RNA–Protein interactions for RNA: ENSMUST00000192409.1

Pcdhb22-202, Transcript of Protocadherin beta 22, mousemouse

APPRIS P1 BASIC

Gene Pcdhb22, Length 6,609 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22-202ENSMUST00000192409 Rhox8Q6VSS7 320 aa22.03■■□□□ 1.12
Pcdhb22-202ENSMUST00000192409 Ehmt2Q9Z148 1263 aaKnown RBP20.03■□□□□ 0.8
Pcdhb22-202ENSMUST00000192409 Ube2uB1AUC4 352 aa19.74■□□□□ 0.75
Pcdhb22-202ENSMUST00000192409 Esf1Q3V1V3 845 aaKnown RBP19.63■□□□□ 0.73
Pcdhb22-202ENSMUST00000192409 Cngb1E1AZ71 1325 aa19.57■□□□□ 0.72
Pcdhb22-202ENSMUST00000192409 Zeb1Q64318 1117 aa19.53■□□□□ 0.72
Pcdhb22-202ENSMUST00000192409 Ccdc136Q3TVA9 1136 aa19.46■□□□□ 0.71
Pcdhb22-202ENSMUST00000192409 Wdr66E9Q743 1299 aa19.39■□□□□ 0.69
Pcdhb22-202ENSMUST00000192409 Gab3Q8BSM5 595 aa19.28■□□□□ 0.68
Pcdhb22-202ENSMUST00000192409 Npm2Q80W85 207 aa19.21■□□□□ 0.67
Pcdhb22-202ENSMUST00000192409 Myt1lP97500 1187 aa19.11■□□□□ 0.65
Pcdhb22-202ENSMUST00000192409 Las1lA2BE28 776 aaKnown RBP19.06■□□□□ 0.64
Pcdhb22-202ENSMUST00000192409 Pelp1Q9DBD5 1123 aaKnown RBP18.72■□□□□ 0.59
Pcdhb22-202ENSMUST00000192409 Rpgrip1Q9EPQ2 1331 aa18.67■□□□□ 0.58
Pcdhb22-202ENSMUST00000192409 Slc24a1Q91WD8 1130 aa18.65■□□□□ 0.58
Pcdhb22-202ENSMUST00000192409 Il27Q8K3I6 234 aa18.52■□□□□ 0.56
Pcdhb22-202ENSMUST00000192409 Trim41Q5NCC3 630 aa18.49■□□□□ 0.55
Pcdhb22-202ENSMUST00000192409 Amer1Q7TS75 1132 aa18.48■□□□□ 0.55
Pcdhb22-202ENSMUST00000192409 UbtfP25976 765 aaKnown RBP18.44■□□□□ 0.54
Pcdhb22-202ENSMUST00000192409 Ap3b1Q9Z1T1 1105 aa18.25■□□□□ 0.51
Pcdhb22-202ENSMUST00000192409 Neurod1Q60867 357 aa18.23■□□□□ 0.51
Pcdhb22-202ENSMUST00000192409 Os9Q8K2C7 672 aa18.21■□□□□ 0.51
Pcdhb22-202ENSMUST00000192409 Zbtb7cQ8VCZ7 619 aa18.05■□□□□ 0.48
Pcdhb22-202ENSMUST00000192409 Ifnlr1Q8CGK5 535 aa18.04■□□□□ 0.48
Pcdhb22-202ENSMUST00000192409 Plppr3Q7TPB0 716 aa18■□□□□ 0.47
Pcdhb22-202ENSMUST00000192409 Ttbk1Q6PCN3 1308 aa17.99■□□□□ 0.47
Pcdhb22-202ENSMUST00000192409 Fam50aQ9WV03 339 aaKnown RBP17.99■□□□□ 0.47
Pcdhb22-202ENSMUST00000192409 Chic1Q8CBW7 227 aa17.98■□□□□ 0.47
Pcdhb22-202ENSMUST00000192409 HrcG5E8J6 738 aa17.98■□□□□ 0.47
Pcdhb22-202ENSMUST00000192409 Ppargc1bQ8VHJ7 1014 aa17.89■□□□□ 0.45
Pcdhb22-202ENSMUST00000192409 Eif5bQ05D44 1216 aaKnown RBP17.88■□□□□ 0.45
Pcdhb22-202ENSMUST00000192409 Gm13697A2AK42 830 aa17.86■□□□□ 0.45
Pcdhb22-202ENSMUST00000192409 Stra8P70278 393 aa17.74■□□□□ 0.43
Pcdhb22-202ENSMUST00000192409 Gm35339A0A140LHH9 1649 aa17.73■□□□□ 0.43
Pcdhb22-202ENSMUST00000192409 CenpbP27790 599 aa17.71■□□□□ 0.43
Pcdhb22-202ENSMUST00000192409 NrdcQ8BHG1 1161 aa17.71■□□□□ 0.42
Pcdhb22-202ENSMUST00000192409 NclP09405 707 aaKnown RBP17.7■□□□□ 0.42
Pcdhb22-202ENSMUST00000192409 Zbtb4Q5F293 982 aa17.69■□□□□ 0.42
Pcdhb22-202ENSMUST00000192409 Hnrnpul2Q00PI9 745 aaKnown RBP17.68■□□□□ 0.42
Pcdhb22-202ENSMUST00000192409 Atp1b4Q99ME6 356 aa17.66■□□□□ 0.42
Pcdhb22-202ENSMUST00000192409 Prdm10Q3UTQ7 1184 aa17.64■□□□□ 0.41
Pcdhb22-202ENSMUST00000192409 4933416C03RikQ3V063 378 aa17.64■□□□□ 0.41
Pcdhb22-202ENSMUST00000192409 Anp32bQ9EST5 272 aaKnown RBP17.64■□□□□ 0.41
Pcdhb22-202ENSMUST00000192409 NischQ80TM9 1593 aa17.64■□□□□ 0.41
Pcdhb22-202ENSMUST00000192409 4930567H17RikQ3V0K5 233 aa17.58■□□□□ 0.4
Pcdhb22-202ENSMUST00000192409 NeflP08551 543 aa17.57■□□□□ 0.4
Pcdhb22-202ENSMUST00000192409 NefmP08553 848 aa17.57■□□□□ 0.4
Pcdhb22-202ENSMUST00000192409 Abcc9P70170 1546 aa17.55■□□□□ 0.4
Pcdhb22-202ENSMUST00000192409 Erich6D3Z6S9 713 aa17.55■□□□□ 0.4
Pcdhb22-202ENSMUST00000192409 Gm13695A2AK44 830 aa17.48■□□□□ 0.39
Pcdhb22-202ENSMUST00000192409 Lmod2Q3UHZ5 550 aa17.48■□□□□ 0.39
Pcdhb22-202ENSMUST00000192409 Fkbp15Q6P9Q6 1216 aaKnown RBP17.46■□□□□ 0.39
Pcdhb22-202ENSMUST00000192409 Zcchc6Q5BLK4 1491 aaKnown RBP17.4■□□□□ 0.38
Pcdhb22-202ENSMUST00000192409 Acin1Q9JIX8 1338 aaKnown RBP17.37■□□□□ 0.37
Pcdhb22-202ENSMUST00000192409 Cdk11bP24788 784 aaKnown RBP17.36■□□□□ 0.37
Pcdhb22-202ENSMUST00000192409 Polr3glQ8R0C0 218 aa17.33■□□□□ 0.36
Pcdhb22-202ENSMUST00000192409 Npm1Q61937 292 aaKnown RBP17.32■□□□□ 0.36
Pcdhb22-202ENSMUST00000192409 Rangap1P46061 589 aaKnown RBP17.28■□□□□ 0.36
Pcdhb22-202ENSMUST00000192409 DiexfQ8BTT6 772 aaKnown RBP17.25■□□□□ 0.35
Pcdhb22-202ENSMUST00000192409 Nlrp6Q91WS2 869 aa17.21■□□□□ 0.35
Pcdhb22-202ENSMUST00000192409 ArxO35085 564 aa17.2■□□□□ 0.34
Pcdhb22-202ENSMUST00000192409 Nop58Q6DFW4 536 aaKnown RBP17.15■□□□□ 0.34
Pcdhb22-202ENSMUST00000192409 Mapk8ip2Q9ERE9 830 aa17.15■□□□□ 0.34
Pcdhb22-202ENSMUST00000192409 Plekhg3Q4VAC9 1341 aa17.15■□□□□ 0.34
Pcdhb22-202ENSMUST00000192409 TonslQ6NZL6 1363 aa17.11■□□□□ 0.33
Pcdhb22-202ENSMUST00000192409 Safb2Q80YR5 991 aaKnown RBP17.07■□□□□ 0.32
Pcdhb22-202ENSMUST00000192409 Tnnt3Q9QZ47 272 aa16.95■□□□□ 0.3
Pcdhb22-202ENSMUST00000192409 P3h3Q8CG70 732 aa16.95■□□□□ 0.3
Pcdhb22-202ENSMUST00000192409 Csrnp3P59055 597 aa16.91■□□□□ 0.3
Pcdhb22-202ENSMUST00000192409 Irx6Q9ER75 438 aa16.89■□□□□ 0.29
Pcdhb22-202ENSMUST00000192409 Mier1Q5UAK0 511 aa16.89■□□□□ 0.29
Pcdhb22-202ENSMUST00000192409 Ccdc180J3QNE4 1664 aa16.86■□□□□ 0.29
Pcdhb22-202ENSMUST00000192409 Pcgf6Q99NA9 353 aa16.84■□□□□ 0.29
Pcdhb22-202ENSMUST00000192409 Supt5hO55201 1082 aaKnown RBP16.82■□□□□ 0.28
Pcdhb22-202ENSMUST00000192409 Eid3Q3V124 375 aa16.82■□□□□ 0.28
Pcdhb22-202ENSMUST00000192409 DaxxO35613 739 aa16.79■□□□□ 0.28
Pcdhb22-202ENSMUST00000192409 Ubl4bQ9CQ84 188 aa16.73■□□□□ 0.27
Pcdhb22-202ENSMUST00000192409 MyclP10166 368 aa16.71■□□□□ 0.27
Pcdhb22-202ENSMUST00000192409 Rad21Q61550 635 aaKnown RBP16.7■□□□□ 0.26
Pcdhb22-202ENSMUST00000192409 Trim26Q99PN3 545 aa16.69■□□□□ 0.26
Pcdhb22-202ENSMUST00000192409 Chic2Q9D9G3 165 aa16.68■□□□□ 0.26
Pcdhb22-202ENSMUST00000192409 Ythdc1E9Q5K9 736 aaKnown RBP16.67■□□□□ 0.26
Pcdhb22-202ENSMUST00000192409 Gm38655A0A286YDK6 273 aa16.67■□□□□ 0.26
Pcdhb22-202ENSMUST00000192409 Myt1Q8CFC2 1127 aa16.65■□□□□ 0.26
Pcdhb22-202ENSMUST00000192409 Rtn4Q99P72 1162 aaKnown RBP16.63■□□□□ 0.25
Pcdhb22-202ENSMUST00000192409 Vsig10D3YX43 558 aa16.63■□□□□ 0.25
Pcdhb22-202ENSMUST00000192409 Hdac5Q9Z2V6 1113 aa16.63■□□□□ 0.25
Pcdhb22-202ENSMUST00000192409 CatipB9EKE5 520 aa16.6■□□□□ 0.25
Pcdhb22-202ENSMUST00000192409 NgefQ8CHT1 710 aa16.57■□□□□ 0.24
Pcdhb22-202ENSMUST00000192409 Clstn1Q9EPL2 979 aa16.56■□□□□ 0.24
Pcdhb22-202ENSMUST00000192409 Hsp90aa1P07901 733 aaKnown RBP16.56■□□□□ 0.24
Pcdhb22-202ENSMUST00000192409 Fgd1P52734 960 aa16.53■□□□□ 0.24
Pcdhb22-202ENSMUST00000192409 Znf326O88291 580 aa16.51■□□□□ 0.23
Pcdhb22-202ENSMUST00000192409 Rtl1Q7M732 1744 aa16.49■□□□□ 0.23
Pcdhb22-202ENSMUST00000192409 Lmod3E9QA62 571 aa16.45■□□□□ 0.22
Pcdhb22-202ENSMUST00000192409 DekQ7TNV0 380 aaKnown RBP16.41■□□□□ 0.22
Pcdhb22-202ENSMUST00000192409 Clip1Q922J3 1391 aa16.4■□□□□ 0.22
Pcdhb22-202ENSMUST00000192409 Arid4bA2CG63 1314 aaKnown RBP16.4■□□□□ 0.22
Pcdhb22-202ENSMUST00000192409 Upf2A2AT37 1269 aaKnown RBP16.38■□□□□ 0.21
Pcdhb22-202ENSMUST00000192409 Kdm2aP59997 1161 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 104.5 ms