1.51
Cspg5-202ENSMUST00000196060 Npm1Q61937 292 aaKnown RBP24.48■■□□□ 1.51
Cspg5-202ENSMUST00000196060 Chic2Q9D9G3 165 aa24.46■■□□□ 1.51
Cspg5-202ENSMUST00000196060 Eea1Q8BL66 1411 aa24.45■■□□□ 1.51
Cspg5-202ENSMUST00000196060 Kif15Q6P9L6 1387 aa24.42■■□□□ 1.5
Cspg5-202ENSMUST00000196060 Fam71e1A1L3C1 212 aa24.38■■□□□ 1.49
Cspg5-202ENSMUST00000196060 Cttnbp2B9EJA2 1648 aa24.36■■□□□ 1.49
Cspg5-202ENSMUST00000196060 BicraF8VPZ9 1578 aa24.36■■□□□ 1.49
Cspg5-202ENSMUST00000196060 Hspa5P20029 655 aaKnown RBP24.34■■□□□ 1.49
Cspg5-202ENSMUST00000196060 Smarca4Q3TKT4 1613 aaKnown RBP24.27■■□□□ 1.48
Cspg5-202ENSMUST00000196060 Top2bQ64511 1612 aa24.22■■□□□ 1.47
Cspg5-202ENSMUST00000196060 NrdcQ8BHG1 1161 aa24.21■■□□□ 1.47
Cspg5-202ENSMUST00000196060 Sin3aQ60520 1274 aaKnown RBP24.21■■□□□ 1.47
Cspg5-202ENSMUST00000196060 Ttbk1Q6PCN3 1308 aa24.2■■□□□ 1.46
Cspg5-202ENSMUST00000196060 Ubl4bQ9CQ84 188 aa24.2■■□□□ 1.46
Cspg5-202ENSMUST00000196060 Top2aQ01320 1528 aaKnown RBP24.2■■□□□ 1.46
Cspg5-202ENSMUST00000196060 Myt1Q8CFC2 1127 aa24.19■■□□□ 1.46
Cspg5-202ENSMUST00000196060 Zbtb7cQ8VCZ7 619 aa24.19■■□□□ 1.46
Cspg5-202ENSMUST00000196060 Zbtb4Q5F293 982 aa24.16■■□□□ 1.46
Cspg5-202ENSMUST00000196060 Calr4Q3TQS0 420 aa24.15■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms