RNA–Protein interactions for RNA: ENSMUST00000187964.1

Gm28554-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28554, Length 174 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28554-201ENSMUST00000187964 Gm35339A0A140LHH9 1649 aa12.77□□□□□ -0.37
Gm28554-201ENSMUST00000187964 NischQ80TM9 1593 aa12.51□□□□□ -0.41
Gm28554-201ENSMUST00000187964 Abcc8B2RUS7 1588 aa12.13□□□□□ -0.47
Gm28554-201ENSMUST00000187964 Abcc9P70170 1546 aa12.13□□□□□ -0.47
Gm28554-201ENSMUST00000187964 ScribQ80U72 1612 aa11.86□□□□□ -0.51
Gm28554-201ENSMUST00000187964 Kdm5dQ62240 1548 aa11.39□□□□□ -0.59
Gm28554-201ENSMUST00000187964 NacadQ5SWP3 1504 aa11.32□□□□□ -0.6
Gm28554-201ENSMUST00000187964 Sycp2Q9CUU3 1500 aa11.14□□□□□ -0.63
Gm28554-201ENSMUST00000187964 Dcaf1Q80TR8 1506 aa11.12□□□□□ -0.63
Gm28554-201ENSMUST00000187964 BicraF8VPZ9 1578 aa11.08□□□□□ -0.64
Gm28554-201ENSMUST00000187964 Dnajc5bQ9CQ94 199 aa10.93□□□□□ -0.66
Gm28554-201ENSMUST00000187964 Rb1cc1Q9ESK9 1588 aa10.93□□□□□ -0.66
Gm28554-201ENSMUST00000187964 Baz1aO88379 1555 aa10.73□□□□□ -0.69
Gm28554-201ENSMUST00000187964 Thoc2B1AZI6 1594 aaKnown RBP10.72□□□□□ -0.69
Gm28554-201ENSMUST00000187964 Ccdc180J3QNE4 1664 aa10.66□□□□□ -0.7
Gm28554-201ENSMUST00000187964 Rhox8Q6VSS7 320 aa10.65□□□□□ -0.7
Gm28554-201ENSMUST00000187964 Pds5bQ4VA53 1446 aaKnown RBP10.64□□□□□ -0.71
Gm28554-201ENSMUST00000187964 Zcchc6Q5BLK4 1491 aaKnown RBP10.6□□□□□ -0.71
Gm28554-201ENSMUST00000187964 Crybg2B7ZCC2 1516 aa10.58□□□□□ -0.72
Gm28554-201ENSMUST00000187964 Cc2d2aQ8CFW7 1633 aa10.54□□□□□ -0.72
Gm28554-201ENSMUST00000187964 Atad2bE9Q166 1460 aaKnown RBP10.54□□□□□ -0.72
Gm28554-201ENSMUST00000187964 Cecr2E9Q2Z1 1453 aa10.48□□□□□ -0.73
Gm28554-201ENSMUST00000187964 Smarca4Q3TKT4 1613 aaKnown RBP10.47□□□□□ -0.73
Gm28554-201ENSMUST00000187964 Smarca2Q6DIC0 1577 aa10.47□□□□□ -0.73
Gm28554-201ENSMUST00000187964 Iqgap2Q3UQ44 1575 aa10.45□□□□□ -0.74
Gm28554-201ENSMUST00000187964 Ercc6F8VPZ5 1481 aa10.45□□□□□ -0.74
Gm28554-201ENSMUST00000187964 Fam135aQ6NS59 1506 aa10.42□□□□□ -0.74
Gm28554-201ENSMUST00000187964 Wdr62Q3U3T8 1523 aa10.38□□□□□ -0.75
Gm28554-201ENSMUST00000187964 Frmpd1A2AKB4 1549 aa10.35□□□□□ -0.75
Gm28554-201ENSMUST00000187964 Unc13aQ4KUS2 1712 aa10.33□□□□□ -0.76
Gm28554-201ENSMUST00000187964 Phldb1Q6PDH0 1371 aaKnown RBP10.22□□□□□ -0.77
Gm28554-201ENSMUST00000187964 Synj1Q8CHC4 1574 aa10.19□□□□□ -0.78
Gm28554-201ENSMUST00000187964 Rtl1Q7M732 1744 aa10.18□□□□□ -0.78
Gm28554-201ENSMUST00000187964 Cttnbp2B9EJA2 1648 aa10.16□□□□□ -0.78
Gm28554-201ENSMUST00000187964 CftrP26361 1476 aa10.15□□□□□ -0.78
Gm28554-201ENSMUST00000187964 Mrc2Q64449 1479 aa10.13□□□□□ -0.79
Gm28554-201ENSMUST00000187964 Ubl4bQ9CQ84 188 aa10.13□□□□□ -0.79
Gm28554-201ENSMUST00000187964 Baz1bQ9Z277 1479 aa10.1□□□□□ -0.79
Gm28554-201ENSMUST00000187964 Ccdc136Q3TVA9 1136 aa10.02□□□□□ -0.81
Gm28554-201ENSMUST00000187964 Lrriq1Q0P5X1 1673 aa10.01□□□□□ -0.81
Gm28554-201ENSMUST00000187964 Brd4Q9ESU6 1400 aaKnown RBP10□□□□□ -0.81
Gm28554-201ENSMUST00000187964 Kif21aQ9QXL2 1672 aa9.99□□□□□ -0.81
Gm28554-201ENSMUST00000187964 Trim41Q5NCC3 630 aa9.95□□□□□ -0.82
Gm28554-201ENSMUST00000187964 Cux2P70298 1426 aa9.92□□□□□ -0.82
Gm28554-201ENSMUST00000187964 Kif15Q6P9L6 1387 aa9.9□□□□□ -0.82
Gm28554-201ENSMUST00000187964 Lamc3Q9R0B6 1581 aa9.88□□□□□ -0.83
Gm28554-201ENSMUST00000187964 Rsf1E9PWW9 1441 aaKnown RBP9.88□□□□□ -0.83
Gm28554-201ENSMUST00000187964 Esf1Q3V1V3 845 aaKnown RBP9.87□□□□□ -0.83
Gm28554-201ENSMUST00000187964 Dnajc5P60904 198 aa9.85□□□□□ -0.83
Gm28554-201ENSMUST00000187964 Eif4g3Q80XI3 1579 aaKnown RBP9.83□□□□□ -0.84
Gm28554-201ENSMUST00000187964 TnnQ80Z71 1560 aa9.79□□□□□ -0.84
Gm28554-201ENSMUST00000187964 Urb2E9Q7L1 1524 aaKnown RBP9.77□□□□□ -0.84
Gm28554-201ENSMUST00000187964 Top2bQ64511 1612 aa9.77□□□□□ -0.85
Gm28554-201ENSMUST00000187964 Plb1Q3TTY0 1478 aa9.73□□□□□ -0.85
Gm28554-201ENSMUST00000187964 Cep164Q5DU05 1446 aa9.73□□□□□ -0.85
Gm28554-201ENSMUST00000187964 Camsap1A2AHC3 1581 aa9.72□□□□□ -0.85
Gm28554-201ENSMUST00000187964 Npm1Q61937 292 aaKnown RBP9.72□□□□□ -0.85
Gm28554-201ENSMUST00000187964 Crocc2F6XLV1 1638 aa9.71□□□□□ -0.85
Gm28554-201ENSMUST00000187964 Il27Q8K3I6 234 aa9.71□□□□□ -0.86
Gm28554-201ENSMUST00000187964 Dhx29Q6PGC1 1365 aaKnown RBP9.71□□□□□ -0.86
Gm28554-201ENSMUST00000187964 Shroom2A2ALU4 1481 aa9.68□□□□□ -0.86
Gm28554-201ENSMUST00000187964 Golga3P55937 1487 aa9.68□□□□□ -0.86
Gm28554-201ENSMUST00000187964 Cngb1E1AZ71 1325 aa9.65□□□□□ -0.86
Gm28554-201ENSMUST00000187964 Ccdc18Q640L5 1455 aa9.65□□□□□ -0.87
Gm28554-201ENSMUST00000187964 Rusc2Q80U22 1514 aa9.64□□□□□ -0.87
Gm28554-201ENSMUST00000187964 LrpprcQ6PB66 1392 aaKnown RBP9.63□□□□□ -0.87
Gm28554-201ENSMUST00000187964 Col17a1Q07563 1470 aa9.62□□□□□ -0.87
Gm28554-201ENSMUST00000187964 PogzQ8BZH4 1409 aaKnown RBP9.61□□□□□ -0.87
Gm28554-201ENSMUST00000187964 Setd1bQ8CFT2 1985 aa9.59□□□□□ -0.87
Gm28554-201ENSMUST00000187964 Fmn1Q05860 1466 aa9.59□□□□□ -0.87
Gm28554-201ENSMUST00000187964 Samd9lQ69Z37 1561 aa9.58□□□□□ -0.88
Gm28554-201ENSMUST00000187964 Ift140E9PY46 1464 aa9.57□□□□□ -0.88
Gm28554-201ENSMUST00000187964 Duox2A2AQ99 1517 aa9.56□□□□□ -0.88
Gm28554-201ENSMUST00000187964 Disp1Q3TDN0 1521 aa9.55□□□□□ -0.88
Gm28554-201ENSMUST00000187964 Grin2bQ01097 1482 aa9.54□□□□□ -0.88
Gm28554-201ENSMUST00000187964 Pabpn1Q8CCS6 302 aaKnown RBP9.52□□□□□ -0.89
Gm28554-201ENSMUST00000187964 Pelp1Q9DBD5 1123 aaKnown RBP9.51□□□□□ -0.89
Gm28554-201ENSMUST00000187964 Pbrm1Q8BSQ9 1634 aaKnown RBP9.49□□□□□ -0.89
Gm28554-201ENSMUST00000187964 Nup160Q9Z0W3 1402 aaKnown RBP9.49□□□□□ -0.89
Gm28554-201ENSMUST00000187964 Ccdc88bQ4QRL3 1481 aa9.49□□□□□ -0.89
Gm28554-201ENSMUST00000187964 Rad54l2Q99NG0 1466 aa9.49□□□□□ -0.89
Gm28554-201ENSMUST00000187964 Magi3Q9EQJ9 1476 aa9.47□□□□□ -0.89
Gm28554-201ENSMUST00000187964 Zcchc11B2RX14 1644 aaKnown RBP9.45□□□□□ -0.9
Gm28554-201ENSMUST00000187964 Grin2aP35436 1464 aa9.44□□□□□ -0.9
Gm28554-201ENSMUST00000187964 Top2aQ01320 1528 aaKnown RBP9.43□□□□□ -0.9
Gm28554-201ENSMUST00000187964 PtprkP35822 1457 aa9.42□□□□□ -0.9
Gm28554-201ENSMUST00000187964 AqrQ8CFQ3 1481 aaKnown RBP9.41□□□□□ -0.9
Gm28554-201ENSMUST00000187964 Cc2d2bA0A286YDU8 1405 aa9.41□□□□□ -0.9
Gm28554-201ENSMUST00000187964 Pla2r1Q62028 1487 aa9.4□□□□□ -0.9
Gm28554-201ENSMUST00000187964 Cep170Q6A065 1588 aa9.4□□□□□ -0.9
Gm28554-201ENSMUST00000187964 Efcab5A0JP43 1406 aa9.39□□□□□ -0.91
Gm28554-201ENSMUST00000187964 Adgrl3Q80TS3 1537 aa9.39□□□□□ -0.91
Gm28554-201ENSMUST00000187964 Gpatch8A2A6A1 1505 aa9.38□□□□□ -0.91
Gm28554-201ENSMUST00000187964 Chic1Q8CBW7 227 aa9.38□□□□□ -0.91
Gm28554-201ENSMUST00000187964 SynmQ70IV5 1561 aa9.37□□□□□ -0.91
Gm28554-201ENSMUST00000187964 Shroom4Q1W617 1475 aa9.36□□□□□ -0.91
Gm28554-201ENSMUST00000187964 Gapvd1Q6PAR5 1458 aa9.36□□□□□ -0.91
Gm28554-201ENSMUST00000187964 NrkQ9R0G8 1455 aa9.36□□□□□ -0.91
Gm28554-201ENSMUST00000187964 Pcdh10E9PXQ7 1057 aa9.36□□□□□ -0.91
Gm28554-201ENSMUST00000187964 Chd1P40201 1711 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms