RNA–Protein interactions for RNA: ENSMUST00000176778.7

Cux1-212, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cux1, Length 5,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-212ENSMUST00000176778 Rhox8Q6VSS7 320 aa26.98■■□□□ 1.91
Cux1-212ENSMUST00000176778 NischQ80TM9 1593 aa26.1■■□□□ 1.77
Cux1-212ENSMUST00000176778 Abcc9P70170 1546 aa24.72■■□□□ 1.55
Cux1-212ENSMUST00000176778 Abcc8B2RUS7 1588 aa24.35■■□□□ 1.49
Cux1-212ENSMUST00000176778 Gm35339A0A140LHH9 1649 aa24.21■■□□□ 1.47
Cux1-212ENSMUST00000176778 Rpgrip1Q9EPQ2 1331 aa24.13■■□□□ 1.45
Cux1-212ENSMUST00000176778 Ehmt2Q9Z148 1263 aaKnown RBP24.1■■□□□ 1.45
Cux1-212ENSMUST00000176778 Ccdc136Q3TVA9 1136 aa24.07■■□□□ 1.44
Cux1-212ENSMUST00000176778 Esf1Q3V1V3 845 aaKnown RBP24.01■■□□□ 1.43
Cux1-212ENSMUST00000176778 Trim41Q5NCC3 630 aa23.98■■□□□ 1.43
Cux1-212ENSMUST00000176778 Cngb1E1AZ71 1325 aa23.94■■□□□ 1.42
Cux1-212ENSMUST00000176778 Ube2uB1AUC4 352 aa23.89■■□□□ 1.42
Cux1-212ENSMUST00000176778 Wdr66E9Q743 1299 aa23.73■■□□□ 1.39
Cux1-212ENSMUST00000176778 Pelp1Q9DBD5 1123 aaKnown RBP23.71■■□□□ 1.39
Cux1-212ENSMUST00000176778 Zeb1Q64318 1117 aa23.69■■□□□ 1.38
Cux1-212ENSMUST00000176778 Las1lA2BE28 776 aaKnown RBP23.66■■□□□ 1.38
Cux1-212ENSMUST00000176778 Npm2Q80W85 207 aa23.46■■□□□ 1.35
Cux1-212ENSMUST00000176778 Zcchc6Q5BLK4 1491 aaKnown RBP23.44■■□□□ 1.34
Cux1-212ENSMUST00000176778 Gab3Q8BSM5 595 aa23.43■■□□□ 1.34
Cux1-212ENSMUST00000176778 Myt1lP97500 1187 aa23.2■■□□□ 1.3
Cux1-212ENSMUST00000176778 Rtl1Q7M732 1744 aa23.16■■□□□ 1.3
Cux1-212ENSMUST00000176778 NacadQ5SWP3 1504 aa23.09■■□□□ 1.29
Cux1-212ENSMUST00000176778 Ccdc180J3QNE4 1664 aa22.99■■□□□ 1.27
Cux1-212ENSMUST00000176778 Rb1cc1Q9ESK9 1588 aa22.88■■□□□ 1.25
Cux1-212ENSMUST00000176778 HrcG5E8J6 738 aa22.74■■□□□ 1.23
Cux1-212ENSMUST00000176778 Dcaf1Q80TR8 1506 aa22.7■■□□□ 1.22
Cux1-212ENSMUST00000176778 Il27Q8K3I6 234 aa22.67■■□□□ 1.22
Cux1-212ENSMUST00000176778 Amer1Q7TS75 1132 aa22.61■■□□□ 1.21
Cux1-212ENSMUST00000176778 Stra8P70278 393 aa22.58■■□□□ 1.21
Cux1-212ENSMUST00000176778 Brd4Q9ESU6 1400 aaKnown RBP22.58■■□□□ 1.21
Cux1-212ENSMUST00000176778 Kdm5dQ62240 1548 aa22.57■■□□□ 1.2
Cux1-212ENSMUST00000176778 UbtfP25976 765 aaKnown RBP22.54■■□□□ 1.2
Cux1-212ENSMUST00000176778 Slc24a1Q91WD8 1130 aa22.53■■□□□ 1.2
Cux1-212ENSMUST00000176778 Baz1aO88379 1555 aa22.5■■□□□ 1.19
Cux1-212ENSMUST00000176778 Npm1Q61937 292 aaKnown RBP22.38■■□□□ 1.17
Cux1-212ENSMUST00000176778 CenpbP27790 599 aa22.33■■□□□ 1.17
Cux1-212ENSMUST00000176778 NefmP08553 848 aa22.32■■□□□ 1.16
Cux1-212ENSMUST00000176778 Anp32bQ9EST5 272 aaKnown RBP22.22■■□□□ 1.15
Cux1-212ENSMUST00000176778 Sycp2Q9CUU3 1500 aa22.15■■□□□ 1.14
Cux1-212ENSMUST00000176778 4930567H17RikQ3V0K5 233 aa22.14■■□□□ 1.14
Cux1-212ENSMUST00000176778 ScribQ80U72 1612 aa22.12■■□□□ 1.13
Cux1-212ENSMUST00000176778 Ubl4bQ9CQ84 188 aa22.11■■□□□ 1.13
Cux1-212ENSMUST00000176778 Os9Q8K2C7 672 aa22.08■■□□□ 1.13
Cux1-212ENSMUST00000176778 Ercc6F8VPZ5 1481 aa22.07■■□□□ 1.12
Cux1-212ENSMUST00000176778 Acin1Q9JIX8 1338 aaKnown RBP22.03■■□□□ 1.12
Cux1-212ENSMUST00000176778 Pds5bQ4VA53 1446 aaKnown RBP22.03■■□□□ 1.12
Cux1-212ENSMUST00000176778 Neurod1Q60867 357 aa22.03■■□□□ 1.12
Cux1-212ENSMUST00000176778 Ap3b1Q9Z1T1 1105 aa22■■□□□ 1.11
Cux1-212ENSMUST00000176778 Crybg2B7ZCC2 1516 aa22■■□□□ 1.11
Cux1-212ENSMUST00000176778 Fam50aQ9WV03 339 aaKnown RBP21.99■■□□□ 1.11
Cux1-212ENSMUST00000176778 NrdcQ8BHG1 1161 aa21.98■■□□□ 1.11
Cux1-212ENSMUST00000176778 NeflP08551 543 aa21.89■■□□□ 1.09
Cux1-212ENSMUST00000176778 Ttbk1Q6PCN3 1308 aa21.81■■□□□ 1.08
Cux1-212ENSMUST00000176778 Rsf1E9PWW9 1441 aaKnown RBP21.8■■□□□ 1.08
Cux1-212ENSMUST00000176778 NclP09405 707 aaKnown RBP21.8■■□□□ 1.08
Cux1-212ENSMUST00000176778 Cdk11bP24788 784 aaKnown RBP21.75■■□□□ 1.07
Cux1-212ENSMUST00000176778 4933416C03RikQ3V063 378 aa21.75■■□□□ 1.07
Cux1-212ENSMUST00000176778 Eif5bQ05D44 1216 aaKnown RBP21.73■■□□□ 1.07
Cux1-212ENSMUST00000176778 Golga3P55937 1487 aa21.69■■□□□ 1.06
Cux1-212ENSMUST00000176778 Cep164Q5DU05 1446 aa21.68■■□□□ 1.06
Cux1-212ENSMUST00000176778 Kif15Q6P9L6 1387 aa21.67■■□□□ 1.06
Cux1-212ENSMUST00000176778 Tnnt3Q9QZ47 272 aa21.61■■□□□ 1.05
Cux1-212ENSMUST00000176778 Gm13697A2AK42 830 aa21.6■■□□□ 1.05
Cux1-212ENSMUST00000176778 Atad2bE9Q166 1460 aaKnown RBP21.57■■□□□ 1.04
Cux1-212ENSMUST00000176778 Chic1Q8CBW7 227 aa21.56■■□□□ 1.04
Cux1-212ENSMUST00000176778 Zbtb7cQ8VCZ7 619 aa21.54■■□□□ 1.04
Cux1-212ENSMUST00000176778 Ccdc18Q640L5 1455 aa21.54■■□□□ 1.04
Cux1-212ENSMUST00000176778 Ppargc1bQ8VHJ7 1014 aa21.49■■□□□ 1.03
Cux1-212ENSMUST00000176778 Nop58Q6DFW4 536 aaKnown RBP21.45■■□□□ 1.02
Cux1-212ENSMUST00000176778 Smarca2Q6DIC0 1577 aa21.44■■□□□ 1.02
Cux1-212ENSMUST00000176778 Hnrnpul2Q00PI9 745 aaKnown RBP21.41■■□□□ 1.02
Cux1-212ENSMUST00000176778 Ifnlr1Q8CGK5 535 aa21.39■■□□□ 1.02
Cux1-212ENSMUST00000176778 Smarca4Q3TKT4 1613 aaKnown RBP21.36■■□□□ 1.01
Cux1-212ENSMUST00000176778 Phldb1Q6PDH0 1371 aaKnown RBP21.35■■□□□ 1.01
Cux1-212ENSMUST00000176778 CftrP26361 1476 aa21.34■■□□□ 1.01
Cux1-212ENSMUST00000176778 TonslQ6NZL6 1363 aa21.33■■□□□ 1.01
Cux1-212ENSMUST00000176778 Cecr2E9Q2Z1 1453 aa21.29■■□□□ 1
Cux1-212ENSMUST00000176778 Lmod2Q3UHZ5 550 aa21.28■■□□□ 1
Cux1-212ENSMUST00000176778 Clip1Q922J3 1391 aa21.28■■□□□ 1
Cux1-212ENSMUST00000176778 Atp1b4Q99ME6 356 aa21.26■□□□□ 0.99
Cux1-212ENSMUST00000176778 Fmn1Q05860 1466 aa21.2■□□□□ 0.98
Cux1-212ENSMUST00000176778 Hdac5Q9Z2V6 1113 aa21.2■□□□□ 0.98
Cux1-212ENSMUST00000176778 Erich6D3Z6S9 713 aa21.2■□□□□ 0.98
Cux1-212ENSMUST00000176778 Plekhg3Q4VAC9 1341 aa21.18■□□□□ 0.98
Cux1-212ENSMUST00000176778 Gm13695A2AK44 830 aa21.18■□□□□ 0.98
Cux1-212ENSMUST00000176778 Pcgf6Q99NA9 353 aa21.17■□□□□ 0.98
Cux1-212ENSMUST00000176778 Zbtb4Q5F293 982 aa21.17■□□□□ 0.98
Cux1-212ENSMUST00000176778 DiexfQ8BTT6 772 aaKnown RBP21.15■□□□□ 0.98
Cux1-212ENSMUST00000176778 Myt1Q8CFC2 1127 aa21.14■□□□□ 0.97
Cux1-212ENSMUST00000176778 Nlrp6Q91WS2 869 aa21.09■□□□□ 0.97
Cux1-212ENSMUST00000176778 Fkbp15Q6P9Q6 1216 aaKnown RBP21.09■□□□□ 0.97
Cux1-212ENSMUST00000176778 Cttnbp2B9EJA2 1648 aa21.09■□□□□ 0.97
Cux1-212ENSMUST00000176778 Iqgap2Q3UQ44 1575 aa21.08■□□□□ 0.97
Cux1-212ENSMUST00000176778 Synj1Q8CHC4 1574 aa21.08■□□□□ 0.96
Cux1-212ENSMUST00000176778 Prdm10Q3UTQ7 1184 aa21.07■□□□□ 0.96
Cux1-212ENSMUST00000176778 Cux2P70298 1426 aa21.06■□□□□ 0.96
Cux1-212ENSMUST00000176778 Plppr3Q7TPB0 716 aa21.06■□□□□ 0.96
Cux1-212ENSMUST00000176778 Rtl5Q5DTT4 599 aa21.03■□□□□ 0.96
Cux1-212ENSMUST00000176778 Setd5Q5XJV7 1441 aa21■□□□□ 0.95
Cux1-212ENSMUST00000176778 Polr3glQ8R0C0 218 aa20.99■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms